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Volume 4 No 7
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Nature protocols
Computational reconstruction of cell and tissue surfaces for modeling and data analysis - pp1006 - 1012
Frederick Klauschen, Hai Qi, Jackson G Egen, Ronald N Germain & Martin Meier-Schellersheim
Published online: 11 June 2009 | doi:10.1038/nprot.2009.94
Abstract - Computational reconstruction of cell and tissue surfaces for modeling and data analysis | Full Text - Computational reconstruction of cell and tissue surfaces for modeling and data analysis | PDF (680 KB) - Computational reconstruction of cell and tissue surfaces for modeling and data analysis | Supplementary information
Subject Categories: Cell and developmental biology | Computational and theoretical biology | Imaging
Determination of viral production in aquatic sediments using the dilution-based approach - pp1013 - 1022
Antonio Dell'Anno, Cinzia Corinaldesi, Mirko Magagnini & Roberto Danovaro
Published online: 11 June 2009 | doi:10.1038/nprot.2009.82
Abstract - Determination of viral production in aquatic sediments using the dilution-based approach | Full Text - Determination of viral production in aquatic sediments using the dilution-based approach | PDF (295 KB) - Determination of viral production in aquatic sediments using the dilution-based approach
Subject Categories: Isolation, purification and separation | Microbiology and virology
Coupling surface plasmon resonance to mass spectrometry to discover novel protein–protein interactions - pp1023 - 1037
Alexandra Madeira, Elisabet Öhman, Anna Nilsson, Benita Sjögren, Per E Andrén & Per Svenningsson
Published online: 11 June 2009 | doi:10.1038/nprot.2009.84
Abstract - Coupling surface plasmon resonance to mass spectrometry to discover novel protein-protein interactions | Full Text - Coupling surface plasmon resonance to mass spectrometry to discover novel protein–protein interactions | PDF (529 KB) - Coupling surface plasmon resonance to mass spectrometry to discover novel protein–protein interactions | Supplementary information
Subject Categories: Isolation, purification and separation | Microbiology and virology
Micropicking of nannofossils in preparation for analysis by secondary ion mass spectrometry - pp1038 - 1043
Heather M Stoll & Nobumichi Shimizu
Published online: 18 June 2009 | doi:10.1038/nprot.2009.83
Abstract - Micropicking of nannofossils in preparation for analysis by secondary ion mass spectrometry | Full Text - Micropicking of nannofossils in preparation for analysis by secondary ion mass spectrometry | PDF (314 KB) - Micropicking of nannofossils in preparation for analysis by secondary ion mass spectrometry
Subject Categories: Isolation, purification and separation | Spectroscopy and structural analysis
Photocrosslinking of glycoconjugates using metabolically incorporated diazirine-containing sugars - pp1044 - 1063
Michelle R Bond, Haochi Zhang, Peter D Vu & Jennifer J Kohler
Published online: 18 June 2009 | doi:10.1038/nprot.2009.85
Abstract - Photocrosslinking of glycoconjugates using metabolically incorporated diazirine-containing sugars | Full Text - Photocrosslinking of glycoconjugates using metabolically incorporated diazirine-containing sugars | PDF (703 KB) - Photocrosslinking of glycoconjugates using metabolically incorporated diazirine-containing sugars
Subject Categories: Biochemistry and protein analysis | Cell and developmental biology | Chemical modification | Spectroscopy and structural analysis | Synthetic chemistry
Conditional mouse lung cancer models using adenoviral or lentiviral delivery of Cre recombinase - pp1064 - 1072
Michel DuPage, Alison L Dooley & Tyler Jacks
Published online: 25 June 2009 | doi:10.1038/nprot.2009.95
Abstract - Conditional mouse lung cancer models using adenoviral or lentiviral delivery of Cre recombinase | Full Text - Conditional mouse lung cancer models using adenoviral or lentiviral delivery of Cre recombinase | PDF (649 KB) - Conditional mouse lung cancer models using adenoviral or lentiviral delivery of Cre recombinase | Supplementary information
Subject Category: Model organisms
Predicting the effects of coding non-synonymous variants on protein function using the SIFT algorithm - pp1073 - 1081
Prateek Kumar, Steven Henikoff & Pauline C Ng
Published online: 25 June 2009 | doi:10.1038/nprot.2009.86
Abstract - Predicting the effects of coding non-synonymous variants on protein function using the SIFT algorithm | Full Text - Predicting the effects of coding non-synonymous variants on protein function using the SIFT algorithm | PDF (1,027 KB) - Predicting the effects of coding non-synonymous variants on protein function using the SIFT algorithm
Subject Categories: Bioinformatics | In silico modeling
Purification of recombinant high molecular weight two-partner secretion proteins from Escherichia coli - pp1083 - 1092
James M Fleckenstein & Koushik Roy
Published online: 02 July 2009 | doi:10.1038/nprot.2009.87
Abstract - Purification of recombinant high molecular weight two-partner secretion proteins from : Escherichia coli | Full Text - Purification of recombinant high molecular weight two-partner secretion proteins from Escherichia coli | PDF (478 KB) - Purification of recombinant high molecular weight two-partner secretion proteins from Escherichia coli
Subject Categories: Detection and probing | Isolation, purification and separation
Gel-based mass spectrometric analysis of a strongly hydrophobic GABAA-receptor subunit containing four transmembrane domains - pp1093 - 1102
Sung-Ung Kang, Karoline Fuchs, Werner Sieghart, Arnold Pollak, Edina Csaszar & Gert Lubec
Published online: 02 July 2009 | doi:10.1038/nprot.2009.92
Abstract - Gel-based mass spectrometric analysis of a strongly hydrophobic GABA: A: -receptor subunit containing four transmembrane domains | Full Text - Gel-based mass spectrometric analysis of a strongly hydrophobic GABAA-receptor subunit containing four transmembrane domains | PDF (492 KB) - Gel-based mass spectrometric analysis of a strongly hydrophobic GABAA-receptor subunit containing four transmembrane domains | Supplementary information
Subject Categories: Detection and probing | Isolation, purification and separation | Structural analysis
