Featured
-
-
Article
| Open Access
Inference of transcriptome signatures of Escherichia coli in long-term stationary phase
- Sotaro Takano
- , Hiromi Takahashi
- & Saburo Tsuru
-
Article
| Open Access
Comparison of rRNA depletion methods for efficient bacterial mRNA sequencing
- Anika Wahl
- , Christopher Huptas
- & Klaus Neuhaus
-
Article
| Open Access
Transcriptomics differentiate two novel bioactive strains of Paenibacillus sp. isolated from the perennial ryegrass seed microbiome
- Tongda Li
- , Ross Mann
- & Timothy Sawbridge
-
Article
| Open Access
Cobalamin is present in cells of non-tuberculous mycobacteria, but not in Mycobacterium tuberculosis
- Alina Minias
- , Filip Gąsior
- & Jarosław Dziadek
-
Article
| Open Access
The carbon source-dependent pattern of antimicrobial activity and gene expression in Pseudomonas donghuensis P482
- Marta Matuszewska
- , Tomasz Maciąg
- & Sylwia Jafra
-
Article
| Open Access
Bacteria-host transcriptional response during endothelial invasion by Staphylococcus aureus
- Rasmus Birkholm Grønnemose
- , Christian Garde
- & Thomas Emil Andersen
-
Article
| Open Access
The novel ECF56 SigG1-RsfG system modulates morphological differentiation and metal-ion homeostasis in Streptomyces tsukubaensis
- Rute Oliveira
- , Matthew J. Bush
- & Marta V. Mendes
-
Article
| Open Access
Identification of two fnr genes and characterisation of their role in the anaerobic switch in Sphingopyxis granuli strain TFA
- Yolanda Elisabet González-Flores
- , Rubén de Dios
- & Eduardo Santero
-
Article
| Open Access
Systems evaluation reveals novel transporter YohJK renders 3-hydroxypropionate tolerance in Escherichia coli
- Thuan Phu Nguyen-Vo
- , Seyoung Ko
- & Sunghoon Park
-
Article
| Open Access
Mutational analysis of Escherichia coli GreA protein reveals new functional activity independent of antipause and lethal when overexpressed
- Llorenç Fernández-Coll
- , Katarzyna Potrykus
- & Carlos Balsalobre
-
Article
| Open Access
A central role for the transcriptional regulator VtlR in small RNA-mediated gene regulation in Agrobacterium tumefaciens
- James A. Budnick
- , Lauren M. Sheehan
- & Clayton C. Caswell
-
Article
| Open Access
Circadian clock-controlled gene expression in co-cultured, mat-forming cyanobacteria
- Christine Hörnlein
- , Veronique Confurius-Guns
- & Henk Bolhuis
-
Article
| Open Access
Transcriptional portrait of M. bovis BCG during biofilm production shows genes differentially expressed during intercellular aggregation and substrate attachment
- Mario Alberto Flores-Valdez
- , Michel de Jesús Aceves-Sánchez
- & María Guadalupe Espinoza-Jorge
-
Article
| Open Access
Establishment of an in vitro RNA polymerase transcription system: a new tool to study transcriptional activation in Borrelia burgdorferi
- William K. Boyle
- , Laura S. Hall
- & Travis J. Bourret
-
Article
| Open Access
Two paralogous EcfG σ factors hierarchically orchestrate the activation of the General Stress Response in Sphingopyxis granuli TFA
- Rubén de Dios
- , Elena Rivas-Marin
- & Francisca Reyes-Ramírez
-
Article
| Open Access
Transcriptome analysis of polysaccharide-based microbial flocculant MBFA9 biosynthesis regulated by nitrogen source
- Lili Fu
- , Binhui Jiang
- & Li Zhang
-
Article
| Open Access
Regulatory Role of PlaR (YiaJ) for Plant Utilization in Escherichia coli K-12
- Tomohiro Shimada
- , Yui Yokoyama
- & Akira Ishihama
-
Article
| Open Access
Regulation of vanillate and syringate catabolism by a MarR-type transcriptional regulator DesR in Sphingobium sp. SYK-6
- Takuma Araki
- , Shusuke Umeda
- & Eiji Masai
-
Article
| Open Access
Staphylococcus aureus ClpX localizes at the division septum and impacts transcription of genes involved in cell division, T7-secretion, and SaPI5-excision
- Camilla Jensen
- , Marie J. Fosberg
- & Dorte Frees
-
Article
| Open Access
Selection of reference genes for measuring the expression of aiiO in Ochrobactrum quorumnocens A44 using RT-qPCR
- Dorota M. Krzyżanowska
- , Anna Supernat
- & Sylwia Jafra
-
Article
| Open Access
Coordinate regulation of the expression of SdsR toxin and its downstream pphA gene by RyeA antitoxin in Escherichia coli
- Jee Soo Choi
- , Hongmarn Park
- & Younghoon Lee
-
Article
| Open Access
Complex general stress response regulation in Sphingomonas melonis Fr1 revealed by transcriptional analyses
- Lisa Gottschlich
- , Petra Geiser
- & Julia A. Vorholt
-
Article
| Open Access
Transcriptional profiling of coaggregation interactions between Streptococcus gordonii and Veillonella parvula by Dual RNA-Seq
- Naresh V. R. Mutha
- , Waleed K. Mohammed
- & Nicholas S. Jakubovics
-
Article
| Open Access
A role for Vibrio vulnificus PecS during hypoxia
- Nabanita Bhattacharyya
- , Tiffany L. Lemon
- & Anne Grove
-
Article
| Open Access
Transcriptomic studies and assessment of Yersinia pestis reference genes in various conditions
- Lionel Koch
- , Thomas Poyot
- & Fabrice Biot
-
Article
| Open Access
