Abstract
The BCL-2 family protein BCL-RAMBO, also known as BCL2-like 13, anchors at the outer mitochondrial membrane and regulates apoptosis, mitochondrial fragmentation, and mitophagy. However, the mechanisms underlying the proapoptotic role of BCL-RAMBO remain unclear. In the present study, we demonstrated that BCL-RAMBO interacted with glucose-regulated protein 75 (GRP75), also known as heat shock protein family A member 9, and mortalin using co-immunoprecipitation and glutathione S-transferase-based pull-down assays. BCL-RAMBO interacted with GRP75 via its No BCL-2 homology domain. The interaction between BCL-RAMBO and GRP75 was confirmed by genetic interactions in Drosophila because a rough eye phenotype caused by the ectopic expression of BCL-RAMBO was partially suppressed by mutations in Hsc70-5, a mammalian GRP75 ortholog. In human embryonic kidney 293T cells, the co-expression of BCL-RAMBO and GRP75 facilitated an elevation in executioner caspase activity and poly (ADP-ribose) polymerase 1 (PARP-1) cleavage. In contrast, the knockdown of GRP75 suppressed elevated executioner caspase activity and PARP-1 cleavage in BCL-RAMBO-transfected cells. The mitochondrial release of cytochrome c induced by BCL-RAMBO was also attenuated by the knockdown of GRP75. These results indicate that GRP75 interacts with BCL-RAMBO and plays a crucial role in the BCL-RAMBO-dependent apoptosis signaling pathway.
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Introduction
Apoptosis is one of the most important cell death programs and functions to maintain homeostasis by eliminating abnormal or damaged cells in higher organisms1. Dysfunctional apoptosis pathways have been linked to many human diseases, including cancer, neurodegenerative disorders, autoimmune diseases, and heart diseases2. Apoptosis is mainly divided into two categories: intrinsic and extrinsic pathways3,4. Intrinsic apoptosis, also known as mitochondria-dependent apoptosis, is generally regulated by BCL-2 family proteins, which share sequence homology within conserved regions known as the BCL-2 homology (BH) domain5,6,7. The BCL-2 family of proteins regulate mitochondrial outer membrane permeability (MOMP), which mediates the release of multiple proteins (e.g. cytochrome c) that are normally confined to the intermembrane space of mitochondria8,9,10. Upon its release into the cytosol, cytochrome c binds to apoptotic peptidase activating factor 1 and induces the formation of apoptosomes, which activate the initiator procaspase-911,12. Active caspase-9 then directly cleaves and converts executioner procaspases-3 and -7 into their active forms13,14.
BCL-RAMBO, also known as BCL2-like 13, was initially discovered as a pro-apoptotic protein15. Many studies have demonstrated that BCL-RAMBO controls cell death, mitochondria fragmentation, and mitophagy16,17. BCL-RAMBO consists of an N-terminal BH domain, a No BH (BHNo) domain, a transmembrane (TM) domain, and a short cytoplasmic tail15. In contrast to other pro-apoptotic BCL-2 family proteins, the pro-apoptotic activity of BCL-RAMBO depends on the BHNo domain and TM domain instead of the BH domain15. Previous studies demonstrated that BCL-RAMBO did not bind to anti-apoptotic and pro-apoptotic BCL-2 family proteins15,18; however, it was shown to interact with multiple mammalian proteins, adenine nucleotide translocases (ANT)19,20, ceramide synthases (CERS)21, microtubule-associated protein 1 light chain 3 (MAP1LC3)22,23, phosphoglycerate mutase 5 (PGAM5)24, unc-51-like kinase (ULK1)25, and voltage-dependent anion channels (VDAC)20, as well as the bacterial protein SidF (Legionella pneumophila)26. ANT, PGAM5, and VDAC have been reported to regulate BCL-RAMBO-mediated apoptosis19,20,24, while MAP1LC3, PGAM5, and ULK1 were shown to control BCL-RAMBO-mediated mitophagy22,24,25.
Glucose-regulated protein 75 (GRP75), also known as heat shock protein (HSP) family A member 9 or mortalin, belongs to the HSP70 family and interacts with several binding partners27,28,29. GRP75 predominantly resides in mitochondria at which it performs multiple functions, including the import of mitochondrial proteins, while it also localizes to other cellular compartments, including the endoplasmic reticulum (ER), cytoplasmic vesicles, and cytosol27,28,29. VDAC1 was previously reported to interact with GRP7530, and was subsequently shown to be linked to the ER Ca2+ channel inositol 1,4,5-triphosphate receptor (IP3R) through GRP7531. Mitochondria-associated membranes (MAMs) are contact sites between mitochondria and the ER, and exert various biological functions, including lipid metabolism and calcium signaling32,33. Accumulating evidence reveals that the IP3R-GRP75-VDAC1 complex localizes at MAMs and mediates the transfer of Ca2+ from the ER to mitochondria32,33.
