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| Open AccessDendrogenin A drives LXR to trigger lethal autophagy in cancers
Dendrogenin A, cholesterol metabolite, has tumor suppressive properties but the mechanisms are unknown. Here the authors show that Dendrogenin A can induce autophagy-mediated cell death in both melanoma and acute myeloid leukaemia.
- Gregory Segala
- , Marion David
- & Sandrine Silvente-Poirot
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Article
| Open AccessSmall molecule screen in embryonic zebrafish using modular variations to target segmentation
Chemical screens can identify small molecules that affect biological development, with potential therapeutic value. Here, the authors use a modular approach in a screen in zebrafish embryos, varying concentration, genotype and timing to target segmentation disorders, birth defects that affect the spinal column.
- Sandra Richter
- , Ulrike Schulze
- & Andrew C. Oates
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| Open AccessNano-enabled pancreas cancer immunotherapy using immunogenic cell death and reversing immunosuppression
Pancreatic cancer remains difficult to treat mainly due to the drug delivery challenges posed by a strong stromal component. Here the authors develop nanocarriers that improve drug delivery efficiency and engage the host immune system against the tumor resulting in reduction of tumor growth and metastasis.
- Jianqin Lu
- , Xiangsheng Liu
- & Andre E. Nel
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| Open AccessStructural insights into substrate and inhibitor binding sites in human indoleamine 2,3-dioxygenase 1
Human indoleamine 2,3-dioxygenase 1 (hIDO1) is an immunotherapeutic target for cancer therapy. Here, the authors present the substrate-, inhibitor- and effector-bound hIDO1 crystal structures, which give insights into the mechanism and reveal a second small molecule binding site, which is of interest for drug design.
- Ariel Lewis-Ballester
- , Khoa N. Pham
- & Syun-Ru Yeh
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Article
| Open AccessAn unexpected protein interaction promotes drug resistance in leukemia
ABCC4 is a chemotherapeutic drug exporter highly expressed in acute myeloid leukemia. Here, the authors demonstrate that MPP1 anchors ABCC4 to the outer cell membrane mediating drug resistance in leukemic cells and identify antimycin A as a chemical probe that disrupts such interaction and restores sensitivity.
- Aaron Pitre
- , Yubin Ge
- & John D. Schuetz
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| Open AccessAssay interference and off-target liabilities of reported histone acetyltransferase inhibitors
A substantial obstacle in basic research is the use of poorly validated tool compounds with purported useful biological functions. Here, the authors systematically profile widely used histone acetyltransferase inhibitors and find that the majority are nonselective interference compounds.
- Jayme L. Dahlin
- , Kathryn M. Nelson
- & Michael A. Walters
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Article
| Open AccessBinding to SMN2 pre-mRNA-protein complex elicits specificity for small molecule splicing modifiers
Small molecules correcting the splicing deficit of the survival of motor neuron 2 (SMN2) gene have been identified as having therapeutic potential. Here, the authors provide evidence that SMN2 mRNA forms a ribonucleoprotein complex that can be specifically targeted by these small molecules.
- Manaswini Sivaramakrishnan
- , Kathleen D. McCarthy
- & Friedrich Metzger
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| Open AccessOrganocatalytic enantio- and diastereoselective cycloetherification via dynamic kinetic resolution of chiral cyanohydrins
Enantioselective synthesis of six-membered oxacycles with multiple stereogenic centres is essential for the discovery of new therapeutic agents. Here the authors show organocatalytic cycloetherification for the highly enantio- and diastereoselective synthesis of tetrahydropyrans.
- Naoki Yoneda
- , Yuki Fujii
- & Seijiro Matsubara
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Article
| Open AccessIdentifying host regulators and inhibitors of liver stage malaria infection using kinase activity profiles
Host kinases facilitate Plasmodium liver stage (LS) infection, but systematic accounting of important players is lacking. Here, the authors use a computational approach and kinase activity profiles to identify host kinase regulators of LS infection and drugs that could eliminate parasite burden.
- Nadia Arang
- , Heather S. Kain
- & Alexis Kaushansky
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| Open AccessDiversity oriented biosynthesis via accelerated evolution of modular gene clusters
Reengineering polyketide synthase encoding genes to produce analogues of natural products can be slow and low-yielding. Here the authors use accelerated evolution to recombine the gene cluster for rapid production of rapamycin-related products.
