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| Open AccessSyntrophic entanglements for propionate and acetate oxidation under thermophilic and high-ammonia conditions
- Abhijeet Singh
- , Anna Schnürer
- & Maria Westerholm
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Functional conservation of microbial communities determines composition predictability in anaerobic digestion
- Qiang Lin
- , Lingjuan Li
- & Xiangzhen Li
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Gut microbial genetic variation modulates host lifespan, sleep, and motor performance
- Ying Li
- , Simin Xu
- & Zuobin Zhu
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Article
| Open AccessMetabolism of plant-derived toxins from its insect host increases the success of the entomopathogenic fungus Beauveria bassiana
- Ruo Sun
- , Benke Hong
- & Daniel Giddings Vassão
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Article
| Open AccessDelivery mechanism can enhance probiotic activity against honey bee pathogens
- Brendan A. Daisley
- , Andrew P. Pitek
- & Elina Niño
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| Open AccessTargeting Fusobacterium nucleatum through chemical modifications of host-derived transfer RNA fragments
- Mengdi Yang
- , Pu-Ting Dong
- & Jiahe Li
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Salinity determines performance, functional populations, and microbial ecology in consortia attenuating organohalide pollutants
- Guofang Xu
- , Xuejie Zhao
- & Jianzhong He
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Article
| Open AccessGenome-centric investigation of bile acid metabolizing microbiota of dairy cows and associated diet-induced functional implications
- Limei Lin
- , Zheng Lai
- & Shengyong Mao
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Article
| Open AccessFlavonoid-attracted Aeromonas sp. from the Arabidopsis root microbiome enhances plant dehydration resistance
- Danxia He
- , Sunil K. Singh
- & Huiming Zhang
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Article
| Open AccessThe novel genus, ‘Candidatus Phosphoribacter’, previously identified as Tetrasphaera, is the dominant polyphosphate accumulating lineage in EBPR wastewater treatment plants worldwide
- C. M. Singleton
- , F. Petriglieri
- & P. H. Nielsen
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Trophic flexibility of marine diplonemids - switching from osmotrophy to bacterivory
- Galina Prokopchuk
- , Tomáš Korytář
- & Julius Lukeš
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Article
| Open AccessWhole genome sequences reveal the Xanthomonas perforans population is shaped by the tomato production system
- Jeannie M. Klein-Gordon
- , Sujan Timilsina
- & Erica M. Goss
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Article
| Open AccessFunctional strain redundancy and persistent phage infection in Swiss hard cheese starter cultures
- Vincent Somerville
- , Hélène Berthoud
- & Philipp Engel
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Functional genome-centric view of the CO-driven anaerobic microbiome
- Haowen Duan
- , Pinjing He
- & Fan Lü
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Perspective
| Open AccessThe curious consistency of carbon biosignatures over billions of years of Earth-life coevolution
- Amanda K. Garcia
- , Colleen M. Cavanaugh
- & Betul Kacar
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Microbiome assembly for sulfonamide subsistence and the transfer of genetic determinants
- Yu Deng
- , Yue Huang
- & Tong Zhang
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A mycovirus modulates the endophytic and pathogenic traits of a plant associated fungus
- Lingling Zhou
- , Xuepei Li
- & Wenxing Xu
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Article |
Pantothenate mediates the coordination of whitefly and symbiont fitness
- Fei-Rong Ren
- , Xiang Sun
- & Jun-Bo Luan
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| Open AccessFunctional mutants of Azospirillum brasilense elicit beneficial physiological and metabolic responses in Zea mays contributing to increased host iron assimilation
- A. B. Housh
- , G. Powell
- & R. A. Ferrieri
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Glycogen metabolism of the anammox bacterium “Candidatus Brocadia sinica”
- Satoshi Okabe
- , Amrini Amalia Shafdar
- & Mamoru Oshiki
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Article
| Open AccessConcentration and chemical form of dietary zinc shape the porcine colon microbiome, its functional capacity and antibiotic resistance gene repertoire
- Robert Pieper
- , Temesgen H. Dadi
- & Jürgen Zentek
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Intracellular symbionts drive sex ratio in the whitefly by facilitating fertilization and provisioning of B vitamins
- Yan-Bin Wang
- , Fei-Rong Ren
- & Jun-Bo Luan
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Biotin provisioning by horizontally transferred genes from bacteria confers animal fitness benefits
- Fei-Rong Ren
- , Xiang Sun
- & Jun-Bo Luan
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Linking perturbations to temporal changes in diversity, stability, and compositions of neonatal calf gut microbiota: prediction of diarrhea
- Tao Ma
- , Clothilde Villot
- & Le Luo Guan
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The hidden chemolithoautotrophic metabolism of Geobacter sulfurreducens uncovered by adaptation to formate
- Tian Zhang
- , Xiao-Chen Shi
- & Pier-Luc Tremblay
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Article
