Table of contents
December 2006, Volume 8 No 12 pp1311-1454
About the coverEditorial
Sustainable databases - p1311
doi:10.1038/ncb1206-1311
Although the flood of cell biological knowledge rises relentlessly, many databases face an uncertain future. Unless funding for essential bioinformatic resources is set in stone, the next storm may wash away the foundation of future cell biology research.
Full Text - Sustainable databases | PDF (496 KB) - Sustainable databases
Book Review
Maintaining the Genome - p1312
Philip C Hanawalt reviews DNA Repair and Mutagenesis (Second Edition) by Errol Friedberg, Graham Walker, Wolfram Siede, Richard Wood, Roger Schultz & Tom Ellenberger
doi:10.1038/ncb1206-1312
Full Text - Maintaining the Genome | PDF (510 KB) - Maintaining the Genome
Commentary
DNA replication timing: random thoughts about origin firing - pp1313 - 1316
Nicholas Rhind
doi:10.1038/ncb1206-1313
Regions of metazoan genomes replicate at defined times within S phase. This observation suggests that replication origins fire with a defined timing pattern that remains the same from cycle to cycle. However, an alterative model based on the stochastic firing of origins may also explain replication timing. This model assumes varying origin efficiency instead of a strict origin-timing programme. Here, we discuss the evidence for both models.
Full Text - DNA replication timing: random thoughts about origin firing | PDF (875 KB) - DNA replication timing: random thoughts about origin firing
News and Views
Upgrading the BCL-2 Network - pp1317 - 1319
Heidi L. Galonek & J. Marie Hardwick
doi:10.1038/ncb1206-1317
The BCL-2 oncogene promotes cancer progression by prohibiting cell death. BCL-2-related regulators were once thought to constitute a simple, two-class system of anti-death and pro-death factors. New data delineate a multistep hierarchy of BCL-2-family protein interactions that are driven by signal-dependent pathways.
Full Text - Upgrading the BCL-2 Network | PDF (290 KB) - Upgrading the BCL-2 Network
eIF4A goes beyond translation - pp1319 - 1321
Markus Affolter & George Pyrowolakis
doi:10.1038/ncb1206-1319
A new study has revealed an unexpected role for eukaryotic translation initiation factor 4A (eIF4A) in suppressing Decapentaplegic (Dpp) signalling. On activation of Dpp signalling, eIF4A promotes degradation of the downstream signalling components Mad and Medea in a translation-independent manner.
Full Text - eIF4A goes beyond translation | PDF (236 KB) - eIF4A goes beyond translation
S100 chemokines mediate bookmarking of premetastatic niches - pp1321 - 1323
Shahin Rafii & David Lyden
doi:10.1038/ncb1206-1321
Primary tumours release soluble factors, including VEGF-A, TGF
and TNF
, which induce expression of the chemokines S100A8 and S100A9 in the myeloid and endothelial cells within the lung before tumour metastasis. These chemokine-activated premetastatic niches support adhesion and invasion of disseminating malignant cells, thereby establishing a fertile habitat for metastatic tumours.
Full Text - S100 chemokines mediate bookmarking of premetastatic niches | PDF (230 KB) - S100 chemokines mediate bookmarking of premetastatic niches
Voltage sparks a GPCR - pp1323 - 1325
Peter Stanfield
doi:10.1038/ncb1206-1323
The response of some G-protein coupled receptors (GPRCs) is affected by the voltage across the membrane in which they sit. A study now shows that gating currents, similar to those of ion channels, are associated with this alteration in GPRC activity. The currents depend on structural elements of the receptor that functionally couple to G proteins.
