Featured
-
-
Article
| Open Access
Bacterial diversity dominates variable macrophage responses of tuberculosis patients in Tanzania
- Hellen Hiza
- , Michaela Zwyer
- & Damien Portevin
-
Article
| Open Access
Comprehensive insights into the impact of bacterial indole-3-acetic acid on sensory preferences in Drosophila melanogaster
- Raifa Abdul Aziz
- , Poornima Ramesh
- & Asif Hameed
-
Article
| Open Access
Planctoellipticum variicoloris gen. nov., sp. nov., a novel member of the family Planctomycetaceae isolated from wastewater of the aeration lagoon of a sugar processing plant in Northern Germany
- Carmen E. Wurzbacher
- , Tom Haufschild
- & Christian Jogler
-
Article
| Open Access
Whole genome sequencing of methicillin-resistant Staphylococcus aureus clinical isolates from Terengganu, Malaysia, indicates the predominance of the EMRSA-15 (ST22-SCCmec IV) clone
- Ainal Mardziah Che Hamzah
- , Ching Hoong Chew
- & Chew Chieng Yeo
-
Article
| Open Access
Genomic landscape of NDM-1 producing multidrug-resistant Providencia stuartii causing burn wound infections in Bangladesh
- Spencer Mark Mondol
- , Israt Islam
- & Md. Mizanur Rahaman
-
Article
| Open Access
Whole genome sequencing provides evidence for Bacillus velezensis SH-1471 as a beneficial rhizosphere bacterium in plants
- Yunxin Shen
- , Zhufeng Shi
- & Peiweng Yang
-
Article
| Open Access
Antimicrobial resistance and whole genome sequencing of novel sequence types of Enterococcus faecalis, Enterococcus faecium, and Enterococcus durans isolated from livestock
- Mohamed E. El Zowalaty
- , Bibek Lamichhane
- & Yosra A. Helmy
-
Article
| Open Access
Whole genome sequencing of increased number of azithromycin-resistant Shigella flexneri 1b isolates in Ontario
- Alefiya Neemuchwala
- , Sandra Zittermann
- & Samir.N. Patel
-
Article
| Open Access
The oxidoreductase activity of Rnf balances redox cofactors during fermentation of glucose to propionate in Prevotella
- Bo Zhang
- , Christopher Lingga
- & Timothy J. Hackmann
-
Article
| Open Access
Genomic and phenotypic characterization of Acinetobacter colistiniresistens isolated from the feces of a healthy member of the community
- Nazmul Hasan Muzahid
- , Muhammad Zarul Hanifah Md Zoqratt
- & Sadequr Rahman
-
Article
| Open Access
Genomic features of Klebsiella isolates from artisanal ready-to-eat food production facilities
- Cecilia Crippa
- , Frédérique Pasquali
- & Federica Palma
-
Article
| Open Access
DSF inactivator RpfB homologous FadD upregulated in Bradyrhizobium japonicum under iron limiting conditions
- Kunal Dutta
- , Sergey Shityakov
- & Fumito Maruyama
-
Article
| Open Access
Emergence of community-associated methicillin-resistant Staphylococcus aureus ΨUSA300 among Japanese people with HIV, resulted from stepwise mutations in 2010s
- Koh Shinohara
- , Yuki Uehara
- & Shinichi Oka
-
Article
| Open Access
Systematic analysis of prophage elements in actinobacterial genomes reveals a remarkable phylogenetic diversity
- Vikas Sharma
- , Max Hünnefeld
- & Julia Frunzke
-
Article
| Open Access
Subspecies-level genome comparison of Lactobacillus delbrueckii
- Min-gyung Baek
- , Kwan Woo Kim
- & Hana Yi
-
Article
| Open Access
Geography shapes the genomics and antimicrobial resistance of Salmonella enterica Serovar Enteritidis isolated from humans
- Guojie Cao
- , Shaohua Zhao
- & Jie Zheng
-
Article
| Open Access
Reclassification of eight Akkermansia muciniphila strains and description of Akkermansia massiliensis sp. nov. and Candidatus Akkermansia timonensis, isolated from human feces
- Sokhna Ndongo
- , Nicholas Armstrong
- & Pierre-Edouard Fournier
-
Article
| Open Access
Characterization, genome analysis and genetic tractability studies of a new nanocellulose producing Komagataeibacter intermedius isolate
- Pietro Cannazza
- , Antti J. Rissanen
- & Rahul Mangayil
-
Article
| Open Access
Characterization of antibiotic-resistance traits in Akkermansia muciniphila strains of human origin
- Rossella Filardi
- , Giorgio Gargari
- & Stefania Arioli
-
Article
| Open Access
Comparative and pangenomic analysis of the genus Streptomyces
- Hiroshi Otani
- , Daniel W. Udwary
- & Nigel J. Mouncey
-
Article
| Open Access
Analysis of the twenty-six largest outbreaks of tuberculosis in Aragon using whole-genome sequencing for surveillance purposes
- Jessica Comín
- , Alberto Cebollada
- & Sofía Samper
-
Article
| Open Access
Unravelling the DNA sequences carried by Streptomyces coelicolor membrane vesicles
- Teresa Faddetta
- , Alberto Vassallo
- & Anna Maria Puglia
-
Article
| Open Access
Massive annotation of bacterial l-asparaginases reveals their puzzling distribution and frequent gene transfer events
- Andrzej Zielezinski
- , Joanna I. Loch
- & Mariusz Jaskolski
-
Article
| Open Access
Genomic epidemiological analysis of Klebsiella pneumoniae from Portuguese hospitals reveals insights into circulating antimicrobial resistance
- Anton Spadar
- , Jody Phelan
- & Taane G. Clark
-
Article