| Open AccessHigh functional diversity among Nitrospira populations that dominate rotating biological contactor microbial communities in a municipal wastewater treatment plant
- Emilie Spasov
- , Jackson M. Tsuji
- & Josh D. Neufeld
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Identification of a parasitic symbiosis between respiratory metabolisms in the biogeochemical chlorine cycle
- Tyler P. Barnum
- , Yiwei Cheng
- & John D. Coates
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From an extremophilic community to an electroautotrophic production strain: identifying a novel Knallgas bacterium as cathodic biofilm biocatalyst
- Johannes Eberhard Reiner
- , Katharina Geiger
- & Johannes Gescher
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Syntrophus conductive pili demonstrate that common hydrogen-donating syntrophs can have a direct electron transfer option
- David J. F. Walker
- , Kelly P. Nevin
- & Derek R. Lovley
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Article
| Open AccessNovel probiotic approach to counter Paenibacillus larvae infection in honey bees
- Brendan A. Daisley
- , Andrew P. Pitek
- & Gregor Reid
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Temperature as competitive strategy determining factor in pulse-fed aerobic bioreactors
- Gerben Roelandt Stouten
- , Carmen Hogendoorn
- & Robbert Kleerebezem
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Patterns of inter- and intrasubspecific homologous recombination inform eco-evolutionary dynamics of Xylella fastidiosa
- Neha Potnis
- , Prem P. Kandel
- & Leonardo De La Fuente
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Thermal plasticity of a freshwater cnidarian holobiont: detection of trans-generational effects in asexually reproducing hosts and symbionts
- Siao Ye
- , Krishna N. Badhiwala
- & Evan Siemann
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Brief Communication
| Open AccessA modular atomic force microscopy approach reveals a large range of hydrophobic adhesion forces among bacterial members of the leaf microbiota
- Maximilian Mittelviefhaus
- , Daniel B. Müller
- & Julia A. Vorholt
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Article
| Open AccessPolyphosphate recovery by a native Bacillus cereus strain as a direct effect of glyphosate uptake
- Alejandra Guadalupe Acosta-Cortés
- , Cesar Martinez-Ledezma
- & Juan Francisco Villarreal-Chiu
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Anaerobic degradation of xenobiotic isophthalate by the fermenting bacterium Syntrophorhabdus aromaticivorans
- Madan Junghare
- , Dieter Spiteller
- & Bernhard Schink
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Modeling microbial communities from atrazine contaminated soils promotes the development of biostimulation solutions
- Xihui Xu
- , Raphy Zarecki
- & Shiri Freilich
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Article
| Open AccessFunctional metagenomics reveals abundant polysaccharide-degrading gene clusters and cellobiose utilization pathways within gut microbiota of a wood-feeding higher termite
- Ning Liu
- , Hongjie Li
- & Qian Wang
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Article
| Open AccessImpact of spatial organization on a novel auxotrophic interaction among soil microbes
- Xue Jiang
- , Christian Zerfaß
- & Orkun S Soyer
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Review Article |
Reply to the commentary “Uncultivated microbes—in need of their own nomenclature?”
- Konstantinos T Konstantinidis
- , Ramon Rosselló-Móra
- & Rudolf Amann
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Article
| Open AccessResolution of habitat-associated ecogenomic signatures in bacteriophage genomes and application to microbial source tracking
- Lesley A. Ogilvie
- , Jonathan Nzakizwanayo
- & Brian V. Jones
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Original Article
| Open AccessThe bacterium Wolbachia exploits host innate immunity to establish a symbiotic relationship with the dengue vector mosquito Aedes aegypti
- Xiaoling Pan
- , Andrew Pike
- & Zhiyong Xi
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Short Communication |
Soil protist communities form a dynamic hub in the soil microbiome
- Wu Xiong
- , Alexandre Jousset
- & Stefan Geisen
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Original Article |
Grape pomace compost harbors organohalide-respiring Dehalogenimonas species with novel reductive dehalogenase genes
- Yi Yang
- , Steven A Higgins
- & Frank E Löffler
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Perspective |
Uncultivated microbes in need of their own taxonomy
- Konstantinos T Konstantinidis
- , Ramon Rosselló-Móra
- & Rudolf Amann
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Mini Review |
Faecalibacterium prausnitzii: from microbiology to diagnostics and prognostics
- Mireia Lopez-Siles
- , Sylvia H Duncan
- & Margarita Martinez-Medina
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Original Article |
Regional synchrony in full-scale activated sludge bioreactors due to deterministic microbial community assembly
- James S Griffin
- & George F Wells
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Original Article
| Open AccessMethylacidiphilum fumariolicum SolV, a thermoacidophilic ‘Knallgas’ methanotroph with both an oxygen-sensitive and -insensitive hydrogenase
- Sepehr Mohammadi
- , Arjan Pol
- & Huub JM Op den Camp
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Short Communication |
Absolute quantification of microbial taxon abundances
- Ruben Props
- , Frederiek-Maarten Kerckhof
- & Nico Boon