Featured
-
-
Article
| Open Access
Regulatory fine-tuning of mcr-1 increases bacterial fitness and stabilises antibiotic resistance in agricultural settings
- Lois Ogunlana
- , Divjot Kaur
- & R. C. MacLean
-
Article
| Open Access
Pangenomics of the death cap mushroom Amanita phalloides, and of Agaricales, reveals dynamic evolution of toxin genes in an invasive range
- Milton T. Drott
- , Sung Chul Park
- & Anne Pringle
-
Article
| Open Access
Sulfur cycling connects microbiomes and biogeochemistry in deep-sea hydrothermal plumes
- Zhichao Zhou
- , Patricia Q. Tran
- & Karthik Anantharaman
-
Article
| Open Access
Co-diversification of an intestinal Mycoplasma and its salmonid host
- Jacob A. Rasmussen
- , Pia Kiilerich
- & Morten T. Limborg
-
Article
| Open Access
Rapid diversification underlying the global dominance of a cosmopolitan phytoplankton
- El Mahdi Bendif
- , Ian Probert
- & Dmitry Filatov
-
Article
| Open Access
Millimeter-scale vertical partitioning of nitrogen cycling in hypersaline mats reveals prominence of genes encoding multi-heme and prismane proteins
- P. Maza-Márquez
- , M. D. Lee
- & B. M. Bebout
-
Article
| Open Access
Whole genome sequences reveal the Xanthomonas perforans population is shaped by the tomato production system
- Jeannie M. Klein-Gordon
- , Sujan Timilsina
- & Erica M. Goss
-
Article |
Maximum antigen diversification in a lyme bacterial population and evolutionary strategies to overcome pathogen diversity
- Lia Di
- , Saymon Akther
- & Wei-Gang Qiu
-
Article
| Open Access
Environmental stress leads to genome streamlining in a widely distributed species of soil bacteria
- Anna K. Simonsen
-
Article
| Open Access
The coral symbiont Candidatus Aquarickettsia is variably abundant in threatened Caribbean acroporids and transmitted horizontally
- Lydia J. Baker
- , Hannah G. Reich
- & Rebecca Vega Thurber
-
Article
| Open Access
Divergence of a genomic island leads to the evolution of melanization in a halophyte root fungus
- Zhilin Yuan
- , Irina S. Druzhinina
- & Francis M. Martin
-
Article
| Open Access
Compositional and genetic alterations in Graves’ disease gut microbiome reveal specific diagnostic biomarkers
- Qiyun Zhu
- , Qiangchuan Hou
- & Jiachao Zhang
-
Article
| Open Access
Deep-sea mussels from a hybrid zone on the Mid-Atlantic Ridge host genetically indistinguishable symbionts
- Merle Ücker
- , Rebecca Ansorge
- & Nicole Dubilier
-
Article
| Open Access
Ecologically coherent population structure of uncultivated bacterioplankton
- Conny Sjöqvist
- , Luis Fernando Delgado
- & Anders F. Andersson
-
Article
| Open Access
Mutability of demographic noise in microbial range expansions
- QinQin Yu
- , Matti Gralka
- & Oskar Hallatschek
-
Article
| Open Access
Synergistic epistasis enhances the co-operativity of mutualistic interspecies interactions
- Serdar Turkarslan
- , Nejc Stopnisek
- & Nitin S. Baliga
-
Article
| Open Access
Resolving cryptic species complexes in marine protists: phylogenetic haplotype networks meet global DNA metabarcoding datasets
- Daniele De Luca
- , Roberta Piredda
- & Wiebe H.C.F. Kooistra
-
Brief Communication |
Unexpectedly high mutation rate of a deep-sea hyperthermophilic anaerobic archaeon
- Jiahao Gu
- , Xiaojun Wang
- & Haiwei Luo
-
Article
| Open Access
Mapping the adaptive landscape of a major agricultural pathogen reveals evolutionary constraints across heterogeneous environments
- Anik Dutta
- , Fanny E. Hartmann
- & Daniel Croll
-
Article
| Open Access
Negative frequency-dependent selection and asymmetrical transformation stabilise multi-strain bacterial population structures
- Gabrielle L. Harrow
- , John A. Lees
- & Nicholas J. Croucher
-
Article |
Rapid evolution destabilizes species interactions in a fluctuating environment
- Alejandra Rodríguez-Verdugo
- & Martin Ackermann
-
Article |
Experimental evolution reveals nitrate tolerance mechanisms in Desulfovibrio vulgaris
- Bo Wu
- , Feifei Liu
- & Zhili He
-
Article
| Open Access
A 500-year tale of co-evolution, adaptation, and virulence: Helicobacter pylori in the Americas
- Zilia Y. Muñoz-Ramirez
- , Ben Pascoe
- & Javier Torres
-
Article |
Cryptic speciation of a pelagic Roseobacter population varying at a few thousand nucleotide sites
- Xiaojun Wang
- , Yao Zhang
- & Haiwei Luo
-
Article |
Allelic polymorphism shapes community function in evolving Pseudomonas aeruginosa populations