| Open Access
Genomic analysis of hypervirulent Klebsiella pneumoniae reveals potential genetic markers for differentiation from classical strains
- Anton Spadar
- , João Perdigão
- & Taane G. Clark
-
Article
| Open Access
Non-random genetic alterations in the cyanobacterium Nostoc sp. exposed to space conditions
- Yuguang Liu
- , Patricio Jeraldo
- & Marina Walther-Antonio
-
Article
| Open Access
Classification of the plant-associated lifestyle of Pseudomonas strains using genome properties and machine learning
- Wasin Poncheewin
- , Anne D. van Diepeningen
- & Peter J. Schaap
-
Article
| Open Access
Phenotypic characterization and analysis of complete genomes of two distinct strains of the proposed species “L. swaminathanii”
- Lauren K. Hudson
- , Harleen K. Chaggar
- & Thomas G. Denes
-
Article
| Open Access
A genome-wide scan of wastewater E. coli for genes under positive selection: focusing on mechanisms of antibiotic resistance
- Negin Malekian
- , Amay A. Agrawal
- & Michael Schroeder
-
Article
| Open Access
Chromosome-encoded IpaH ubiquitin ligases indicate non-human enteroinvasive Escherichia
- Natalia O. Dranenko
- , Maria N. Tutukina
- & Olga O. Bochkareva
-
Article
| Open Access
Genetic and virulence characteristics of a Raoultella planticola isolate resistant to carbapenem and tigecycline
- Ying Li
- , Yichuan Qiu
- & Luhua Zhang
-
Article
| Open Access
Isolation, characterization and comparative genomics of potentially probiotic Lactiplantibacillus plantarum strains from Indian foods
- Sarvesh Surve
- , Dasharath B. Shinde
- & Ram Kulkarni
-
Article
| Open Access
Genomic and functional characterization of bacteriocinogenic lactic acid bacteria isolated from Boza, a traditional cereal-based beverage
- Luciano Lopes Queiroz
- , Christian Hoffmann
- & Svetoslav Dimitrov Todorov
-
Article
| Open Access
Identification of putative essential protein domains from high-density transposon insertion sequencing
- A. S. M. Zisanur Rahman
- , Lukas Timmerman
- & Silvia T. Cardona
-
Article
| Open Access
Comparative evaluation of Nanopore polishing tools for microbial genome assembly and polishing strategies for downstream analysis
- Jin Young Lee
- , Minyoung Kong
- & Woori Kwak
-
Article
| Open Access
Distribution of bacteriocin genes in the lineages of Lactiplantibacillus plantarum
- Sungmi Choi
- , Min-gyung Baek
- & Hana Yi
-
Article
| Open Access
Porphyromonas spp., Fusobacterium spp., and Bacteroides spp. dominate microbiota in the course of macropod progressive periodontal disease
- Sabine Yip
- , Manijeh Mohammadi Dehcheshmeh
- & Darren J. Trott
-
Article
| Open Access
Whole genome sequencing reveals possible host species adaptation of Streptococcus dysgalactiae
- Davide Porcellato
- , Marit Smistad
- & Oddvar Oppegaard
-
Article
| Open Access
Transcriptomics differentiate two novel bioactive strains of Paenibacillus sp. isolated from the perennial ryegrass seed microbiome
- Tongda Li
- , Ross Mann
- & Timothy Sawbridge
-
Article
| Open Access
Probiotics: their action against pathogens can be turned around
- Lian Gan
- , Wei-Hua Xu
- & Yiying Liu
-
Article
| Open Access
Methylation analysis of Klebsiella pneumoniae from Portuguese hospitals
- Anton Spadar
- , João Perdigão
- & Taane G. Clark
-
Article
| Open Access
Phylogenetic and genetic characterization of Treponema pallidum strains from syphilis patients in Japan by whole-genome sequence analysis from global perspectives
- Shingo Nishiki
- , Kenichi Lee
- & Makoto Ohnishi
-
Article
| Open Access
The effect of taxonomic classification by full-length 16S rRNA sequencing with a synthetic long-read technology
- Jinuk Jeong
- , Kyeongeui Yun
- & Kyudong Han
-
Article
| Open Access
Estimation of pathogenic potential of an environmental Pseudomonas aeruginosa isolate using comparative genomics
- Carola Berger
- , Christian Rückert
- & Miriam A. Rosenbaum
-
Article
| Open Access
A glimpse of antimicrobial resistance gene diversity in kefir and yoghurt
- Adrienn Gréta Tóth
- , István Csabai
- & Norbert Solymosi
-
Article
| Open Access
A unique clade of light-driven proton-pumping rhodopsins evolved in the cyanobacterial lineage
- Masumi Hasegawa
- , Toshiaki Hosaka
- & Susumu Yoshizawa
-
Article
| Open Access
Twentieth-century emergence of antimicrobial resistant human- and bovine-associated Salmonella enterica serotype Typhimurium lineages in New York State
- Laura M. Carroll
- , Jana S. Huisman
- & Martin Wiedmann
-
Article
| Open Access
Global distribution of epidemic-related Shiga toxin 2 encoding phages among enteroaggregative Escherichia coli
- Keiko Kimata
- , Kenichi Lee
- & Sunao Iyoda
-
Article
| Open Access
Isolation, identification, and whole genome sequence analysis of the alginate-degrading bacterium Cobetia sp. cqz5-12
- Wenwen Cheng
- , Xuanyu Yan
- & Qiongzhen Chen
Genomic properties of a Bartonella quintana strain from Japanese macaque (Macaca fuscata) revealed by genome comparison with human and rhesus macaque strains