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Biofilm matrix cloaks bacterial quorum sensing chemoattractants from predator detection
- Shaoyang Li
- , Sylvia Yang Liu
- & Song Lin Chua
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Article
| Open AccessNewly identified HMO-2011-type phages reveal genomic diversity and biogeographic distributions of this marine viral group
- Fang Qin
- , Sen Du
- & Yanlin Zhao
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Plant neighborhood shapes diversity and reduces interspecific variation of the phyllosphere microbiome
- Kyle M. Meyer
- , Robert Porch
- & Britt Koskella
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Article
| Open AccessForest tree growth is linked to mycorrhizal fungal composition and function across Europe
- Mark A. Anthony
- , Thomas W. Crowther
- & Colin Averill
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Article
| Open AccessSoils and sediments host Thermoplasmata archaea encoding novel copper membrane monooxygenases (CuMMOs)
- Spencer Diamond
- , Adi Lavy
- & Jillian F. Banfield
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Article
| Open AccessDissecting the dominant hot spring microbial populations based on community-wide sampling at single-cell genomic resolution
- Robert M. Bowers
- , Stephen Nayfach
- & Tanja Woyke
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Article
| Open AccessSoil minerals affect taxon-specific bacterial growth
- Brianna K. Finley
- , Rebecca L. Mau
- & Bruce A. Hungate
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Article
| Open AccessDiel investments in metabolite production and consumption in a model microbial system
- Mario Uchimiya
- , William Schroer
- & Mary Ann Moran
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Genomic landscape of a relict fir-associated fungus reveals rapid convergent adaptation towards endophytism
- Zhilin Yuan
- , Qi Wu
- & Francis M. Martin
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Article
| Open AccessPhage co-transport with hyphal-riding bacteria fuels bacterial invasion in a water-unsaturated microbial model system
- Xin You
- , René Kallies
- & Lukas Y. Wick
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Article
| Open AccessMammalian gut metabolomes mirror microbiome composition and host phylogeny
- Rachel Gregor
- , Maraike Probst
- & Itzhak Mizrahi
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Article
| Open AccessCarbon assimilating fungi from surface ocean to subseafloor revealed by coupled phylogenetic and stable isotope analysis
- William D. Orsi
- , Aurèle Vuillemin
- & Gonzalo V. Gomez-Saez
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Article
| Open AccessCommensal Pseudomonas protect Arabidopsis thaliana from a coexisting pathogen via multiple lineage-dependent mechanisms
- Or Shalev
- , Haim Ashkenazy
- & Detlef Weigel
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Toward quantifying the adaptive role of bacterial pangenomes during environmental perturbations
- Roth E. Conrad
- , Tomeu Viver
- & Konstantinos T. Konstantinidis
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Article
| Open AccessProtozoa populations are ecosystem engineers that shape prokaryotic community structure and function of the rumen microbial ecosystem
- Ronnie Solomon
- , Tanita Wein
- & Elie Jami
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Article
| Open AccessBolstering fitness via CO2 fixation and organic carbon uptake: mixotrophs in modern groundwater
- Martin Taubert
- , Will A. Overholt
- & Kirsten Küsel
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Diverse ecophysiological adaptations of subsurface Thaumarchaeota in floodplain sediments revealed through genome-resolved metagenomics
- Linta Reji
- , Emily L. Cardarelli
- & Christopher A. Francis
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Eco-evolutionary responses of the microbial loop to surface ocean warming and consequences for primary production
- Philippe Cherabier
- & Régis Ferrière
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Article
| Open AccessMillimeter-scale vertical partitioning of nitrogen cycling in hypersaline mats reveals prominence of genes encoding multi-heme and prismane proteins
- P. Maza-Márquez
- , M. D. Lee
- & B. M. Bebout
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Article
| Open AccessHeat stress reduces the contribution of diazotrophs to coral holobiont nitrogen cycling
- Nils Rädecker
- , Claudia Pogoreutz
- & Christian R. Voolstra
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Article
| Open AccessIn vitro interaction network of a synthetic gut bacterial community
- Anna S. Weiss
- , Anna G. Burrichter
- & Bärbel Stecher
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Article
| Open AccessPredation increases multiple components of microbial diversity in activated sludge communities
- Alfred Burian
- , Daisy Pinn
- & Pavel Kratina
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Article
| Open AccessNovel metabolic interactions and environmental conditions mediate the boreal peatmoss-cyanobacteria mutualism
- Alyssa A. Carrell
- , Dušan Veličković
- & David J. Weston
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Translation stalling proline motifs are enriched in slow-growing, thermophilic, and multicellular bacteria
- Tess E. Brewer
- & Andreas Wagner
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Article
| Open AccessTranscriptional responses of Trichodesmium to natural inverse gradients of Fe and P availability