The NnaR orphan response regulator is essential for the utilization of nitrate and nitrite as sole nitrogen sources in mycobacteria
- Magdalena Antczak
- , Renata Płocińska
- & Jarosław Dziadek
-
Article
| Open Access
Transcriptome analysis of extended-spectrum β-lactamase-producing Escherichia coli and methicillin-resistant Staphylococcus aureus exposed to cefotaxime
- P. R. Brochmann
- , A. Hesketh
- & L. Guardabassi
-
Article
| Open Access
The serine/threonine kinase Stk and the phosphatase Stp regulate cell wall synthesis in Staphylococcus aureus
- Marcel Jarick
- , Ute Bertsche
- & Knut Ohlsen
-
Article
| Open Access
Regulation of biomass degradation by alternative σ factors in cellulolytic clostridia
- Lizett Ortiz de Ora
- , Raphael Lamed
- & Iván Muñoz-Gutiérrez
-
Article
| Open Access
Inactivation of group 2 σ factors upregulates production of transcription and translation machineries in the cyanobacterium Synechocystis sp. PCC 6803
- Satu Koskinen
- , Kaisa Hakkila
- & Taina Tyystjärvi
-
Article
| Open Access
BlsA integrates light and temperature signals into iron metabolism through Fur in the human pathogen Acinetobacter baumannii
- Marisel R. Tuttobene
- , Pamela Cribb
- & María Alejandra Mussi
-
Article
| Open Access
Regulation of metabolism in Escherichia coli during growth on mixtures of the non-glucose sugars: arabinose, lactose, and xylose
- Ehab M. Ammar
- , Xiaoyi Wang
- & Christopher V. Rao
-
Article
| Open Access
Model-based genome-wide determination of RNA chain elongation rates in Escherichia coli
- Peter Großmann
- , Anja Lück
- & Christoph Kaleta
-
Article
| Open Access
Transcriptome responses of Streptococcus mutans to peroxide stress: identification of novel antioxidant pathways regulated by Spx
- Jessica K. Kajfasz
- , Tridib Ganguly
- & José A. Lemos
-
Article
| Open Access
Differential impact of lipopolysaccharide defects caused by loss of RfaH in Yersinia pseudotuberculosis and Yersinia pestis
- Jared M. Hoffman
- , Shea Sullivan
- & David L. Erickson
-
Article
| Open Access
Delayed effects of transcriptional responses in Mycobacterium tuberculosis exposed to nitric oxide suggest other mechanisms involved in survival
- Teresa Cortes
- , Olga T. Schubert
- & Douglas B. Young
-
Article
| Open Access
A positive feedback loop mediated by Sigma X enhances expression of the streptococcal regulator ComR
- Rabia Khan
- , Roger Junges
- & Fernanda C. Petersen
-
Article
| Open Access
Mapping and characterization of G-quadruplexes in Mycobacterium tuberculosis gene promoter regions
- Rosalba Perrone
- , Enrico Lavezzo
- & Sara N. Richter
-
Article
| Open Access
Caulobacter crescentus CdnL is a non-essential RNA polymerase-binding protein whose depletion impairs normal growth and rRNA transcription
- Aránzazu Gallego-García
- , Antonio A. Iniesta
- & Montserrat Elías-Arnanz
-
Article
| Open Access
Comparative evaluation of rRNA depletion procedures for the improved analysis of bacterial biofilm and mixed pathogen culture transcriptomes
- Olga E. Petrova
- , Fernando Garcia-Alcalde
- & Karin Sauer
-
Article
| Open Access
Transcriptomic analysis on the formation of the viable putative non-culturable state of beer-spoilage Lactobacillus acetotolerans
- Junyan Liu
- , Yang Deng
- & Mark E. Shirtliff
-
Article
| Open Access
Genes on a Wire: The Nucleoid-Associated Protein HU Insulates Transcription Units in Escherichia coli
- Michael Berger
- , Veneta Gerganova
- & Ulrich Dobrindt
-
Article
| Open Access
Electron acceptor redox potential globally regulates transcriptomic profiling in Shewanella decolorationis S12
- Yingli Lian
- , Yonggang Yang
- & Meiying Xu
-
Article
| Open Access
Dual promoters of the major catalase (KatA) govern distinct survival strategies of Pseudomonas aeruginosa
- In-Young Chung
- , Bi-o Kim
- & You-Hee Cho
-
Article
| Open Access
Novel TetR family transcriptional factor regulates expression of multiple transport-related genes and affects rifampicin resistance in Mycobacterium smegmatis
- Huicong Liu
- , Min Yang
- & Zheng-Guo He
-
Article
| Open Access
Redox proteins of hydroxylating bacterial dioxygenases establish a regulatory cascade that prevents gratuitous induction of tetralin biodegradation genes
- Laura Ledesma-García
- , Ana Sánchez-Azqueta
- & Eduardo Santero
-
Article
| Open Access
Streptococcus mutans copes with heat stress by multiple transcriptional regulons modulating virulence and energy metabolism
- Chengcheng Liu
- , Yulong Niu
- & Xin Xu
-
Article
| Open Access
RNA-seq reveals the critical role of OtpR in regulating Brucella melitensis metabolism and virulence under acidic stress
- Wenxiao Liu
- , Hao Dong
- & Qingmin Wu
-
Article
| Open Access
Transcriptome analysis of the biofilm formed by methicillin-susceptible Staphylococcus aureus
- Xiaojuan Tan
- , Nan Qin
- & Aiqun Jia
Identification and evolution of nsLTPs in the root nodule nitrogen fixation clade and molecular response of Frankia to AgLTP24