- Aleksandra Wlodek
- , Steve G. Kendrew
- & Matthew A. Gregory
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Article
| Open AccessA potent small-molecule inhibitor of the DCN1-UBC12 interaction that selectively blocks cullin 3 neddylation
Cullins are central components of the ubiquitin-proteosome system and are activated via a neddylation process mediated by the DCN1–UBC12 complex. Here, the authors develop a small molecule inhibitor of the DCN1–UBC12 interaction that specifically blocks cullin 3 neddylation and can be used to probe the cellular function of cullin 3.
- Haibin Zhou
- , Jianfeng Lu
- & Shaomeng Wang
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Article
| Open AccessA novel Fer/FerT targeting compound selectively evokes metabolic stress and necrotic death in malignant cells
The tyrosine-kinases Fer/FerT associate with the mitochondrial electron transport chain in cancer cells supporting their metabolic reprogramming. Here the authors discover a compound that disrupts Fer /FerT activity and selectively induces cell death of cancer cell lines displaying anti-tumor activity in vivo.
- Yoav Elkis
- , Moshe Cohen
- & Uri Nir
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Article
| Open AccessMyoblasts and macrophages are required for therapeutic morpholino antisense oligonucleotide delivery to dystrophic muscle
Exon skipping is a strategy for the treatment of Duchenne muscular dystrophy, but has variable efficacy. Here, the authors show that dystrophin restoration occurs preferentially in areas of myofiber regeneration, where antisense oligonucleotides are stored in macrophages and delivered to myoblasts and newly formed myotubes
- James S. Novak
- , Marshall W. Hogarth
- & Terence A. Partridge
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Article
| Open AccessHigh-fidelity DNA replication in Mycobacterium tuberculosis relies on a trinuclear zinc center
The polymerase and histidinol phosphatase (PHP) domain in the DNA polymerase DnaE1 is essential for mycobacterial high-fidelity DNA replication. Here, the authors determine the DnaE1 crystal structure, which reveals the PHP-exonuclease mechanism that can be exploited for antibiotic development.
- Soledad Baños-Mateos
- , Anne-Marie M. van Roon
- & Meindert H. Lamers
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| Open AccessThe quaternary architecture of RARβ–RXRα heterodimer facilitates domain–domain signal transmission
Nuclear receptors (NR) are multidomain proteins, which makes their crystallization challenging. Here the authors present the crystal structure of the retinoic acid receptor β–retinoic X receptor α (RARβ–RXRα) heterodimer bound to DNA, ligands and coactivator peptides, which shows that NR quaternary architectures are variable.
- Vikas Chandra
- , Dalei Wu
- & Fraydoon Rastinejad
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Article
| Open AccessMechanistic understanding of in vivo protein corona formation on polymeric nanoparticles and impact on pharmacokinetics
Understanding the interaction between nanoparticles and biomolecules is crucial for improving current drug-delivery systems. Here, the authors shed light on the essential role of the surface and other physicochemical properties of a library of nanoparticles on their in vivo pharmacokinetics.
- Nicolas Bertrand
- , Philippe Grenier
- & Omid C. Farokhzad
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| Open AccessExtrapyramidal side effects of antipsychotics are linked to their association kinetics at dopamine D2 receptors
Atypical antipsychotics show reduced extrapyramidal side effects compared to first generation drugs. Here the authors use time-resolved FRET to measure binding kinetics, and show that side effects correlate with drug association rates to the D2 receptor, while dissociation rates correlate with prolactin elevation.
- David A. Sykes
- , Holly Moore
- & Steven J. Charlton
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Article
| Open AccessSPA70 is a potent antagonist of human pregnane X receptor
The xenobiotic-activated human pregnane X receptor (hPXR) regulates drug metabolism. Here the authors develop hPXR modulators, which are of potential therapeutic interest and functionally and structurally characterize the antagonist SPA70 and the structurally related agonist SJB7.
- Wenwei Lin
- , Yue-Ming Wang
- & Taosheng Chen
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Article
| Open AccessSmall molecule inhibition of cGAS reduces interferon expression in primary macrophages from autoimmune mice
Upon DNA binding cyclic GMP-AMP synthase (cGAS) produces a cyclic dinucleotide, which leads to the upregulation of inflammatory genes. Here the authors develop small molecule cGAS inhibitors, functionally characterize them and present the inhibitor and DNA bound cGAS crystal structures, which will facilitate drug development.
- Jessica Vincent
- , Carolina Adura
- & Manuel Ascano
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| Open AccessPrinting of small molecular medicines from the vapor phase
Traditional approaches used in the pharmaceutical industry are not precise or versatile enough for customized medicine formulation and manufacture. Here the authors produce a method to form coatings, with accurate dosages, as well as a means of closely controlling dissolution kinetics.