We previously reported that BCL-RAMBO and VDAC cooperatively promoted caspase activity in human cultured cells20. We also demonstrated that VDAC1 interacted with BCL-RAMBO20. The mechanisms by which BCL-RAMBO and VDAC promote caspase activation remain unclear. In the present study, we attempted to test the hypothesis that GRP75 is involved in the BCL-RAMBO-dependent apoptosis signaling pathway. We initially found that BCL-RAMBO interacted with GRP75 using a co-immunoprecipitation assay. We also revealed that BCL-RAMBO interacted and cooperated with GRP75 to promote its apoptosis signaling pathway.
Results
GRP75 interacted with BCL-RAMBO via its BHNo domain
To verify the interaction between BCL-RAMBO and GRP75, we overexpressed FLAG-BCL-RAMBO and VSV-GRP75 in 293T cells by transient transfection using pCR3 expression vectors, and performed co-immunoprecipitation assays using anti-FLAG antibody-conjugated agarose beads. VSV-GRP75 was co-immunoprecipitated with FLAG-BCL-RAMBO (Fig. 1a). To confirm this, we also performed pull-down assays using the glutathione S-transferase (GST) protein and GST-BCL-RAMBO protein, both of which were produced in Escherichia coli, and cell lysates prepared from 293T cells transiently expressing FLAG-GRP75. The GST-BCL-RAMBO protein, but not the GST protein, pulled down FLAG-GRP75 (Fig. 1b). These results showed that GRP75 physically interacted with BCL-RAMBO.
BCL-RAMBO contains four N-terminal BH motifs, a BHNo domain, and a C-terminal TM domain (Fig. 1c)15. To identify the interacting regions of BCL-RAMBO and GRP75, we used a series of deletion mutants of BCL-RAMBO (Fig. 1c). FLAG-tagged BCL-RAMBO mutants and VSV-GRP75 were transiently expressed in 293T cells. BCL-RAMBO WT (1–485), BH + BHNo (1–459), and BHNo (205–459), but not BH (1–223), co-immunoprecipitated with GRP75 (Fig. 1d). These results indicated that GRP75 interacted with BCL-RAMBO via its BHNo domain.
Hsc70-5, a mammalian GRP75 ortholog, genetically interacted with BCL-RAMBO
We previously showed that the ectopic expression of BCL-RAMBO, but not BCL-RAMBO ΔTM, induced apoptosis and caused aberrant rough eye phenotypes in Drosophila18. To allow the ectopic expression of green fluorescence protein (GFP) and BCL-RAMBO in Drosophila eyes, UAS-GFP and UAS-BCL-RAMBO fly lines were crossed with glass multiple reporter (GMR)-GAL4 fly lines. The morphology of adult eyes was normal in fly lines expressing GFP (Fig. 2a–a″,f–f″). Consistent with our previous findings18, BCL-RAMBO caused a loss of pigmentation, a reduction in eye sizes, and marked morphological changes in ommatidia (Fig. 2c–c″,h–h″). Hsc70-5 is an ortholog of mammalian GRP75. The Hsc70-5 mutations, Hsc70-5k06618 and Hsc70-5k04907, partly rescued the reduction in pigmentation in BCL-RAMBO fly lines (Fig. 2d–d″,i–i″), but did not affect the morphology of adult eyes in fly lines expressing GFP (Fig. 2b–b″,g–g″) and BCL-RAMBO ΔTM (Fig. 2e–e″,j–j″). These results showed that Hsc70-5 genetically interacted with BCL-RAMBO in Drosophila.
GRP75 cooperated with BCL-RAMBO to promote the activation of executioner caspases, while GRP75 knockdown attenuated the activation of executioner caspases induced by BCL-RAMBO
BCL-RAMBO has been shown to induce apoptosis when transiently expressed in cultured cell lines15,18,19,26,34. To examine the effects of GRP75 on BCL-RAMBO-induced caspase activation, 293T cells were transiently transfected with expression vectors encoding FLAG-BCL-RAMBO and FLAG-GRP75 for 18 h. FLAG-BCL-RAMBO and FLAG-GRP75 were expressed at similar levels in 293T cells (Fig. 3a). Under these conditions, BCL-RAMBO augmented caspase-3/7 activity, while GRP75 had no effects (Fig. 3b). In contrast, GRP75 promoted the augmentation of caspase-3/7 activity induced by BCL-RAMBO (Fig. 3b).
We further investigated the activation of procaspase-7 using Western blotting. FLAG-BCL-RAMBO and FLAG-GRP75 were detected to a similar degree when expressed in 293T cells for 16 h (Fig. 3c). Consistent with caspase-3/7 activity (Fig. 3b), BCL-RAMBO, but not GRP75, augmented the cleavage of procaspase-7 into the active p20 subunit (Fig. 3c,d). GRP75 promoted the augmentation of procaspase-7 cleavage induced by BCL-RAMBO (Fig. 3c,d). These results showed that GRP75 cooperated with BCL-RAMBO to promote the activation of executioner caspases.
