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Mitopherogenesis, a form of mitochondria-specific ectocytosis, regulates sperm mitochondrial quantity and fertility

Abstract

Mitochondrial export into the extracellular space is emerging as a fundamental cellular process implicated in diverse physiological activities. Although a few studies have shed light on the process of discarding damaged mitochondria, how mitochondria are exported and the functions of mitochondrial release remain largely unclear. Here we describe mitopherogenesis, a formerly unknown process that specifically secretes mitochondria through a unique extracellular vesicle termed a ‘mitopher’. We observed that during sperm development in male Caenorhabditis elegans, healthy mitochondria are exported out of the spermatids through mitopherogenesis and each of the generated mitophers harbours only one mitochondrion. In mitopherogenesis, the plasma membrane first forms mitochondrion-embedding outward buds, which then promptly bud off and thereby result in the generation of mitophers. Mechanistically, extracellular protease signalling in the testis triggers mitopher formation from spermatids, which is partially mediated by the tyrosine kinase SPE-8. Moreover, mitopherogenesis requires normal microfilament dynamics, whereas myosin VI antagonizes mitopher generation. Strikingly, our three-dimensional electron microscopy analyses indicate that mitochondrial quantity requires precise modulation during sperm development, which is critically mediated by mitopherogenesis. Inhibition of mitopherogenesis causes accumulation of mitochondria in sperm, which may lead to sperm motility and fertility defects. Our findings identify mitopherogenesis as a previously undescribed process for mitochondria-specific ectocytosis, which may represent a fundamental branch of mechanisms underlying mitochondrial quantity control to regulate cell functions during development.

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Fig. 1: Spermatids generate mitophers to export mitochondria into the extracellular space.
Fig. 2: Illustration of the dynamics of mitopherogenesis.
Fig. 3: Extracellular protease signalling triggers mitopherogenesis during sperm development, which is partially dependent on SPE-8.
Fig. 4: The motor protein myosin VI negatively regulates mitopherogenesis, whereas actin filaments are required for mitopher generation.
Fig. 5: Mitopherogenesis exports healthy mitochondria.
Fig. 6: Mitopherogenesis critically modulates mitochondrial quantity and fertility of sperm.

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Data availability

Source data are provided with this paper. All other data supporting the findings of this study can be obtained from the corresponding authors on reasonable request.

Code availability

The code used for acquiring ODT images in this study can be found at https://github.com/dashandong/ODTDemo.

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Acknowledgements

We thank the Caenorhabditis Genetics Center for strains; L. Miao (Institute of Biophysics, Chinese Academy of Sciences) and X. Wang (Institute of Biophysics, Chinese Academy of Sciences) for providing strains and reagents; the Microscopy Core and the Flow Cytometry Core facilities in Westlake University as well as the High-performance Computing Platform of Peking University for support; Z. Yu, Y. Zhang, Y. Wang, G. Fang, Y. Gao, F. Xiao and X. Ding for technical support; Y. Sun (Ultra-Pathology Research Office of Beijing Institute of Neurosurgery) for help with the TEM analysis of microfilaments; M. Jiang, L. Miao, C. Yang, X. Wang, Q. Chen, M. Han and D. Li for comments and editing; and all of the members of the Tang laboratories for comments and suggestions. H.T. was funded by the National Key Research and Development Program of China (grant number 2019YFA0802900), National Natural Science Foundation of China (grant numbers 32070565 and 31871465), HRHI programme (grant numbers 202109007 and 202209003) of Westlake Laboratory of Life Sciences and the Westlake Education Foundation. X.H. was funded by the National Science and Technology Major Project Program (grant numbers 2021YFA1100201 and 2022YFF0712503), the National Natural Science Foundation of China (grant numbers 32170691 and 92150301), the Lingang Laboratory (grant number LG-QS-202206-06), the Beijing Nova Program (grant number 20220484033), Clinical Medicine Plus X-Young Scholars Project of Peking University, the Fundamental Research Funds for the Central Universities and the High-performance Computing Platform of Peking University.