Full Text - Voltage sparks a GPCR | PDF (212 KB) - Voltage sparks a GPCR
Shaped to split - p1325
Sinéad Hayes
doi:10.1038/ncb1206-1325
Full Text - Shaped to split | PDF (154 KB) - Shaped to split
Articles
Maintenance of colonic homeostasis by distinctive apical TLR9 signalling in intestinal epithelial cells - pp1327 - 1336
Jongdae Lee, Ji-Hun Mo, Kyoko Katakura, Irit Alkalay, Adam N. Rucker, Yu-Tsueng Liu, Hyun-Ku Lee, Carol Shen, Gady Cojocaru, Steve Shenouda, Martin Kagnoff, Lars Eckmann, Yinon Ben-Neriah & Eyal Raz
doi:10.1038/ncb1500
Abstract - | Full Text - Maintenance of colonic homeostasis by distinctive apical TLR9 signalling in intestinal epithelial cells | PDF (1,957 KB) - Maintenance of colonic homeostasis by distinctive apical TLR9 signalling in intestinal epithelial cells | Supplementary information
Regulation of cell shape by Cdc42 is mediated by the synergic actin-bundling activity of the Eps8–IRSp53 complex - pp1337 - 1347
Andrea Disanza, Sara Mantoani, Maud Hertzog, Silke Gerboth, Emanuela Frittoli, Anika Steffen, Kerstin Berhoerster, Hans-Juergen Kreienkamp, Francesca Milanesi, Pier Paolo Di Fiore, Andrea Ciliberto, Theresia E. B. Stradal & Giorgio Scita
doi:10.1038/ncb1502
Abstract - | Full Text - Regulation of cell shape by Cdc42 is mediated by the synergic actin-bundling activity of the Eps8–IRSp53 complex | PDF (2,853 KB) - Regulation of cell shape by Cdc42 is mediated by the synergic actin-bundling activity of the Eps8–IRSp53 complex | Supplementary information
Hierarchical regulation of mitochondrion-dependent apoptosis by BCL-2 subfamilies - pp1348 - 1358
Hyungjin Kim, Mubina Rafiuddin-Shah, Ho-Chou Tu, John R. Jeffers, Gerard P. Zambetti, James J.-D. Hsieh & Emily H.-Y. Cheng
doi:10.1038/ncb1499
Abstract - | Full Text - Hierarchical regulation of mitochondrion-dependent apoptosis by BCL-2 subfamilies | PDF (1,552 KB) - Hierarchical regulation of mitochondrion-dependent apoptosis by BCL-2 subfamilies | Supplementary information
See also: News and Views by Galonek & Hardwick
Tyrosine phosphorylation controls PCNA function through protein stability - pp1359 - 1368
Shao-Chun Wang, Yusuke Nakajima, Yung-Luen Yu, Weiya Xia, Chun-Te Chen, Cheng-Chieh Yang, Eric W. McIntush, Long-Yuan Li, David H. Hawke, Ryuji Kobayashi & Mien-Chie Hung
doi:10.1038/ncb1501
Abstract - | Full Text - Tyrosine phosphorylation controls PCNA function through protein stability | PDF (1,560 KB) - Tyrosine phosphorylation controls PCNA function through protein stability | Supplementary information
Letters
Tumour-mediated upregulation of chemoattractants and recruitment of myeloid cells predetermines lung metastasis - pp1369 - 1375
Sachie Hiratsuka, Akira Watanabe, Hiroyuki Aburatani & Yoshiro Maru
doi:10.1038/ncb1507
First Paragraph - | Full Text - Tumour-mediated upregulation of chemoattractants and recruitment of myeloid cells predetermines lung metastasis | PDF (2,568 KB) - Tumour-mediated upregulation of chemoattractants and recruitment of myeloid cells predetermines lung metastasis | Supplementary information
See also: News and Views by Rafii & Lyden
Key components of the fission machinery are interchangeable - pp1376 - 1382
Jia-Shu Yang, Leiliang Zhang, Stella Y. Lee, Helge Gad, Alberto Luini & Victor W. Hsu
doi:10.1038/ncb1503
First Paragraph - | Full Text - Key components of the fission machinery are interchangeable | PDF (1,797 KB) - Key components of the fission machinery are interchangeable | Supplementary information
Exo70 interacts with the Arp2/3 complex and regulates cell migration - pp1383 - 1388
Xiaofeng Zuo, Jian Zhang, Ying Zhang, Shu-Chan Hsu, Daoguo Zhou & Wei Guo
doi:10.1038/ncb1505
First Paragraph - | Full Text - Exo70 interacts with the Arp2/3 complex and regulates cell migration | PDF (1,322 KB) - Exo70 interacts with the Arp2/3 complex and regulates cell migration | Supplementary information
Phospholipase C
1 negatively regulates growth hormone signalling by forming a ternary complex with Jak2 and protein tyrosine phosphatase-1B - pp1389 - 1397
Jang Hyun Choi, Hyeon Soo Kim, Sun-Hee Kim, Yong Ryoul Yang, Yun Soo Bae, Jong-Soo Chang, H. Moo Kwon, Sung Ho Ryu & Pann-Ghill Suh