We investigated whether the knockdown of GRP75 attenuated the BCL-RAMBO-induced apoptosis signaling pathway. Treatment of 293T cells with siGRP75 resulted in an approximately 70% reduction in the GRP75 protein compared to siControl (Fig. 3e,f). To induce sufficient activation of executioner caspases by BCL-RAMBO itself, we used a larger amount of DNA in the transient transfection experiments. Treatment with siGRP75 reduced the BCL-RAMBO-induced increase in caspase-3/7 activity (Fig. 3g). Caspase-7 cleavage was then assessed by Western blotting. The amount of cleaved caspase-7 was augmented by BCL-RAMBO in siControl-treated 293T cells (Fig. 3h,j). The treatment of 293T cells with siGRP75 resulted in a decrease in the GRP75 protein from that with siControl by approximately 60% (Fig. 3h,i). Under these conditions, the augmentation of cleaved caspase-7 caused by BCL-RAMBO was attenuated by the siGRP75 treatment (Fig. 3h,j). These results indicated that GRP75 knockdown attenuated BCL-RAMBO-induced executioner caspase activation.
GRP75 cooperated with BCL-RAMBO to promote PARP-1 cleavage, while GRP75 knockdown attenuated BCL-RAMBO-induced PARP-1 cleavage
Poly (ADP-ribose) polymerase 1 (PARP-1) (113 kDa) is known to be one of the cellular caspase substrates, and is cleaved into 89 kDa fragments by caspase-3 and caspase-7 during apoptosis35,36. We further investigated the cleavage of PARP-1 by Western blotting. Transfection of 293T cells with BCL-RAMBO for 24 h increased PARP-1 cleavage, whereas BCL-RAMBO-induced PARP-1 cleavage was promoted by co-transfection with GRP75 (Fig. 4a,b). These results demonstrated that GRP75 cooperated with BCL-RAMBO to promote the cleavage of the caspase substrate PARP-1.
We investigated the effect of GRP75 knockdown on BCL-RAMBO-induced PARP-1 cleavage. Treatment of 293T cells with siGRP75 reduced the amount of GRP75 protein by approximately 60% (Fig. 4c,d). BCL-RAMBO-induced PARP-1 cleavage was reduced in siGRP75-treated cells (Fig. 4c,e). These results indicated that GRP75 knockdown attenuated the BCL-RAMBO-induced PARP-1 cleavage.
The knockdown of GRP75 attenuated the release of cytochrome c into the cytosol
In mitochondrial apoptosis, the release of cytochrome c into the cytosol is essential for the activation of caspases11,12. We previously showed that BCL-RAMBO induced the mitochondrial release of cytochrome c in the cytosol15,18. To evaluate the subcellular localization of cytochrome c, cell lysates were separated into cytosolic, nuclear, and organellar fractions by successive treatments with digitonin and Triton X-100, followed by centrifugation. The GRP75 protein was recovered in the organellar fraction, but not in the cytosolic fraction (Fig. 5a,b). The treatment of 293T cells with siGRP75 diminished the amount of the GRP75 protein from that with siControl by more than 80% (Fig. 5a,c). Cytochrome c levels in the organellar fraction were not markedly affected by BCL-RAMBO or siGRP75 (Fig. 5a,d). BCL-RAMBO augmented the amount of cytochrome c in the cytosolic fraction of siControl-treated cells (Fig. 5b,e). The BCL-RAMBO-induced augmentation of cytosolic cytochrome c was markedly diminished in siGRP75-treated cells (Fig. 5b,e). These results showed that the knockdown of GRP75 attenuated the BCL-RAMBO-induced release of cytochrome c into the cytosol.
BCL-RAMBO formed a complex with GRP75 and VDAC1
We showed that GRP75 interacted with BCL-RAMBO via its BHNo domain (Fig. 1d). VDAC1 has been previously reported to interact with GRP7530. To test whether the complex formed with BCL-RAMBO and GRP75 contains additional factors such as VDAC1, we transfected 293T cells with expression vectors encoding FLAG-BCL-RAMBO, together with VSV-GRP75 and VSV-VDAC1, and cell lysates were used for immunoprecipitation assay using anti-FLAG antibody beads. As shown in Fig. 1a, VSV-GRP75 was immunoprecipitated with FLAG-BCL-RAMBO (Fig. 6). In contrast, VSV-VDAC1 was barely immunoprecipitated with FLAG-BCL-RAMBO (Fig. 6). However, VSV-VDAC1 was immunoprecipitated with FLAG-BCL-RAMBO when VSV-GRP75 was co-transfected (Fig. 6). These results suggest that GRP75 mediates the interaction between BCL-RAMBO and VDAC1.