- Olga Shalev
- , Shreya Raghavan
- & Max Shtein
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Article
| Open AccessMicroRNA-9 downregulates the ANO1 chloride channel and contributes to cystic fibrosis lung pathology
Downregulation of the anoctamin 1 calcium channel in airway epithelial cells contributes to pathology in cystic fibrosis. Here the authors show that microRNA-9 targets anoctamin 1 and that inhibiting this interaction improves mucus dynamics in mouse models.
- Florence Sonneville
- , Manon Ruffin
- & Olivier Tabary
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Article
| Open AccessSerial millisecond crystallography for routine room-temperature structure determination at synchrotrons
Serial crystallography was developed for protein crystal data collection with X-ray free-electron lasers. Here the authors present several examples which show that serial crystallography using high-viscosity injectors can also be routinely employed for room-temperature data collection at synchrotrons.
- Tobias Weinert
- , Natacha Olieric
- & Jörg Standfuss
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| Open AccessA potent series targeting the malarial cGMP-dependent protein kinase clears infection and blocks transmission
Protein kinases are promising drug targets for treatment of malaria. Here, starting with a medicinal chemistry approach, Baker et al. generate an imidazopyridine that selectively targets Plasmodium falciparum PKG, inhibits blood stage parasite growth in vitro and in mice and blocks transmission to mosquitoes.
- David A. Baker
- , Lindsay B. Stewart
- & Simon A. Osborne
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| Open AccessIdentification of HSP90 inhibitors as a novel class of senolytics
The accumulation of senescent cells is thought to contribute to the age-associated decline in tissue function. Here, the authors identify HSP90 inhibitors as a new class of senolytic compounds in an in vitro screening and show that administration of a HSP90 inhibitor reduces age-related symptoms in progeroid mice.
- Heike Fuhrmann-Stroissnigg
- , Yuan Yuan Ling
- & Paul D. Robbins
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| Open AccessBiosynthesis of ilamycins featuring unusual building blocks and engineered production of enhanced anti-tuberculosis agents
Tuberculosis (TB) remains one of the world’s deadliest communicable diseases, novel anti-TB agents are urgently needed due to severe drug resistance and the co-epidemic of TB/HIV. Here, the authors show that anti-mycobacterial ilamycin congeners bearing unusual structural units possess extremely potent anti-tuberculosis activities.
- Junying Ma
- , Hongbo Huang
- & Jianhua Ju
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Article
| Open AccessMechanistic and structural basis for activation of cardiac myosin force production by omecamtiv mecarbil
Omecamtiv mecarbil (OM) is a cardiac myosin activator that is currently in clinical trials for heart failure treatment. Here, the authors give insights into its mode of action and present the crystal structure of OM bound to bovine cardiac myosin, which shows that OM stabilizes the pre-powerstroke state of myosin.
- Vicente J. Planelles-Herrero
- , James J. Hartman
- & Anne Houdusse
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| Open AccessTherapeutic efficacy of a respiratory syncytial virus fusion inhibitor
Respiratory syncytial virus causes lung infections in children, immunocompromised adults, and in the elderly. Here the authors show that a chemical inhibitor to a viral fusion protein is effective in reducing viral titre and ameliorating infection in rodents and neonatal lambs.
- Dirk Roymans
- , Sarhad S Alnajjar
- & Anil Koul
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| Open AccessA peptide-based viral inactivator inhibits Zika virus infection in pregnant mice and fetuses
Zika virus (ZIKV) has spread rapidly in recent years and there is a need for antiviral treatments. Here, the authors develop an antiviral peptide, based on the stem region of ZIKV envelope protein, and show that it is safe in pregnant mice and inhibits ZIKV infection in pregnant mice and fetuses.
- Yufeng Yu
- , Yong-Qiang Deng
- & Lu Lu
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| Open AccessPLATE-Seq for genome-wide regulatory network analysis of high-throughput screens
Despite the importance of pharmacological and functional genomic screens the readouts are of low complexity. Here the authors introduce PLATE-Seq, a low-cost genome-wide mRNA profiling method to complement high-throughput screening.
- Erin C. Bush
- , Forest Ray
- & Peter A. Sims
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Article
| Open AccessPrioritizing multiple therapeutic targets in parallel using automated DNA-encoded library screening
Encoded Library Technology (ELT) has streamlined the identification of chemical ligands for protein targets in drug discovery. Here, the authors optimize the ELT approach to screen multiple proteins in parallel and identify promising targets and antibacterial compounds forS. aureus, A. baumannii and M. tuberculosis.