Author information

Authors and Affiliations

Authors

Contributions

H.T. and P.L. conceptualized the study. P.L., J.S. and D.S. conceived, designed and performed most of the experiments as well as analysed the data. H.T., P.L., J.S. and D.S. wrote the paper, with input from all authors. X.H., P.L., J.S., W.L. and J.G. performed the ODT imaging and analyses, and D.D. developed the code for the ODT data acquisition. L.G. provided technical support for the EM experiments with worms. S.W., Y.F. and X.W. performed part of the experiments for the mitopher FACS analyses. H.T. supervised the study.

Corresponding authors

Correspondence to Xiaoshuai Huang or Hongyun Tang.

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Extended data

Extended Data Fig. 1 Workflow for SBF-SEM analysis and 3D reconstruction.

(a) Worms were frozen with a high-pressure freezing machine (Leica EM ICE) and then freeze-substituted in a Leica EM AFS2 system using osmium-thiocarbohydrazide-osmium (OTO). After positioning the targeted worms with a Versa 510 X-Ray microscope (XRM-510, Zeiss), the samples were trimmed and mounted on SBF-SEM pin. The specimens were sputter coated with gold-palladium and imaged using a Gemini scanning electron microscope (Zeiss) equipped with a 3View2XP and OnPoint backscatter detector (Gatan). (b) Serial SBF-SEM images were segmented using Amira software to reconstruct 3D models of plasma membrane (blue), mitochondria (green), MOs (orange) and nucleus (yellow) of spermatids and mitophers (bright blue). (c-e) The SBF-SEM images and bar graph revealing that individual mitophers contain a single mitochondrion. The EM image displayed in (c) denotes four boxed regions, indicating the locations with mitophers. An enlargement of the boxed region in (c) is presented in (d), which depicts three mitophers located in the extracellular space of spermatids in the male germline, and only one single mitochondrion was observed in each of these three mitophers (d). The mitochondrial number of each mitopher was evaluated through 3D reconstruction of the EM images, and a total of 311 mitophers from three males were quantified (e). For all of these mitophers, each of them carries only one single mitochondrion (e). Source numerical data in (e) are available in source data.

Source data

Extended Data Fig. 2 Fluorescent signals indicate the mitochondrial, plasma membrane, MOs and nucleus appearance under ODT imaging.

(a-i) The 3D microscopic images presenting three different angles of the spermatid displayed in Fig. 2a(i)-(vi) (0.00 s). The images in (d-f) and (g-i) were obtained by rotating images in (a-c) 40-degrees clockwise and 184-degrees counterclockwise along the y-axis, respectively. The spermatids were marked by GFP::CATP-4 (green, plasma membrane) and MTDR (yellow, mitochondria). The rose dashed lines distinguish two separate spermatids. These images indicate that there were no extracellular structures nearby the spermatids before mitopherogenesis (0.00 s). (j-l) Images showing colocalization of MTDR (red) with the large, round, bright dots (white) under ODT imaging mode. The yellow arrows indicate several typical mitochondria. (m-o) Images demonstrating the colocalization of the nucleus-located spe-11p::mCherry::histone with the largest, round, and bright-white dots (in the center of the cell) observed in ODT images. Red arrow, nucleus. (p-r) Images displaying the cell shape of the spermatid captured by ODT imaging mode. The overall white signals within the spermatids detected by ODT imaging (q) depict the cell border, as demonstrated by the localization of GFP::CATP-4 (p). PM, plasma membrane. (s-u) Images showing that GFP::CATP-4-marked MOs colocalize with the lighter white signals in the spermatozoon head (u). After sperm activation, the GFP::CATP-4 signals localizes to the fused MOs as previously described20. Yellow arrow, mitochondria; blue dashed lines, cell border; green arrow, MOs in focal plane; purple arrow, MOs off the focal plane. (v) A representative TEM image of a spermatozoon. Yellow arrow, mitochondria; red arrow, nucleus; blue dashed lines, cell border; green arrow, MOs in focal plane; purple arrow, MOs off the focal plane. (w,x) Images of the spermatid corresponding to Fig. 2f at Z-12 focal plane indicating that the budding mitopher and the cell body remain connected at 277.2 s (w) and 278.4 s (x). The yellow box highlights the region where the budding mitopher (blue arrow) connects with the spermatid, and the enlarged images are shown in the bottom left corner. Scale bar, 500 nm (inset). Three biologically independent experiments were performed in (ju).

Extended Data Fig. 3 3D-EM analysis of ratio of mitopher/spermatid in the male testis.