Discussion
The overexpression of BCL-RAMBO has been shown to induce apoptosis in human embryonic kidney 293T cells, human breast cancer MCF-7 cells, and human prostate cancer PC3 cells15,19,26. A previous study demonstrated that BCL-RAMBO promoted taxol-induced cell death in 293A cells and etoposide-induced cell death in human cervical cancer HeLa cells34. In Drosophila S2 cells, the ectopic expression of BCL-RAMBO induced apoptosis18. Collectively, these findings showed that BCL-RAMBO is a pro-apoptotic protein capable of inducing apoptosis in multiple cell lines. In the present study, we identified GRP75 as an emerging partner capable of interacting with BCL-RAMBO. GRP75 promoted BCL-RAMBO-induced caspase activity and PARP-1 cleavage, while its knockdown attenuated BCL-RAMBO-induced caspase activity, PARP-1 cleavage, and the mitochondrial release of cytochrome c. The present results revealed that GRP75 functions as an important regulator of the BCL-RAMBO-dependent apoptosis signaling pathway.
The present study revealed that GRP75 interacted with BCL-RAMBO. In addition to the import of mitochondrial proteins, GRP75 exerts various functions by interacting with several binding partners27,28,29. Closely related to the present study, GRP75 was shown to become a bridge between the ER channel protein IP3R and the mitochondrial channel protein VDAC131. The IP3R-GRP75-VDAC1 complex is present in MAMs and transfers Ca2+ from the ER and mitochondria37. We previously showed that the GST-BCL-RAMBO protein interacted with FLAG-VDAC1 expressed in 293T cells20. In this study, the immunoprecipitation assay showed that BCL-RAMBO formed a complex with GRP75 and VDAC1. Taken together, the present results suggest that BCL-RAMBO associates with the IP3R-GRP75-VDAC1 complex and is an additional component that regulates its biological activity.
BCL-RAMBO has been shown to mediate pro-apoptotic activity via the BHNo domain anchored at the mitochondrial outer membrane, whereas the BH domain of BCL-RAMBO is not necessarily essential for pro-apoptotic activity15. To date, BCL-RAMBO has been shown to induce MOMP in a manner that is independent of its direct interactions with other BCL-2 family proteins. In the present study, we showed that GRP75 interacted with BCL-RAMBO via its BHNo domain. BCL-RAMBO and GRP75 cooperatively promoted caspase activation and PARP-1 cleavage, while the knockdown of GRP75 attenuated the BCL-RAMBO-induced mitochondrial release of cytochrome c, caspase activation, and PARP-1 cleavage. Therefore, GRP75 appears to interact with BCL-RAMBO, thereby promoting MOMP. However, future studies are needed to elucidate the mechanism by which BCL-RAMBO and GRP 75 induce cytochrome c release from mitochondria, including the multimerization of BAX and BAK.
GRP75 has been identified as an important regulator of apoptosis, which is mediated by the IP3R-GRP75-VDAC1 complex38,39. Adriamycin and angiotensin II were found to increase the expression of IP3R, GRP75, VDAC1, and mitochondrial calcium uniporter, and thereby induced apoptosis in mouse podocytes, while the knockdown of GRP75 inhibited adriamycin- and angiotensin II-induced apoptosis38. The knockdown of GRP75 also attenuated elevated mitochondrial Ca2+ levels in retinal microvascular endothelial cells (RMECs) treated with high glucose or advanced glycosylation end products, which represent a cellular model for diabetic retinopathy39. BAPTA-AM, an intracellular calcium chelator, prevented apoptosis induced by tunicamycin, an ER stress inducer, in RMECs39. These findings indicate that GRP75 regulates mitochondrial Ca2+ levels and thereby promotes Ca2+-dependent apoptosis. Ca2+ plays an important role in the regulation of mitochondria metabolism; low Ca2+ levels are essential for maintaining the optimal rates of ATP production, while excess Ca2+ levels induce the loss of mitochondrial functions40,41. The mitochondrial influx of Ca2+ triggers apoptosis, necrosis, and autophagy40,41. Further studies are needed to confirm whether BCL-RAMBO regulates mitochondrial Ca2+-dependent processes.
In conclusion, the present results provide novel insights into the mechanisms underlying apoptotic signaling by BCL-RAMBO. To date, the physiological stimuli that induce apoptosis via BCL-RAMBO have not been well understood. Further studies are needed to link BCL-RAMBO to the IP3R-GRP75-VDAC1 complex and elucidate the role of GRP75 in BCL-RAMBO-induced apoptosis under physiological and pathological settings.
Materials and methods
Cell lines
Human embryonic kidney 293T cells (RCB2202) were provided by Cell Bank, the RIKEN BioResource Research Center (Tsukuba, Japan). 293T cells, which were used for experiments to induce apoptosis, were described in our previous studies15,42. 293T cells were maintained with Dulbecco’s Modified Eagle’s medium (Thermo Fisher Scientific, Waltham, MA, USA) supplemented with heat-inactivated fetal calf serum (Sigma-Aldrich, St. Louis, MO, USA) and penicillin–streptomycin mixed solution (Nacalai Tesque, Kyoto, Japan) at 37 °C in 5% CO2.