- Carl A. Machutta
- , Christopher S. Kollmann
- & Ghotas Evindar
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| Open AccessAcylated heptapeptide binds albumin with high affinity and application as tag furnishes long-acting peptides
A major challenge for the application of peptide therapeutics is their short half-lifein vivo. Here, the authors design peptide-fatty acid chimeras bearing an engineered linker that promotes albumin binding and allows longer circulation times of therapeutic peptides in animal models.
- Alessandro Zorzi
- , Simon J. Middendorp
- & Christian Heinis
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Article
| Open AccessReversal of cancer gene expression correlates with drug efficacy and reveals therapeutic targets
Increased availability of large-scale molecular profiling has enabled system-level monitoring of molecular effects of candidate therapeutics. Here, the authors take advantage of such data to show that the ability of a drug to reverse cancer-associated gene expression changes is indicative of itsin vitroanti-proliferative efficacy, allowing them to identify novel compounds against liver cancer.
- Bin Chen
- , Li Ma
- & Atul J. Butte
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Article
| Open AccessEndosomal NOX2 oxidase exacerbates virus pathogenicity and is a target for antiviral therapy
Production of reactive oxygen species is an ancient antimicrobial mechanism, but its role in antiviral defense in mammals is unclear. Here, To et al. show that virus infection activates endosomal NOX2 oxidase and restricts TLR7 signaling, and that an endosomal NOX2 inhibitor decreases viral pathogenicity.
- Eunice E. To
- , Ross Vlahos
- & Stavros Selemidis
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| Open AccessA novel humanized mouse lacking murine P450 oxidoreductase for studying human drug metabolism
Human liver chimeric mice are increasingly used for drug testing in preclinical development, but express residual murine p450 cytochromes. Here the authors generate mice lacking the Por gene in the liver, and show that human cytochrome metabolism is used following repopulation with human hepatocytes.
- Mercedes Barzi
- , Francis P. Pankowicz
- & Karl-Dimiter Bissig
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| Open AccessStructural and mechanistic basis of differentiated inhibitors of the acute pancreatitis target kynurenine-3-monooxygenase
Kynurenine-3-monooxygenase (KMO) is an emerging clinical target for treatment of neurodegenerative diseases and acute pancreatitis. Here, the authors report potent inhibitors that bind KMO in an unexpected conformation, offering structural and mechanistic insights for future drug discovery ventures.
- Jonathan P. Hutchinson
- , Paul Rowland
- & Chun-wa Chung
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Article
| Open AccessA covalent PIN1 inhibitor selectively targets cancer cells by a dual mechanism of action
PIN1 is a promising therapeutic target for cancer treatment. In this study, the authors identify a covalent inhibitor of PIN1 with anti-tumour and anti-metastatic properties thanks to PIN1 inactivation and to the release, after binding to PIN1, of a quinone-mimicking compound that elicits reactive oxygen generation and causes DNA damage.
- Elena Campaner
- , Alessandra Rustighi
- & Giannino Del Sal
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Article
| Open AccessAntisense oligonucleotide-mediated Dnm2 knockdown prevents and reverts myotubular myopathy in mice
X-linked myotubular myopathy is caused by mutations in the gene coding for myotubularin 1, and is characterized by overexpression of dynamin 2. Here the authors develop antisense oligonucleotides to dynamin 2, and show that systemic injection leads to improved pathology in mice.
- Hichem Tasfaout
- , Suzie Buono
- & Jocelyn Laporte
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Article
| Open AccessBlood-brain-barrier spheroids as an in vitro screening platform for brain-penetrating agents
In vitroblood-brain barrier (BBB) models are crucial tools for screening brain-penetrating compounds. Here the authors develop a self-assembling BBB spheroid model with superior performance to the standard transwell BBB model, and use their platform to identify cell-penetrating peptides that can cross the BBB.
- Choi-Fong Cho
- , Justin M. Wolfe
- & Sean E. Lawler
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Article
| Open AccessSystematic discovery of mutation-specific synthetic lethals by mining pan-cancer human primary tumor data
There are no robust methods for systematically identifying mutation-specific synthetic lethal (SL) partners in cancer. Here, the authors develop a computational algorithm that uses pan-cancer data to detect mutation-andcancer-specific SL partners and they validate a novel SL interaction between mutant IDH and loss of ACACA in leukaemia.
- Subarna Sinha
- , Daniel Thomas
- & David L. Dill
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Article
| Open AccessDiscovery of first-in-class reversible dual small molecule inhibitors against G9a and DNMTs in hematological malignancies
Epigenetic drugs are emerging as a powerful therapeutic option for cancer treatment. Here, the authors synthesized selective chemical probes that simultaneously inhibit the G9a and DNMTs methyltransferase activity and demonstrate their anti-tumour activity usingin vitro and in vivomodels of haematological neoplasia.
