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Comment
| Open AccessMicrobial volatiles mediate bacterial evolutionary dynamics
- Muhammad Syamsu Rizaludin
- , Paolina Garbeva
- & Jie Hu
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Article |
Coevolution between marine Aeromonas and phages reveals temporal trade-off patterns of phage resistance and host population fitness
- Zhenhe Xu
- , Zihan Ding
- & Qin Liu
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Article
| Open AccessRegulatory fine-tuning of mcr-1 increases bacterial fitness and stabilises antibiotic resistance in agricultural settings
- Lois Ogunlana
- , Divjot Kaur
- & R. C. MacLean
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Article
| Open AccessHost and microbiome jointly contribute to environmental adaptation
- Carola Petersen
- , Inga K. Hamerich
- & Hinrich Schulenburg
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Article |
Physiological and evolutionary contexts of a new symbiotic species from the nitrogen-recycling gut community of turtle ants
- Benoît Béchade
- , Christian S. Cabuslay
- & Jacob A. Russell
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Article |
Bacterial–fungal interactions promote parallel evolution of global transcriptional regulators in a widespread Staphylococcus species
- Casey M. Cosetta
- , Brittany Niccum
- & Benjamin E. Wolfe
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Article
| Open AccessStepwise pathway for early evolutionary assembly of dissimilatory sulfite and sulfate reduction
- Sinje Neukirchen
- , Inês A. C. Pereira
- & Filipa L. Sousa
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Article
| Open AccessPrey preference in a kleptoplastic dinoflagellate is linked to photosynthetic performance
- Norico Yamada
- , Bernard Lepetit
- & Rosa Trobajo
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Article
| Open AccessBacteria-phage coevolution with a seed bank
- Daniel A. Schwartz
- , William R. Shoemaker
- & Jay T. Lennon
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Article
| Open AccessHigh speciation rate of niche specialists in hot springs
- Qing He
- , Shang Wang
- & Ye Deng
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Article
| Open AccessPangenomics of the death cap mushroom Amanita phalloides, and of Agaricales, reveals dynamic evolution of toxin genes in an invasive range
- Milton T. Drott
- , Sung Chul Park
- & Anne Pringle
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Article
| Open AccessSulfur cycling connects microbiomes and biogeochemistry in deep-sea hydrothermal plumes
- Zhichao Zhou
- , Patricia Q. Tran
- & Karthik Anantharaman
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Article
| Open AccessCuticle supplementation and nitrogen recycling by a dual bacterial symbiosis in a family of xylophagous beetles
- Julian Simon Thilo Kiefer
- , Eugen Bauer
- & Tobias Engl
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Article
| Open AccessThermophilic Dehalococcoidia with unusual traits shed light on an unexpected past
- Marike Palmer
- , Jonathan K. Covington
- & Brian P. Hedlund
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Article
| Open AccessCo-diversification of an intestinal Mycoplasma and its salmonid host
- Jacob A. Rasmussen
- , Pia Kiilerich
- & Morten T. Limborg
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Article
| Open AccessRapid diversification underlying the global dominance of a cosmopolitan phytoplankton
- El Mahdi Bendif
- , Ian Probert
- & Dmitry Filatov
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Article
| Open AccessLocalized coevolution between microbial predator and prey alters community-wide gene expression and ecosystem function
- Shane L. Hogle
- , Liisa Ruusulehto
- & Teppo Hiltunen
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Article
| Open AccessEvolution of snow algae, from cosmopolitans to endemics, revealed by DNA analysis of ancient ice
- Takahiro Segawa
- , Takahiro Yonezawa
- & Nozomu Takeuchi
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Article |
CRISPR-Cas provides limited phage immunity to a prevalent gut bacterium in gnotobiotic mice
- Torben Sølbeck Rasmussen
- , Anna Kirstine Koefoed
- & Dennis Sandris Nielsen
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Article
| Open AccessCave Thiovulum (Candidatus Thiovulum stygium) differs metabolically and genomically from marine species
- Mina Bizic
- , Traian Brad
- & Serban M. Sarbu
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Article
| Open AccessIntracellular common gardens reveal niche differentiation in transposable element community during bacterial adaptive evolution
- Hui Guo
- , Wen-Tao Shi
- & Chang-Fu Tian
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Article
| Open AccessDistribution of fitness effects of cross-species transformation reveals potential for fast adaptive evolution
- Isabel Rathmann
- , Mona Förster
- & Berenike Maier
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Article |
Asgard ESCRT-III and VPS4 reveal conserved chromatin binding properties of the ESCRT machinery
- Dikla Nachmias
- , Nataly Melnikov
- & Natalie Elia
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Article
| Open AccessGenomic diversity and biosynthetic capabilities of sponge-associated chlamydiae
- Jennah E. Dharamshi
- , Natalia Gaarslev
- & Thijs J. G. Ettema
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Article |
Genomic insights into the phylogeny and biomass-degrading enzymes of rumen ciliates
