Featured
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Original Article |
Microbial nitrate-dependent cyclohexane degradation coupled with anaerobic ammonium oxidation
- Florin Musat
- , Heinz Wilkes
- & Friedrich Widdel
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Short Communication |
Serological and molecular characterization of Vibrio parahaemolyticus marine strains carrying pandemic genetic markers
- Greta Caburlotto
- , Micol Gennari
- & Maria M Lleo
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Original Article |
Freshwater Perkinsea and marine-freshwater colonizations revealed by pyrosequencing and phylogeny of environmental rDNA
- Jon Bråte
- , Ramiro Logares
- & Kamran Shalchian-Tabrizi
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Original Article |
The functional potential of high Arctic permafrost revealed by metagenomic sequencing, qPCR and microarray analyses
- Etienne Yergeau
- , Hervé Hogues
- & Charles W Greer
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Original Article |
Widespread homologous recombination within and between Streptomyces species
- James R Doroghazi
- & Daniel H Buckley
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Original Article |
Dissimilatory reduction of nitrate in seawater by a Methylophaga strain containing two highly divergent narG sequences
- Julie Auclair
- , François Lépine
- & Richard Villemur
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Original Article |
Metagenome of the Mediterranean deep chlorophyll maximum studied by direct and fosmid library 454 pyrosequencing
- Rohit Ghai
- , Ana-Belén Martin-Cuadrado
- & Francisco Rodriguez-Valera
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Original Article |
Significant CO2 fixation by small prymnesiophytes in the subtropical and tropical northeast Atlantic Ocean
- Ludwig Jardillier
- , Mikhail V Zubkov
- & David J Scanlan
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Original Article |
PtrA is required for coordinate regulation of gene expression during phosphate stress in a marine Synechococcus
- Martin Ostrowski
- , Sophie Mazard
- & Dave J Scanlan
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Original Article |
Complex array of endobionts in Petalomonas sphagnophila, a large heterotrophic euglenid protist from Sphagnum-dominated peatlands
- Eunsoo Kim
- , Jong Soo Park
- & John M Archibald
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Original Article |
Effects of soil type and farm management on soil ecological functional genes and microbial activities
- Jennifer R Reeve
- , Christopher W Schadt
- & John P Reganold
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Commentary |
Further limitations of phylogenetic group-specific probes used for detection of bacteria in environmental samples
- Jeremy J Barr
- , Linda L Blackall
- & Philip Bond
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Original Article |
Mesoscale eddies: hotspots of prokaryotic activity and differential community structure in the ocean
- Federico Baltar
- , Javier Arístegui
- & Gerhard J Herndl
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Original Article |
Bacterial diversity in rhizosphere soil from Antarctic vascular plants of Admiralty Bay, maritime Antarctica
- Lia C R S Teixeira
- , Raquel S Peixoto
- & Alexandre S Rosado
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Original Article |
Identification and transcriptional analysis of trans-DCE-producing reductive dehalogenases in Dehalococcoides species
- Wai Ling Chow
- , Dan Cheng
- & Jianzhong He
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Short Communication |
Average genome size: a potential source of bias in comparative metagenomics
- Bánk Beszteri
- , Ben Temperton
- & Stephen J Giovannoni
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Original Article |
Composition and genetic diversity of picoeukaryotes in subtropical coastal waters as revealed by 454 pyrosequencing
- Man Kit Cheung
- , Chun Hang Au
- & Chong Kim Wong
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Original Article |
Bacterial diversity in the oral cavity of 10 healthy individuals
- Elisabeth M Bik
- , Clara Davis Long
- & David A Relman
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Original Article |
Responses of microbial community functional structures to pilot-scale uranium in situ bioremediation
- Meiying Xu
- , Wei-Min Wu
- & Jizhong Zhou
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Original Article |
Metaproteogenomic analysis of a dominant green sulfur bacterium from Ace Lake, Antarctica
- Charmaine Ng
- , Matthew Z DeMaere
- & Ricardo Cavicchioli
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Original Article |
The obligate endobacteria of arbuscular mycorrhizal fungi are ancient heritable components related to the Mollicutes
- Maria Naumann
- , Arthur Schüßler
- & Paola Bonfante
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Original Article |
Diversity of active marine picoeukaryotes in the Eastern Mediterranean Sea unveiled using photosystem-II psbA transcripts
- Dikla Man-Aharonovich
- , Alon Philosof
- & Oded Béjà
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Short Communication |
Detection of multiple Bartonella species in digestive and reproductive tissues of fleas collected from sympatric mammals
- R Jory Brinkerhoff
- , Hidenori Kabeya
- & Soichi Maruyama
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Original Article |
Silica deposition and phenotypic changes to Thermus thermophilus cultivated in the presence of supersaturated silicia
- Satoru Iwai
- , Katsumi Doi
- & Seiya Ogata
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Original Article |