- Sheyda Azimi
- , Aled E. L. Roberts
- & Stephen P. Diggle
-
Article
| Open Access
Soil bacterial populations are shaped by recombination and gene-specific selection across a grassland meadow
- Alexander Crits-Christoph
- , Matthew R. Olm
- & Jillian F. Banfield
-
Article
| Open Access
The CRISPR-Cas systems were selectively inactivated during evolution of Bacillus cereus group for adaptation to diverse environments
- Ziqiang Zheng
- , Yulan Zhang
- & Donghai Peng
-
Article
| Open Access
The Green Revolution shaped the population structure of the rice pathogen Xanthomonas oryzae pv. oryzae
- Ian Lorenzo Quibod
- , Genelou Atieza-Grande
- & Ricardo Oliva
-
Article
| Open Access
Horizontally transmitted symbiont populations in deep-sea mussels are genetically isolated
- Devani Romero Picazo
- , Tal Dagan
- & Anne Kupczok
-
-
Article
| Open Access
Rethinking gut microbiome residency and the Enterobacteriaceae in healthy human adults
- Jonathan N. V. Martinson
- , Nicholas V. Pinkham
- & Seth T. Walk
-
Article
| Open Access
Clonality and non-linearity drive facultative-cooperation allele diversity
- Ishay Ben-Zion
- , Shaul Pollak
- & Avigdor Eldar
-
Article
| Open Access
Dynamic genomic architecture of mutualistic cooperation in a wild population of Mesorhizobium
- Stephanie S. Porter
- , Joshua Faber-Hammond
- & Cynthia Sackos
-
Article |
The anchoring effect—long-term dormancy and genetic population structure
- Lisa Sundqvist
- , Anna Godhe
- & Josefin Sefbom
-
Article |
Culture- and metagenomics-enabled analyses of the Methanosphaera genus reveals their monophyletic origin and differentiation according to genome size
- Emily C. Hoedt
- , Donovan H. Parks
- & Mark Morrison
-
Article
| Open Access
Genetic variability and ontogeny predict microbiome structure in a disease-challenged montane amphibian
- Sarah M. Griffiths
- , Xavier A. Harrison
- & Rachael E. Antwis
-
Article |
Macroevolution of gastric Helicobacter species unveils interspecies admixture and time of divergence
- Annemieke Smet
- , Koji Yahara
- & Jukka Corander
-
Article
| Open Access
Selection for increased quorum-sensing cooperation in Pseudomonas aeruginosa through the shut-down of a drug resistance pump
- Ron D. Oshri
- , Keren S. Zrihen
- & Avigdor Eldar
-
Article |
Phylogenetic conservatism of thermal traits explains dispersal limitation and genomic differentiation of Streptomyces sister-taxa
- Mallory J. Choudoir
- & Daniel H. Buckley
-
Article
| Open Access
Population genomic analysis of the rice blast fungus reveals specific events associated with expansion of three main clades
- Zhenhui Zhong
- , Meilian Chen
- & Zonghua Wang
-
Article |
Comparative genomics sheds light on niche differentiation and the evolutionary history of comammox Nitrospira
- Alejandro Palomo
- , Anders G. Pedersen
- & Barth F. Smets
-
Original Article |
Clonal expansion behind a marine diatom bloom
- Maria Valeria Ruggiero
- , Domenico D'Alelio
- & Marina Montresor
-
Original Article |
Evidence for a primate origin of zoonotic Helicobacter suis colonizing domesticated pigs
- Bram Flahou
- , Mirko Rossi
- & Freddy Haesebrouck
-
Original Article
| Open Access
Large-scale comparative metagenomics of Blastocystis, a common member of the human gut microbiome
- Francesco Beghini
- , Edoardo Pasolli
- & Nicola Segata
-
Short Communication
| Open Access
Prokaryote genome fluidity is dependent on effective population size
- Nadia Andrea Andreani
- , Elze Hesse
- & Michiel Vos
-
Original Article
| Open Access
Chirality in microbial biofilms is mediated by close interactions between the cell surface and the substratum
- Liselotte Jauffred
- , Rebecca Munk Vejborg
- & Lene B Oddershede
-
Original Article |
Mixed transmission modes and dynamic genome evolution in an obligate animal–bacterial symbiosis
- Shelbi L Russell
- , Russell B Corbett-Detig
- & Colleen M Cavanaugh
-
Original Article |
A fungal wheat pathogen evolved host specialization by extensive chromosomal rearrangements
- Fanny E Hartmann
- , Andrea Sánchez-Vallet
- & Daniel Croll
-
Original Article |
Endemicity of the cosmopolitan mesophilic chemolithoautotroph Sulfurimonas at deep-sea hydrothermal vents
- Sayaka Mino
- , Satoshi Nakagawa
- & Tomoo Sawabe
Mutualism reduces the severity of gene disruptions in predictable ways across microbial communities
Recent mixing of Vibrio parahaemolyticus populations