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Original Article |
Inter-phylum HGT has shaped the metabolism of many mesophilic and anaerobic bacteria
- Alejandro Caro-Quintero
- & Konstantinos T Konstantinidis
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Original Article |
Adhesion as a weapon in microbial competition
- Jonas Schluter
- , Carey D Nadell
- & Kevin R Foster
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Original Article |
Comparative genomics reveals surprising divergence of two closely related strains of uncultivated UCYN-A cyanobacteria
- Deniz Bombar
- , Philip Heller
- & Jonathan P Zehr
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Original Article |
Depth-stratified functional and taxonomic niche specialization in the ‘core’ and ‘flexible’ Pacific Ocean Virome
- Bonnie L Hurwitz
- , Jennifer R Brum
- & Matthew B Sullivan
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Original Article
| Open AccessQuantifying separation and similarity in a Saccharomyces cerevisiae metapopulation
- Sarah Knight
- & Matthew R Goddard
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Original Article |
Primate vaginal microbiomes exhibit species specificity without universal Lactobacillus dominance
- Suleyman Yildirim
- , Carl J Yeoman
- & Rebecca M Stumpf
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Original Article |
Water fleas require microbiota for survival, growth and reproduction
- Marilou P Sison-Mangus
- , Alexandra A Mushegian
- & Dieter Ebert
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Original Article |
Interpreting 16S metagenomic data without clustering to achieve sub-OTU resolution
- Mikhail Tikhonov
- , Robert W Leach
- & Ned S Wingreen
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Original Article |
Widespread expression of conserved small RNAs in small symbiont genomes
- Allison K Hansen
- & Patrick H Degnan
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Original Article |
Comparative analysis of the interaction between habitat and growth form in diatoms
- Teofil Nakov
- , Matt Ashworth
- & Edward C Theriot
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Original Article |
Genomic insights into the uncultured genus ‘Candidatus Magnetobacterium’ in the phylum Nitrospirae
- Wei Lin
- , Aihua Deng
- & Yongxin Pan
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Original Article |
Phage and bacteria support mutual diversity in a narrowing staircase of coexistence
- Jan O Haerter
- , Namiko Mitarai
- & Kim Sneppen
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Winogradsky Review |
Implications of streamlining theory for microbial ecology
- Stephen J Giovannoni
- , J Cameron Thrash
- & Ben Temperton
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Original Article |
Dynamics of bacterial community succession in a salt marsh chronosequence: evidences for temporal niche partitioning
- Francisco Dini-Andreote
- , Michele de Cássia Pereira e Silva
- & Joana Falcão Salles
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Original Article |
Density of founder cells affects spatial pattern formation and cooperation in Bacillus subtilis biofilms
- Jordi van Gestel
- , Franz J Weissing
- & Ákos T Kovács
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Original Article |
Phylogenetic and functional gene structure shifts of the oral microbiomes in periodontitis patients
- Yan Li
- , Jinzhi He
- & Xuedong Zhou
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Original Article |
Phages can constrain protist predation-driven attenuation of Pseudomonas aeruginosa virulence in multienemy communities
- Ville-Petri Friman
- & Angus Buckling
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Original Article
| Open AccessPicocyanobacteria containing a novel pigment gene cluster dominate the brackish water Baltic Sea
- John Larsson
- , Narin Celepli
- & Martin Ekman
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Original Article |
Metabolic interdependencies between phylogenetically novel fermenters and respiratory organisms in an unconfined aquifer
- Kelly C Wrighton
- , Cindy J Castelle
- & Jillian F Banfield
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Commentary |
‘Geoarchaeote NAG1’ is a deeply rooting lineage of the archaeal order Thermoproteales rather than a new phylum
- Lionel Guy
- , Anja Spang
- & Thijs J G Ettema
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Original Article |
Single-cell enabled comparative genomics of a deep ocean SAR11 bathytype
- J Cameron Thrash
- , Ben Temperton
- & Stephan J Giovannoni
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Original Article
| Open AccessThe quest for a unified view of bacterial land colonization
- Hao Wu
- , Yongjun Fang
- & Zhang Zhang
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Original Article |
Evolutionary analysis of a streamlined lineage of surface ocean Roseobacters
- Haiwei Luo
- , Brandon K Swan
- & Mary Ann Moran
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Original Article |
Host-specificity among abundant and rare taxa in the sponge microbiome
- Julie Reveillaud
- , Loïs Maignien
- & Ann Vanreusel
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Original Article |
Swapping symbionts in spittlebugs: evolutionary replacement of a reduced genome symbiont
- Ryuichi Koga
- & Nancy A Moran
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Original Article |