Nitrogen and phosphorus enrichment alter the composition of ammonia-oxidizing bacteria in salt marsh sediments
- Melissa D Lage
- , Heather E Reed
- & Jennifer BH Martiny
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Original Article |
Novel observations of Thiobacterium, a sulfur-storing Gammaproteobacterium producing gelatinous mats
- Stefanie Grünke
- , Anna Lichtschlag
- & Antje Boetius
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Original Article |
Development and quantitative analyses of a universal rRNA-subtraction protocol for microbial metatranscriptomics
- Frank J Stewart
- , Elizabeth A Ottesen
- & Edward F DeLong
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Original Article |
Disruption of root carbon transport into forest humus stimulates fungal opportunists at the expense of mycorrhizal fungi
- Björn D Lindahl
- , Wietse de Boer
- & Roger D Finlay
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Original Article |
Dating the cyanobacterial ancestor of the chloroplast
- Luisa I Falcón
- , Susana Magallón
- & Amanda Castillo
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Original Article |
Metagenomic insights into evolution of a heavy metal-contaminated groundwater microbial community
- Christopher L Hemme
- , Ye Deng
- & Jizhong Zhou
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Original Article |
Spatial structure and persistence of methanogen populations in humic bog lakes
- Kim Milferstedt
- , Nicholas D Youngblut
- & Rachel J Whitaker
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Original Article |
PANGEA: pipeline for analysis of next generation amplicons
- Adriana Giongo
- , David B Crabb
- & Eric W Triplett
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Original Article |
Bacteriochlorophyll and community structure of aerobic anoxygenic phototrophic bacteria in a particle-rich estuary
- Matthew T Cottrell
- , Josephine Ras
- & David L Kirchman
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Original Article |
A poke into the diversity and associations within human anterior nare microbial communities
- Melissa L Wos-Oxley
- , Iris Plumeier
- & Dietmar H Pieper
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Original Article |
Bacterial gene abundances as indicators of greenhouse gas emission in soils
- Sergio E Morales
- , Theodore Cosart
- & William E Holben
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Original Article |
Amorphous Ca-phosphate precursors for Ca-carbonate biominerals mediated by Chromohalobacter marismortui
- María Angustias Rivadeneyra
- , Agustín Martín-Algarra
- & José Daniel Martín-Ramos
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Commentary |
Anomalous energy yields in thermodynamic calculations: importance of accounting for pH-dependent organic acid speciation
- Jan Dolfing
- , Aiping Xu
- & Ian M Head
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Short Communication |
Microbial secondary succession in a chronosequence of chalk grasslands
- Eiko E Kuramae
- , Hannes A Gamper
- & George A Kowalchuk
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Winogradsky Review |
AMD biofilms: using model communities to study microbial evolution and ecological complexity in nature
- Vincent J Denef
- , Ryan S Mueller
- & Jillian F Banfield
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Original Article |
Site and plant species are important determinants of the Methylobacterium community composition in the plant phyllosphere
- Claudia Knief
- , Alban Ramette
- & Julia A Vorholt
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Original Article |
Fine-scale evolution: genomic, phenotypic and ecological differentiation in two coexisting Salinibacter ruber strains
- Arantxa Peña
- , Hanno Teeling
- & Josefa Antón
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Original Article |
Comparative metaproteomics reveals ocean-scale shifts in microbial nutrient utilization and energy transduction
- Robert M Morris
- , Brook L Nunn
- & Gabrielle Rocap
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Original Article |
Characterisation of microbial communities colonising the hyphal surfaces of arbuscular mycorrhizal fungi
- Tanja R Scheublin
- , Ian R Sanders
- & Jan Roelof van der Meer
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Original Article |
Distributions of putative aerobic methanotrophs in diverse pelagic marine environments
- Patricia L Tavormina
- , William Ussler III
- & Victoria J Orphan
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Original Article |
Viral and microbial community dynamics in four aquatic environments
- Beltran Rodriguez-Brito
- , LinLin Li
- & Forest Rohwer
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Original Article |
Developmental microbial ecology of the crop of the folivorous hoatzin
- Filipa Godoy-Vitorino
- , Katherine C Goldfarb
- & Maria G Domínguez-Bello
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Original Article |
Species sorting affects bacterioplankton community composition as determined by 16S rDNA and 16S rRNA fingerprints
- Jürg B Logue
- & Eva S Lindström
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Original Article |
Shifts in microbial community structure along an ecological gradient of hypersaline soils and sediments
- Emily B Hollister
- , Amanda S Engledow
- & Terry J Gentry
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Original Article |
Genome-wide analysis of diel gene expression in the unicellular N2-fixing cyanobacterium Crocosphaera watsonii WH 8501
- Tuo Shi
- , Irina Ilikchyan
- & Jonathan P Zehr
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