- E. Cerdan-Garcia
- , A. Baylay
- & J. C. Robidart
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Article
| Open AccessPhotoheterotrophy by aerobic anoxygenic bacteria modulates carbon fluxes in a freshwater lake
- Kasia Piwosz
- , Cristian Villena-Alemany
- & Izabela Mujakić
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Article
| Open AccessBacterial response to spatial gradients of algal-derived nutrients in a porous microplate
- Hyungseok Kim
- , Jeffrey A. Kimbrel
- & Cullen R. Buie
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Unexpected myriad of co-occurring viral strains and species in one of the most abundant and microdiverse viruses on Earth
- Francisco Martinez-Hernandez
- , Awa Diop
- & Manuel Martinez-Garcia
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Spatial regulation of cell motility and its fitness effect in a surface-attached bacterial community
- Emrah Şimşek
- , Emma Dawson
- & Minsu Kim
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Article
| Open AccessViral community analysis in a marine oxygen minimum zone indicates increased potential for viral manipulation of microbial physiological state
- Sophie K. Jurgensen
- , Simon Roux
- & Jennifer R. Brum
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Article
| Open AccessTerrestrial connectivity, upstream aquatic history and seasonality shape bacterial community assembly within a large boreal aquatic network
- Masumi Stadler
- & Paul A. del Giorgio
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Heterotrophic bacterial diazotrophs are more abundant than their cyanobacterial counterparts in metagenomes covering most of the sunlit ocean
- Tom O. Delmont
- , Juan José Pierella Karlusich
- & Eric Pelletier
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Association of bacterial community types, functional microbial processes and lung disease in cystic fibrosis airways
- Stefanie Widder
- , Jiangchao Zhao
- & John J. LiPuma
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Article
| Open AccessIndirect reduction of Ralstonia solanacearum via pathogen helper inhibition
- Mei Li
- , Thomas Pommier
- & George A. Kowalchuk
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Article
| Open AccessKleptoplast distribution, photosynthetic efficiency and sequestration mechanisms in intertidal benthic foraminifera
- Bruno Jesus
- , Thierry Jauffrais
- & Emmanuelle Geslin
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Article
| Open AccessInter-species interactions alter antibiotic efficacy in bacterial communities
- Michael J. Bottery
- , Jessica L. Matthews
- & Ville-Petri Friman
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Coordination of root auxin with the fungus Piriformospora indica and bacterium Bacillus cereus enhances rice rhizosheath formation under soil drying
- Feiyun Xu
- , Hanpeng Liao
- & Weifeng Xu
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Molecular basis of a bacterial-amphibian symbiosis revealed by comparative genomics, modeling, and functional testing
- Andrés E. Brunetti
- , Boyke Bunk
- & Jörg Overmann
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Comment |
To methanotrophy and beyond! New insight into functional and ecological roles for copper chelators
- Ludmila Chistoserdova
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Review Article |
Microbial storage and its implications for soil ecology
- Kyle Mason-Jones
- , Serina L. Robinson
- & Wim H. van der Putten
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Article |
Bacillus velezensis stimulates resident rhizosphere Pseudomonas stutzeri for plant health through metabolic interactions
- Xinli Sun
- , Zhihui Xu
- & Ákos T. Kovács
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Macroecological distributions of gene variants highlight the functional organization of soil microbial systems
- Arthur Escalas
- , Fabiana S. Paula
- & Jizhong Zhou
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Article
| Open AccessFecal filtrate transplantation protects against necrotizing enterocolitis
- Anders Brunse
- , Ling Deng
- & Thomas Thymann
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Organic nitrogen utilisation by an arbuscular mycorrhizal fungus is mediated by specific soil bacteria and a protist
- Martin Rozmoš
- , Petra Bukovská
- & Jan Jansa
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Article
| Open AccessMicrodiversity characterizes prevalent phylogenetic clades in the glacier-fed stream microbiome
- Stilianos Fodelianakis
- , Alex D. Washburne
- & Tom J. Battin
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Review Article
| Open AccessPlant-microbe interactions in the phyllosphere: facing challenges of the anthropocene
- Rosaëlle Perreault
- & Isabelle Laforest-Lapointe
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Article |
Non-diphtheriae Corynebacterium species are associated with decreased risk of pneumococcal colonization during infancy
- Matthew S. Kelly
- , Catherine Plunkett
- & Patrick C. Seed
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Article
| Open AccessTransitional genomes and nutritional role reversals identified for dual symbionts of adelgids (Aphidoidea: Adelgidae)
- Dustin T. Dial
- , Kathryn M. Weglarz
- & Carol D. von Dohlen
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Article
| Open AccessVerrucomicrobiota are specialist consumers of sulfated methyl pentoses during diatom blooms
- Luis H. Orellana
- , T. Ben Francis
- & Rudolf I. Amann
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