Fly stocks
Fly stocks were kept at 25 °C and fed food containing 0.7% agar, 10% glucose, 3% rice bran, and 4% dry yeast. The UAS-BCL-RAMBO and UAS-BCL-RAMBO ΔTM fly lines were generated in our previous study18. Fly lines carrying GMR-GAL4 were previously described43. Hsc70-5k06618/CyO (102491) fly lines were obtained from the Kyoto Stock Center, Kyoto Institute of Technology (Kyoto, Japan). The Hsc70-5k04907/CyO (10557) and UAS-GFP (9331) fly lines were obtained from the Bloomington Drosophila Stock Center, Indiana University (Bloomington, IN, USA).
Plasmids
pCR3 expression vectors encoding FLAG-tagged wild-type human BCL-RAMBO (1–485) (GeneBank accession: AF325209), BCL-RAMBO (1–459), BCL-RAMBO (1–223), BCL-RAMBO (205–459), and pGEX-6-P1 expression vectors encoding human BCL-RAMBO were previously described15,24. A plasmid encoding human GRP75 cDNA (clone: HEP01066; GenBank accession: AK222758) was a kind gift from Sumio Sugano and Akiko Tanaka. Full-length GRP75 (1–679) was subcloned into pCR3 expression vectors encoding an N-terminal FLAG-tag and VSV-tag.
Antibodies
Mouse monoclonal antibodies to FLAG (IE6; FUJIFILM Wako Pure Chemical Corporation, Osaka, Japan), VSV-G (P5D4; Santa Cruz Biotechnology, Dallas, TX, USA), the VSV glycoprotein (P5D4, SAB4200695; Sigma-Aldrich), GRP75 (D-9; Santa Cruz Biotechnology), cytochrome c (7H8.2C12; BD Biosciences, Franklin Lakes, NJ, USA), PARP-1 (C2-10; R &D Systems, Minneapolis, MN, USA), γ1-actin (2F3; FUJIFILM Wako Pure Chemical Corporation), β-actin (AC-15; Sigma-Aldrich), and GAPDH (6C5; Santa Cruz Biotechnology), a rat monoclonal antibody to caspase-7 (11E4; Sigma-Aldrich), and a rabbit polyclonal antibody to HSP60 (insect, ADI-SPA-805; Enzo Life Sciences, Farmingdale, NY, USA) were used as primary antibodies. Peroxidase-conjugated goat anti-mouse IgG (H + L) (115-035-146; Jackson ImmunoResearch Laboratories, West Grove, PA, USA), goat anti-rabbit IgG (H + L) (111-035-144; Jackson ImmunoResearch Laboratories), and goat anti-rat IgG (H + L) (J112-035-143; Jackson ImmunoResearch Laboratories) were used as secondary antibodies.
Microscopic observations
GMR-GAL4 driver fly lines were crossed with the UAS fly lines. Fly lines were then crossed with Hsc70-5 mutant fly lines. The compound eyes of adult flies were observed using the stereomicroscope SZX10 (Olympus, Tokyo, Japan) and scanning electron microscope VE-7800 (Keyence, Osaka, Japan).
Knockdown by siRNA
Predesigned siRNA for GRP75 (SASI_Hs01_00216923; Sigma-Aldrich) and MISSION® siRNA Universal Negative Control #1 (SIC001; Sigma-Aldrich) were used for knockdown experiments. 293T cells were transfected with siControl or siGRP75 (each 30 nM) by Lipofectamine™ RNAiMAX (Thermo Fisher Scientific) and then incubated for 24 h. 293T cells were transfected with the pCR3 expression vector encoding FLAG-BCL-RAMBO by HilyMax transfection reagent (Dojindo, Kumamoto, Japan) and further incubated for 16 h or 24 h.
Immunoprecipitation
293T cells were transfected with pCR3 expression vectors encoding FLAG-tagged and VSV-tagged target genes using the calcium phosphate method and then incubated for 18 h. 293T cells were washed with ice-cold phosphate-buffered saline (PBS) and lysed with Nonidet P-40 lysis buffer (0.2% NP-40, 150 mM NaCl, 20 mM Tris–HCl (pH 7.4), 10% glycerol, and 2 mM sodium vanadate) containing protease inhibitor cocktail cOmplete™ (Sigma-Aldrich). After centrifugation (15,300×g, 5 min), postnuclear cell lysates were collected as supernatants and incubated with Sepharose 4B beads (Sigma-Aldrich) at 4 °C for 1 h. The precleared supernatants were then incubated with anti-FLAG M2 affinity agarose beads (Sigma-Aldrich) at 4 °C for 3 h. Anti-FLAG M2 agarose beads were collected, and then washed at least five times with NP-40 lysis buffer. Immunoprecipitates and precleared cell lysates were separated by SDS-PAGE and analyzed by Western blotting.