- Zongjun Li
- , Xiangnan Wang
- & Yu Jiang
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Article
| Open AccessResistance evolution can disrupt antibiotic exposure protection through competitive exclusion of the protective species
- Angus M. Quinn
- , Michael J. Bottery
- & Ville-Petri Friman
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Article |
Mobile genetic elements used by competing coral microbial populations increase genomic plasticity
- Pengxia Wang
- , Yi Zhao
- & Xiaoxue Wang
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Article
| Open AccessConvergent evolution of a labile nutritional symbiosis in ants
- Raphaella Jackson
- , David Monnin
- & Lee M. Henry
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Brief Communication |
Revisiting biocrystallization: purine crystalline inclusions are widespread in eukaryotes
- Jana Pilátová
- , Tomáš Pánek
- & Peter Mojzeš
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Article
| Open AccessMetagenomic methylation patterns resolve bacterial genomes of unusual size and structural complexity
- Elizabeth G. Wilbanks
- , Hugo Doré
- & Jonathan A. Eisen
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Article |
Production of the plant hormone gibberellin by rhizobia increases host legume nodule size
- Ryan S. Nett
- , Kelly S. Bender
- & Reuben J. Peters
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Article |
Phylogenetic divergence and adaptation of Nitrososphaeria across lake depths and freshwater ecosystems
- Minglei Ren
- & Jianjun Wang
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Article
| Open AccessSpecies interactions constrain adaptation and preserve ecological stability in an experimental microbial community
- Jake N. Barber
- , Luke C. Nicholson
- & Michael J. McDonald
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Article
| Open AccessColonization of gut microbiota by plasmid-carrying bacteria is facilitated by evolutionary adaptation to antibiotic treatment
- Peng Zhang
- , Daqing Mao
- & Hongqiang Ren
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Article
| Open AccessMillimeter-scale vertical partitioning of nitrogen cycling in hypersaline mats reveals prominence of genes encoding multi-heme and prismane proteins
- P. Maza-Márquez
- , M. D. Lee
- & B. M. Bebout
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Article |
Molecular basis of a bacterial-amphibian symbiosis revealed by comparative genomics, modeling, and functional testing
- Andrés E. Brunetti
- , Boyke Bunk
- & Jörg Overmann
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Article
| Open AccessIncomplete tricarboxylic acid cycle and proton gradient in Pandoravirus massiliensis: is it still a virus?
- Sarah Aherfi
- , Djamal Brahim Belhaouari
- & Bernard La Scola
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Article
| Open AccessTransitional genomes and nutritional role reversals identified for dual symbionts of adelgids (Aphidoidea: Adelgidae)
- Dustin T. Dial
- , Kathryn M. Weglarz
- & Carol D. von Dohlen
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Article |
Maximum antigen diversification in a lyme bacterial population and evolutionary strategies to overcome pathogen diversity
- Lia Di
- , Saymon Akther
- & Wei-Gang Qiu
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Article
| Open AccessEnvironmental stress leads to genome streamlining in a widely distributed species of soil bacteria
- Anna K. Simonsen
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Article
| Open AccessThe coral symbiont Candidatus Aquarickettsia is variably abundant in threatened Caribbean acroporids and transmitted horizontally
- Lydia J. Baker
- , Hannah G. Reich
- & Rebecca Vega Thurber
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Article
| Open AccessEvolution of rhizobial symbiosis islands through insertion sequence-mediated deletion and duplication
- Haruka Arashida
- , Haruka Odake
- & Kiwamu Minamisawa
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Article
| Open AccessModeling host-associating microbes under selection
- Florence Bansept
- , Nancy Obeng
- & Arne Traulsen
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Article |
Evolution of the cytochrome bd oxygen reductase superfamily and the function of CydAA’ in Archaea
- Ranjani Murali
- , Robert B. Gennis
- & James Hemp
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Review Article |
Community context matters for bacteria-phage ecology and evolution
- Michael Blazanin
- & Paul E. Turner
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Article
| Open AccessDivergence of a genomic island leads to the evolution of melanization in a halophyte root fungus
- Zhilin Yuan
- , Irina S. Druzhinina
- & Francis M. Martin
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Article
| Open AccessCompositional and genetic alterations in Graves’ disease gut microbiome reveal specific diagnostic biomarkers
- Qiyun Zhu
- , Qiangchuan Hou
- & Jiachao Zhang
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Article |
Mutualistic microalgae co-diversify with reef corals that acquire symbionts during egg development
- Kira E. Turnham
- , Drew C. Wham
- & Todd C. LaJeunesse
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Article
| Open AccessGenomic evolution of the class Acidithiobacillia: deep-branching Proteobacteria living in extreme acidic conditions
- Ana Moya-Beltrán
- , Simón Beard
- & Raquel Quatrini
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