Featured
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Perspective
| Open AccessRethinking CSR theory to incorporate microbial metabolic diversity and foraging traits
- J. L. Wood
- , A. A. Malik
- & A. E. Franks
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Article
| Open AccessShifts from cooperative to individual-based predation defense determine microbial predator-prey dynamics
- Magali de la Cruz Barron
- , Ellen van Velzen
- & David Kneis
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Article
| Open AccessMultilayer networks of plasmid genetic similarity reveal potential pathways of gene transmission
- Julie Teresa Shapiro
- , Alvah Zorea
- & Shai Pilosof
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Brief Communication
| Open AccessPulsed, continuous or somewhere in between? Resource dynamics matter in the optimisation of microbial communities
- Andrew D. Letten
- & William B. Ludington
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Article
| Open AccessFounder cell configuration drives competitive outcome within colony biofilms
- Lukas Eigentler
- , Margarita Kalamara
- & Fordyce A. Davidson
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Article
| Open AccessMicrodiversity characterizes prevalent phylogenetic clades in the glacier-fed stream microbiome
- Stilianos Fodelianakis
- , Alex D. Washburne
- & Tom J. Battin
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Article
| Open AccessModeling host-associating microbes under selection
- Florence Bansept
- , Nancy Obeng
- & Arne Traulsen
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Article
| Open AccessModeling the ecology of parasitic plasmids
- Jaime G. Lopez
- , Mohamed S. Donia
- & Ned S. Wingreen
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Article |
Improved model simulation of soil carbon cycling by representing the microbially derived organic carbon pool
- Xianlei Fan
- , Decai Gao
- & Edith Bai
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Article |
Dissimilarity–Overlap analysis of replicate enrichment communities
- Jean C. C. Vila
- , Yang-Yu Liu
- & Alvaro Sanchez
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Article |
Hitchhiking, collapse, and contingency in phage infections of migrating bacterial populations
- Derek Ping
- , Tong Wang
- & Seppe Kuehn
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Article
| Open AccessThe shape of a defense-growth trade-off governs seasonal trait dynamics in natural phytoplankton
- Elias Ehrlich
- , Nadja J. Kath
- & Ursula Gaedke
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Article
| Open AccessThe planktonic protist interactome: where do we stand after a century of research?
- Marit F. Markussen Bjorbækmo
- , Andreas Evenstad
- & Ramiro Logares
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Article |
Temporal phosphate gradients reveal diverse acclimation responses in phytoplankton phosphate uptake
- Carlos Cáceres
- , Sofie Spatharis
- & Juan A. Bonachela
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Perspective |
Use and abuse of correlation analyses in microbial ecology
- Alex Carr
- , Christian Diener
- & Sean M. Gibbons
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Article |
Size differences predict niche and relative fitness differences between phytoplankton species but not their coexistence
- Irene Gallego
- , Patrick Venail
- & Bas W. Ibelings
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Article |
‘NetShift’: a methodology for understanding ‘driver microbes’ from healthy and disease microbiome datasets
- Bhusan K. Kuntal
- , Pranjal Chandrakar
- & Sharmila S. Mande
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Article |
Consistent microbial dynamics and functional community patterns derived from first principles
- Hadrien Delattre
- , Elie Desmond-Le Quéméner
- & Théodore Bouchez
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Article |
The cost of toxin production in phytoplankton: the case of PST producing dinoflagellates
- Subhendu Chakraborty
- , Marina Pančić
- & Thomas Kiørboe
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Article |
The impact of failure: unsuccessful bacterial invasions steer the soil microbial community away from the invader’s niche
- C. A. Mallon
- , X. Le Roux
- & J. F. Salles
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Article |
When increasing population density can promote the evolution of metabolic cooperation
- Richard J. Lindsay
- , Bogna J. Pawlowska
- & Ivana Gudelj
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Original Article
| Open AccessPhage mobility is a core determinant of phage–bacteria coexistence in biofilms
- Emilia L Simmons
- , Knut Drescher
- & Vanni Bucci
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Original Article |
Modeling time-series data from microbial communities
- Benjamin J Ridenhour
- , Sarah L Brooker
- & Christopher H Remien
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Original Article
| Open AccessCohesion: a method for quantifying the connectivity of microbial communities
- Cristina M Herren
- & Katherine D McMahon
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Original Article |
The evolution of bacterial cell size: the internal diffusion-constraint hypothesis
- Romain Gallet
- , Cyrille Violle
- & Thomas Lenormand
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Original Article
| Open AccessA family of interaction-adjusted indices of community similarity
- Thomas Sebastian Benedikt Schmidt
- , João Frederico Matias Rodrigues
- & Christian von Mering
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Original Article
| Open AccessA quantitative analysis of the direct and indirect costs of nitrogen fixation: a model based on Azotobacter vinelandii
- Keisuke Inomura
- , Jason Bragg
- & Michael J Follows
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Original Article
| Open AccessMaking pathogens sociable: The emergence of high relatedness through limited host invasibility
- Edwin van Leeuwen
- , Sarah O'Neill
- & Ben Raymond
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Commentary
| Open AccessTritagonist as a new term for uncharacterised microorganisms in environmental systems
- Florian M Freimoser
- , Cosima Pelludat
- & Mitja N P Remus-Emsermann
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Original Article |
A multitrophic model to quantify the effects of marine viruses on microbial food webs and ecosystem processes
- Joshua S Weitz
- , Charles A Stock
- & K Eric Wommack
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Original Article |
Microbial dormancy improves development and experimental validation of ecosystem model
- Gangsheng Wang
- , Sindhu Jagadamma
- & Wilfred M Post
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Perspective
| Open AccessEcological theory as a foundation to control pathogenic invasion in aquaculture
- Peter De Schryver
- & Olav Vadstein
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Original Article |
Stochastic and deterministic assembly processes in subsurface microbial communities
- James C Stegen
- , Xueju Lin
- & James K Fredrickson