Pull-down assay
The GST protein and GST-BCL-RAMBO protein were prepared by E. coli BL21 (DE3) as previously described20. 293T cells were transfected with the pCR3 expression vector encoding FLAG-GRP75 using the calcium phosphate method and incubated for 18 h. 293T cells were washed with ice-cold PBS and then lysed with Nonidet P-40 lysis buffer, followed by centrifugation (15,300×g, 5 min) to collect supernatants as cell lysates. The GST protein or GST-BCL-RAMBO protein (25 µg each) was incubated with cell lysates (500 µg of proteins) and Glutathione Sepharose® 4B beads at 4 °C overnight. Glutathione Sepharose® 4B beads were washed at least five times with NP-40 wash buffer. Pull-down fractions and cell lysates were separated by SDS-PAGE and analyzed by Western blotting. Ponceau S staining was used to detect the GST protein and GST-BCL-RAMBO protein.
Western blotting
Cell lysates were prepared as described elsewhere in this report. Whole cell lysates were prepared as previously described44. The amount of proteins in cell lysates was measured by CBB solution for Protein Assays (Nacalai Tesque). An equal amount of cell lysates was separated by SDS-PAGE. Gels were transferred to 0.22-µm ClearTrans® nitrocellulose membranes (FUJIFILM Wako Pure Chemical Corporation). After blocking with 5% skim milk in 0.5% Tween 20–PBS (PBS-T) overnight, membranes were treated with primary antibodies in 5% skim milk–PBS-T for 1 h and washed with PBS-T. The membranes were further incubated with secondary antibodies in 5% skim milk–PBS-T for 1 h and then washed with PBS-T. Protein bands were visualized using Amersham™ ECL Western Blotting Detection Reagents (Cytiva, Tokyo, Japan) or ImmunoStar® Zeta (FUJIFILM Wako Pure Chemical Corporation), acquired by Amersham™ Imager 680 (GE Healthcare Japan, Tokyo, Japan) and analyzed by ImageQuant™ TL software version 7.0 (GE Healthcare Japan).
Caspase assay
293T cells were transiently transfected with pCR3 expression vectors encoding FLAG-tagged target genes together with the pCR3 expression vector encoding cytomegalovirus promoter-driven Renilla luciferase to measure transfection efficiencies. After an incubation for 16 h or 18 h, 293T cells were washed with ice-cold PBS and lyzed with digitonin lysis buffer (10 mM Hepes–KOH (pH7.2), 0.1 mM digitonin, 250 mM sucrose, 50 mM NaCl, 2 mM MgCl2, 5 mM EGTA, and 1 mM dithiothreitol). Cell lysates were collected as supernatants after centrifugation (15,300×g, 5 min). Cell lysates were used to evaluate aminoluciferin-dependent luciferase activity by the Caspase-Glo® 3/7 Assay System (Promega, Madison, WI, USA) and coelenterazine-dependent Renilla luciferase activity by a previously reported method45. Relative light units were measured by Lumitester C-110 (Kikkoman Biochemifa, Tokyo, Japan). Renilla luciferase activity was used to normalize caspase-3/7 activity.
Subcellular fractionation
293T cells were transiently transfected with siRNAs and pCR3 expression vectors. Transfected cells were washed with ice-cold PBS and then lysed with digitonin lysis buffer containing the protease inhibitor cocktail cOmplete™ on ice for 15 min. Cell lysates were centrifuged (15,300×g, 5 min) and then separated into supernatants (cytosolic fraction) and precipitates. Precipitates were washed at least three times with digitonin lysis buffer and then lysed with Triton X-100 lysis buffer containing cOmplete™ on ice for 15 min. Cell lysates were centrifuged (15,300×g, 5 min) and separated into supernatants (organellar fraction) and precipitates (nuclear fraction). Cytosolic and organellar fractions were separated by SDS-PAGE and subsequently analyzed by Western blotting. These methods were used to evaluate cytochrome c release in human leukemia Jurkat cells and Drosophila S2 cells18,46.
Data analysis
Data are presented as the means ± standard error (S.E.). Data analyses were performed by a one-way ANOVA and Tukey’s post-hoc test for multiple comparisons using the KaleidaGraph software version 4.5.1 (Hulinks, Tokyo, Japan).
Data availability
All raw data used in the present study are available upon request from the corresponding author.
References
Fuchs, Y. & Steller, H. Programmed cell death in animal development and diseases. Cell 147, 742–758 (2011).
Favaloro, B., Allocati, N., Graziano, V., Di Ilio, C. & De Laurenzi, V. Role of apoptosis in disease. Aging 4, 330–349. https://doi.org/10.18632/aging.100459 (2012).
D’Arcy, M. S. Cell death: A review of the major forms of apoptosis, necrosis and autophagy. Cell Biol. Int. 43, 582–592 (2019).
Tang, D., Kang, R., Berghe, T. V., Vandenabeele, P. & Kroemer, G. The molecular machinery of regulated cell death. Cell Res. 29, 347–364 (2019).
Adams, J. M. & Cory, S. The BCL-2 arbiters of apoptosis and their growing role as cancer targets. Cell Death Differ. 25, 27–36 (2018).
Singh, R., Letai, A. & Sarosiek, K. Regulation of apoptosis in health and disease: The balancing act of BCL-2 family proteins. Nat. Rev. Mol. Cell Biol. 20, 175–193 (2019).