Diversity and methane oxidation of active epibiotic methanotrophs on live Shinkaia crosnieri
- Tomo-o Watsuji
- , Asami Yamamoto
- & Ken Takai
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Short Communication |
Host immune responses accelerate pathogen evolution
- Pankaj Trivedi
- & Nian Wang
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Original Article |
Eco-evolutionary feedbacks drive species interactions
- Andrés Andrade-Domínguez
- , Emmanuel Salazar
- & Sergio Encarnación
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Short Communication |
Single-cell genomics shedding light on marine Thaumarchaeota diversification
- Haiwei Luo
- , Bradley B Tolar
- & James T Hollibaugh
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Original Article |
Niche specialization of novel Thaumarchaeota to oxic and hypoxic acidic geothermal springs of Yellowstone National Park
- Jacob P Beam
- , Zackary J Jay
- & William P Inskeep
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Original Article |
Exploring the uncultured microeukaryote majority in the oceans: reevaluation of ribogroups within stramenopiles
- Ramon Massana
- , Javier del Campo
- & Ramiro Logares
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Original Article
| Open AccessPositive epistasis between co-infecting plasmids promotes plasmid survival in bacterial populations
- Alvaro San Millan
- , Karl Heilbron
- & R Craig MacLean
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Original Article |
Sympatric inhibition and niche differentiation suggest alternative coevolutionary trajectories among Streptomycetes
- Linda L Kinkel
- , Daniel C Schlatter
- & Anita D Baines
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Original Article |
Genetic diversity of inorganic carbon uptake systems causes variation in CO2 response of the cyanobacterium Microcystis
- Giovanni Sandrini
- , Hans C P Matthijs
- & Jef Huisman
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Original Article
| Open AccessGenetic and functional properties of uncultivated MCG archaea assessed by metagenome and gene expression analyses
- Jun Meng
- , Jun Xu
- & Fengping Wang
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Original Article |
Dispersal network structure and infection mechanism shape diversity in a coevolutionary bacteria-phage system
- Michael Sieber
- , Matthew Robb
- & Ivana Gudelj
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Original Article |
The (d)evolution of methanotrophy in the Beijerinckiaceae—a comparative genomics analysis
- Ivica Tamas
- , Angela V Smirnova
- & Peter F Dunfield
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Original Article |
Repeated triggering of sporulation in Bacillus subtilis selects against a protein that affects the timing of cell division
- Jeroen Siebring
- , Matthijs JH Elema
- & Oscar P Kuipers
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Short Communication |
Coevolution with phages does not influence the evolution of bacterial mutation rates in soil
- Pedro Gómez
- & Angus Buckling
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Original Article |
Comparative genomics of pathogenic lineages of Vibrio nigripulchritudo identifies virulence-associated traits
- David Goudenège
- , Yannick Labreuche
- & Frédérique Le Roux
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Original Article
| Open AccessGene invasion in distant eukaryotic lineages: discovery of mutually exclusive genetic elements reveals marine biodiversity
- Adam Monier
- , Sebastian Sudek
- & Alexandra Z Worden
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Original Article |
Characterization of NaCl tolerance in Desulfovibrio vulgaris Hildenborough through experimental evolution
- Aifen Zhou
- , Edward Baidoo
- & Jizhong Zhou
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Original Article |
Combined effect of loss of the caa3 oxidase and Crp regulation drives Shewanella to thrive in redox-stratified environments
- Guangqi Zhou
- , Jianhua Yin
- & Haichun Gao
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Original Article |
High-resolution SAR11 ecotype dynamics at the Bermuda Atlantic Time-series Study site by phylogenetic placement of pyrosequences
- Kevin L Vergin
- , Bánk Beszteri
- & Stephen J Giovannoni
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Original Article |
Phylogenetic beta diversity in bacterial assemblages across ecosystems: deterministic versus stochastic processes
- Jianjun Wang
- , Ji Shen
- & Enlou Zhang
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Original Article |
Diversification of endosymbiosis: replacements, co-speciation and promiscuity of bacteriocyte symbionts in weevils
- Hirokazu Toju
- , Akifumi S Tanabe
- & Takema Fukatsu
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Original Article |
The species-rich assemblages of tintinnids (marine planktonic protists) are structured by mouth size
- John R Dolan
- , Michael R Landry
- & Mark E Ritchie
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Original Article |
Experimental evolution of nodule intracellular infection in legume symbionts
- Su Hua Guan
- , Carine Gris
- & Delphine Capela
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Commentary |
Waiting for the human intestinal Eukaryotome
- Lee O'Brien Andersen
- , Henrik Vedel Nielsen
- & Christen Rune Stensvold
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