doi:10.1038/ncb1509
First Paragraph - | Full Text - Phospholipase C
1 negatively regulates growth hormone signalling by forming a ternary complex with Jak2 and protein tyrosine phosphatase-1B | PDF (4,218 KB) - Phospholipase C
1 negatively regulates growth hormone signalling by forming a ternary complex with Jak2 and protein tyrosine phosphatase-1B | Supplementary information
A Wnt–Axin2–GSK3
cascade regulates Snail1 activity in breast cancer cells - pp1398 - 1406
Jong In Yook, Xiao-Yan Li, Ichiro Ota, Casey Hu, Hyun Sil Kim, Nam Hee Kim, So Young Cha, Joo Kyung Ryu, Yoon Jung Choi, Jin Kim, Eric R. Fearon & Stephen J. Weiss
doi:10.1038/ncb1508
First Paragraph - | Full Text - A Wnt–Axin2–GSK3
cascade regulates Snail1 activity in breast cancer cells | PDF (2,410 KB) - A Wnt–Axin2–GSK3
cascade regulates Snail1 activity in breast cancer cells | Supplementary information
A novel function of Drosophila eIF4A as a negative regulator of Dpp/BMP signalling that mediates SMAD degradation - pp1407 - 1414
Jinghong Li & Willis X. Li
doi:10.1038/ncb1506
First Paragraph - | Full Text - A novel function of Drosophila eIF4A as a negative regulator of Dpp/BMP signalling that mediates SMAD degradation | PDF (1,688 KB) - A novel function of Drosophila eIF4A as a negative regulator of Dpp/BMP signalling that mediates SMAD degradation | Supplementary information
See also: News and Views by Affolter & Pyrowolakis
Numb is a suppressor of Hedgehog signalling and targets Gli1 for Itch-dependent ubiquitination - pp1415 - 1423
Lucia Di Marcotullio, Elisabetta Ferretti, Azzura Greco, Enrico De Smaele, Agnese Po, Maria Anna Sico, Maurizio Alimandi, Giuseppe Giannini, Marella Maroder, Isabella Screpanti & Alberto Gulino
doi:10.1038/ncb1510
First Paragraph - | Full Text - Numb is a suppressor of Hedgehog signalling and targets Gli1 for Itch-dependent ubiquitination | PDF (1,739 KB) - Numb is a suppressor of Hedgehog signalling and targets Gli1 for Itch-dependent ubiquitination | Supplementary information
SUMO-specific protease SUSP4 positively regulates p53 by promoting Mdm2 self-ubiquitination - pp1424 - 1431
Moon Hee Lee, Sung Won Lee, Eun Joo Lee, Soo Joon Choi, Sung Soo Chung, Jae Il Lee, Joong Myung Cho, Jae Hong Seol, Sung Hee Baek, Keun Il Kim, Tomoki Chiba, Keiji Tanaka, Ok Sun Bang & Chin Ha Chung
doi:10.1038/ncb1512
First Paragraph - | Full Text - SUMO-specific protease SUSP4 positively regulates p53 by promoting Mdm2 self-ubiquitination | PDF (1,549 KB) - SUMO-specific protease SUSP4 positively regulates p53 by promoting Mdm2 self-ubiquitination | Supplementary information
The armadillo protein p0071 regulates Rho signalling during cytokinesis - pp1432 - 1440
Annika Wolf, Rene Keil, Oliver Götzl, Andrej Mun, Katrin Schwarze, Marcell Lederer, Stefan Hüttelmaier & Mechthild Hatzfeld
doi:10.1038/ncb1504
First Paragraph - | Full Text - The armadillo protein p0071 regulates Rho signalling during cytokinesis | PDF (2,199 KB) - The armadillo protein p0071 regulates Rho signalling during cytokinesis | Supplementary information
Cyclin E–Cdk2 temporally regulates centrosome assembly and establishment of polarity in Caenorhabditis elegans embryos - pp1441 - 1447
Carrie R. Cowan & Anthony A. Hyman
doi:10.1038/ncb1511
First Paragraph - | Full Text - Cyclin E–Cdk2 temporally regulates centrosome assembly and establishment of polarity in Caenorhabditis elegans embryos | PDF (1,694 KB) - Cyclin E–Cdk2 temporally regulates centrosome assembly and establishment of polarity in Caenorhabditis elegans embryos | Supplementary information
Lsh is required for meiotic chromosome synapsis and retrotransposon silencing in female germ cells - pp1448 - 1454
Rabindranath De La Fuente, Claudia Baumann, Tao Fan, Anja Schmidtmann, Ina Dobrinski & Kathrin Muegge
doi:10.1038/ncb1513
First Paragraph - | Full Text - Lsh is required for meiotic chromosome synapsis and retrotransposon silencing in female germ cells | PDF (1,958 KB) - Lsh is required for meiotic chromosome synapsis and retrotransposon silencing in female germ cells | Supplementary information