Warren, C. F., Wong-Brown, M. W. & Bowden, N. BCL-2 family isoforms in apoptosis and cancer. Cell Death Dis. 10, 177. https://doi.org/10.1038/s41419-019-1407-6 (2019).
Kale, J., Osterlund, E. J. & Andrews, D. W. BCL-2 family proteins: Changing partners in the dance towards death. Cell Death Differ. 25, 65–80 (2018).
Kalkavan, H. & Green, D. R. MOMP, cell suicide as a BCL-2 family business. Cell Death Differ. 25, 46–55 (2018).
Bock, F. J. & Taito, S. W. G. Mitochondrial as multifaceted regulators of cell death. Nat. Rev. Mol. Cell Biol. 21, 85–100 (2020).
Bratton, S. B. & Salvesen, G. S. Regulation of the Apaf-1–caspase-9 apoptosome. J. Cell Sci. 123, 3209–3214 (2010).
Yuan, S. & Akey, C. W. Apoptosome structure, assembly, and procaspase activation. Structure 21, 501–515 (2013).
Mcllwain, D. R., Berger, T. & Mak, T. W. Caspase functions in cell death and disease. Cold Spring Harb. Perspect. Biol. 5, a008656. https://doi.org/10.1101/cshperspect.a008656 (2013).
Man, S. M. & Kanneganti, T. D. Converging roles of caspases in inflammasome activation, cell death and innate immunity. Nat. Rev. Immunol. 16, 7–21 (2016).
Kataoka, T. et al. Bcl-rambo, a novel Bcl-2 homologue that induces apoptosis via its unique C-terminal extension. J. Biol. Chem. 276, 19548–19554 (2001).
Meng, F. et al. BCL2L13: Physiological and pathological meanings. Cell. Mol. Life Sci. 78, 2419–2428 (2021).
Kataoka, T. Biological properties of the BCL-2 family protein BCL-RAMBO, which regulates apoptosis, mitochondrial fragmentation, and mitophagy. Front. Cell Dev. Biol. 10, 1065702. https://doi.org/10.3389/fcell.2022.1065702 (2022).
Nakazawa, M. et al. The human Bcl-2 family member Bcl-rambo localizes to mitochondria and induces apoptosis and morphological aberrations in Drosophila. PLoS ONE 11, e0157823. https://doi.org/10.1371/journal.pone.0157823 (2016).
Kim, J. Y., So, K. J., Lee, S. & Park, J. H. Bcl-rambo induces apoptosis via interaction with the adenine nucleotide translocator. FEBS Lett. 586, 3142–3149 (2012).
Matsubara, H. et al. The human Bcl-2 family member Bcl-rambo and voltage-dependent anion channels manifest a genetic interaction in Drosophila and cooperatively promote the activation of effector caspases in human cultured cells. Exp. Cell Res. 381, 223–234 (2019).
Jensen, S. A. et al. Bcl2L13 is a ceramide synthase inhibitor in glioblastoma. Proc. Natl. Acad. Sci. U.S.A. 111, 5682–5687 (2014).
Murakawa, T. et al. Bcl-2-like protein 13 is a mammalian Atg32 homologue that mediates mitophagy and mitochondrial fragmentation. Nat. Commun. 6, 7525. https://doi.org/10.1038/ncomms8527 (2015).
Li, M., Jia, J., Zhang, X. & Dai, H. Selective binding of mitophagy receptor protein Bcl-rambo to LC3/GABARAP family proteins. Biochem. Biophys. Res. Commun. 530, 292–300 (2020).
Hashino, T. et al. PGAM5 interacts with Bcl-rambo and regulates apoptosis and mitophagy. Exp. Cell Res. 420, 113342 (2022).
Murakawa, T. et al. A mammalian mitophagy receptor, Bcl2-L-13, recruits the ULK1 complex to induce mitophagy. Cell Rep. 26, 338–345 (2019).
Banga, S. et al. Legionella pneumophila inhibits macrophage apoptosis by targeting pro-death members of the Bcl2 protein family. Proc. Natl. Acad. Sci. U.S.A. 104, 5121–5126 (2007).
Londono, C., Osorio, C., Gama, V. & Alzate, O. Mortalin, apoptosis and neurodegeneration. Biomolecules 2, 143–164. https://doi.org/10.3390/biom2010143 (2012).
Flachbartová, Z. & Kovacech, B. Mortalin—A multipotent chaperon regulating cellular processes ranging from viral infection to neurodegeneration. Acta Virol. 57, 3–15 (2013).
Esfahanian, N., Knoblich, C. D., Bowman, G. A. & Rezvani, K. Mortalin: Protein partner, biological impact, pathological roles, and therapeutic opportunities. Front. Cell Dev. Biol. 11, 1028519. https://doi.org/10.3389/fcell.2023.1028519 (2023).