- Edurne San José-Enériz
- , Xabier Agirre
- & Felipe Prosper
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Article
| Open AccessA tetraoxane-based antimalarial drug candidate that overcomes PfK13-C580Y dependent artemisinin resistance
Artemisinin-resistantPlasmodium is an increasing problem. Here, using a medicinal chemistry programme, the authors identify a tetraoxane-based drug candidate that shows no cross-resistance with an artemisinin-resistant strain (PfK13-C580Y) and is efficient in Plasmodiummouse models.
- Paul M. O’Neill
- , Richard K. Amewu
- & Stephen A. Ward
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Article
| Open AccesspSILAC mass spectrometry reveals ZFP91 as IMiD-dependent substrate of the CRL4CRBN ubiquitin ligase
Targeting therapeutically-relevant proteins for degradation is an emerging paradigm in drug discovery. Here the authors describe a sensitive pulse SILAC mass spectrometry-based proteomics approach that reports global changes in protein stability following drug treatment in a single time point experiment.
- Jian An
- , Charles M. Ponthier
- & Eric S. Fischer
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Article
| Open AccessSelective BET bromodomain inhibition as an antifungal therapeutic strategy
BET proteins bind chromatin through their bromodomains (BDs) to regulate transcription and chromatin remodelling. Here, the authors show that the BET protein Bdf1 is essential for the fungal pathogenCandida albicans, and report compounds that inhibit the Bdf1 BDs with high selectivity over human BDs.
- Flore Mietton
- , Elena Ferri
- & Carlo Petosa
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| Open AccessHundreds of dual-stage antimalarial molecules discovered by a functional gametocyte screen
There is a need forPlasmodium transmission blocking drugs for malaria elimination. Here, Miguel-Blanco et al. screen >10,000 compounds against stage V female gametocytes, identify active compounds belonging to 57 chemotypes and confirm transmission blocking activity of four selected compounds in vitro.
- Celia Miguel-Blanco
- , Irene Molina
- & Esperanza Herreros
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Article
| Open AccessNon-cell-autonomous activation of IL-6/STAT3 signaling mediates FGF19-driven hepatocarcinogenesis
Fibroblast Growth Factor 19 (FGF19) neutralizing antibodies inhibit hepatocellular carcinoma (HCC) growth but have safety issues. Here, the authors show that FGF19 promotes HCC by activating STAT3 signalling via IL-6 production and that targeting IL-6 pathway abolishes FGF19-induced HCC without side effects.
- Mei Zhou
- , Hong Yang
- & Lei Ling
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Article
| Open AccessActivin A more prominently regulates muscle mass in primates than does GDF8
Inhibition of GDF8 increases muscle mass in mice, but is less effective in monkeys and humans. Here the authors show that activin A also inhibits muscle hypertrophy and that concomitant inhibition of activin A and GDF8 synergistically increases muscle mass in mice and non-human primates.
- Esther Latres
- , Jason Mastaitis
- & Jesper Gromada
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Article
| Open AccessMacrocycle peptides delineate locked-open inhibition mechanism for microorganism phosphoglycerate mutases
River blindness, a disease affecting millions throughout the tropics, is caused by parasitic worms. Here, Yuet al. report the discovery and structural characterization of potent macrocyclic peptide inhibitors of iPGM, a nematode-specific phosphoglycerate mutase, as potential leads for novel antimicrobial agents.
- Hao Yu
- , Patricia Dranchak
- & James Inglese
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Article
| Open AccessStructure and antagonism of the receptor complex mediated by human TSLP in allergy and asthma
The pro-inflammatory cytokine thymic stromal lymphopoietin (TSLP) is a promising therapeutic target. Here the authors characterize the assembly mechanism of the receptor complex driven by human TSLP, and its antagonism by the monoclonal antibody Tezepelumab and a fusion protein comprising the TSLP receptors.
- Kenneth Verstraete
- , Frank Peelman
- & Savvas N. Savvides
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| Open AccessSteviol glycosides enhance pancreatic beta-cell function and taste sensation by potentiation of TRPM5 channel activity
Steviol glycosides are sweet-tasting compounds isolated from a South American shrub and are increasingly used as sweeteners in foods and beverages. Philippaertet al. demonstrate that steviol glycosides potentiate Ca2+-dependent TRPM5 activity and promote glucose-induced insulin secretion and glucose tolerance.
- Koenraad Philippaert
- , Andy Pironet
- & Rudi Vennekens