Schwarzer, C., Barnikol-Watanabe, S., Thinnes, F. P. & Hilschmann, N. Voltage-dependent anion-selective channel (VDAC) interacts with the dynein light chain Tctex1 and the heat-shock protein PBP74. Int. J. Biochem. Cell Biol. 34, 1059–1070 (2002).
Szabadkai, G. et al. Chaperone-mediated coupling of endoplasmic reticulum and mitochondrial Ca2+ channels. J. Cell Biol. 175, 901–911 (2006).
Patergnani, S. et al. Calcium signaling around mitochondrial associated membranes (MAMs). Cell Commun. Signal 9, 19. https://doi.org/10.1186/1478-811X-9-19 (2011).
Raturi, A. & Simmen, T. Where the endoplasmic reticulum and the mitochondrion tie the knot: The mitochondria-associated membrane (MAM). Biochim. Biophys. Acta 1833, 213–224 (2013).
Yi, P. et al. Bcl-rambo beta, a special splicing variant with an insertion of an Alu-like cassette, promotes etoposide- and Taxol-induced cell death. FEBS Lett. 534, 6168 (2002).
Soldani, C. & Scovassi, A. I. Poly(ADP-ribose) polymerase-1 cleavage during apoptosis: An update. Apoptosis 7, 321–328 (2002).
Chaitanya, G. V., Alexander, J. S. & Babu, P. P. PARP-1 cleavage fragments: Signatures of cell-death proteases in neurodegeneration. Cell Commun. Signal. 8, 31. https://doi.org/10.1186/1478-811X-8-31 (2010).
Xu, H. X., Cui, S. M., Zhang, Y. M. & Ren, J. Mitochondrial Ca2+ regulation in the etiology of heart failure: Physiological and pathophysiological implication. Acta Pharmacol. Sin. 41, 1301–1309 (2020).
Xu, H. et al. IP3R-Grp75-VDAC1-MCU calcium regulation axis antagonists protect podocytes from apoptosis and decrease proteinuria in an Adriamycin nephropathy rat model. BMC Nephrol. 19, 140. https://doi.org/10.1186/s12882-018-0940-3 (2018).
Li, Y. et al. GRP75 modulates endoplasmic reticulum–mitochondria coupling and accelerates Ca2+-dependent endothelial cell apoptosis in diabetic retinopathy. Biomolecules 12, 1778. https://doi.org/10.3390/biom12121778 (2022).
Giorgi, C., Marchi, S. & Pinton, P. The machineries, regulation and cellular functions of mitochondrial calcium. Nat. Rev. Mol. Cell Biol. 19, 713–730 (2018).
Rossi, A., Pizzo, P. & Filadi, R. Calcium, mitochondria and cell metabolism: A functional triangle in bioenergetics. Biochim. Biophys. Acta Mol. Cell Res. 1866, 1068–1078 (2019).
Kataoka, T. & Tschopp, J. N-terminal fragment of c-FLIP(L) processed by caspase 8 specifically interacts with TRAF2 and induces activation of the NF-κB signaling pathway. Mol. Cell Biol. 24, 2627–2636 (2004).
Takahashi, Y., Hirose, F., Matsukage, A. & Yamaguchi, M. Identification of three conserved regions in the DREF transcription factors from Drosophila melanogaster and Drosophila virilis. Nucleic Acids Res. 27, 510–516 (1999).
Kondo, T. et al. 4-O-methylascochlorin inhibits the prolyl hydroxylation of hypoxia-inducible factor-1α, which is attenuated by ascorbate. J. Antibiot. 72, 271–281 (2019).
Matsuda, I. et al. The C-terminal domain of the long form of cellular FLICE-inhibitory protein (c-FLIPL) inhibits the interaction of the caspase 8 prodomain with the receptor-interacting protein 1 (RIP1) death domain and regulates caspase 8-dependent nuclear factor κB (NF-κB) activation. J. Biol. Chem. 289, 3876–3887 (2014).
Kadohara, K. et al. Caspase-8 mediates mitochondrial release of pro-apoptotic proteins in a manner independent of its proteolytic activity in apoptosis induced by the protein synthesis inhibitor acetoxycycloheximide in human leukemia Jurkat cells. J. Biol. Chem. 284, 5478–5487 (2009).
Acknowledgements
We thank Sumio Sugano and Akiko Tanaka for their kind gift. We are grateful to Yuri Kitamura for the initial contribution to this study.
Funding
This study was partly supported by the Japan Society for the Promotion of Science (JSPS) KAKENHI Grant Number 19H02885.
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J.X., T.H., and R.T. performed experiments and analyzed the results. J.X. and T.K. wrote the manuscript and prepared all figures. J.X., K.K., H.Y., and T.K. designed the study. T.K. supervised the study.
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Xu, J., Hashino, T., Tanaka, R. et al. The BCL-2 family protein BCL-RAMBO interacts and cooperates with GRP75 to promote its apoptosis signaling pathway. Sci Rep 13, 14041 (2023). https://doi.org/10.1038/s41598-023-41196-0
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DOI: https://doi.org/10.1038/s41598-023-41196-0
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