Bar graph showing the ratio of testis mitophers to the spermatids calculated from the 3D-EM analysis. Approximately 1,000 consecutive EM slices of the spermatid region of male germline arms were reconstructed to analyse the quantity of the mitophers and spermatids. The average ratio of mitopher/spermatid is around 1.36. n = 3 biologically independent samples. Source numerical data are available in source data.

Source data

Extended Data Fig. 4 Identification and quantitative analyses of in vivo-generated mitophers by FACS.

(a–k) FACS analyses, TEM images and microscopic analyses showing the identification of mitophers according to the combination of three features: diameter, presence of the interior mitochondrion, and externalized phosphatidylserine (PS) on the mitopher membrane. (a) Shows the procedures for dissecting worms. (bd,h) Show the gating strategies. The forward scatter signals (FSC) from the reference microspheres (Beads, 0.45 μm, 0.5 μm, 1 μm, 2 μm, 3 μm) were used to estimate the size range of samples (b) and according to the size, the sample was gated into four groups (c). Annexin V with Alexa Fluor 647 was used to label the externalized PS, and MTG was used to label mitochondria. A representative TEM image (e) and the corresponding bar graph (f) indicated that structures from R2-Q2 region in (d) were all mitophers (n = 21). Confocal images indicate that the mitophers displayed Annexin V signals on the surface and interior MTG signals (g). The structures from the R1-Q3 region were all spermatids, confirmed by TEM analysis (i,j) and the DIC microscopy analyses (k). (l,m) Bar graph and representative image showing that approximately 290 sperm per male (n = 8 biologically independent experiments) and 295 sperm per male (n = 14 biologically independent worms) were detected by FACS and microscopic imaging, respectively. Each dot represents the spermatids number in one male worm. (n) Bar graph showing the total number of mitophers per male in a day-1 adult N2 male. Each dot represents the average mitopher number per male in one experiment. (o) Bar graph indicating the number of extracellular mitophers normalized to the number of spermatids in N2 males. n = 40,000 spermatids were analysed. Each dot represents the average number of mitophers normalized to one spermatid in one independent experiment. The number of biologically independent experiments is 3 in (ak), 6 in (n), 8 in (o). Source numerical data (f,j,l,n,o) are available in source data.

Source data

Extended Data Fig. 5 Role of SPE-8-group genes in mitopherogenesis.

(a) A graph showing that sperm-specific expression of SPE-8 reverses the reduction in mitophers number in the spe-8(lf). Is[spe-11p::SPE-8];spe-8(lf) males show increased mitophers generation relative to the spe-8(lf) mutant males. Promoter of spe-11 drives the expression of the transgene specifically in the sperm. n = 30,000 spermatids were analysed. (b,c) Bar graphs showing that spe-27(lf);spe-29(lf) and spe-29(lf) mutations exhibit no obvious effect on number of in vivo mitopher in the male testis. n = 15,000 spermatids in (b) and n = 30,000 spermatids in (c) were analysed. The number of biologically independent experiments is 6 in (a,c), 3 in (b). Source numerical data are available in source data.

Source data

Extended Data Fig. 6 Procedure of analysing effects of chemicals on mitopherogenesis and quantification of microfilaments diameter in C. elegans spermatids.

(a) Schematic depiction of FACS-based methods for analysing effect of chemicals on mitophers generation in the isolated spermatids. The detailed methods are described in Methods. Created with BioRender.com. (b) Graph showing the diameter of microfilaments (approximately 7 nm) in spermatids, which is consistent with the typical size of actin filaments in other cell types. Calculated from TEM images of 10 spermatids (Fig. 4r,s) by Fiji software. Each dot represents the diameter of one microfilament and n = 98 microfilaments were analysed. (c) A graph showing that inhibiting actin polymerization represses mitopherogenesis. CK-636 was used to treat spermatids isolated from the male germline, followed by treatment with/without pronase. n = 25,000 spermatids each group were analysed from 5 biologically independent experiments. Source numerical data are available in source data.

Source data

Extended Data Fig. 7 Roles of MMP and ROS in mitopherogenesis.

(ac) Microscopic images and corresponding bar graph showing that N2 spermatids treated with FCCP can still be activated to form mature spermatozoa in the presence of pronase (a,b). The activation rate of the sperm from the solvent control and the FCCP treatment group are 100% and 99%, respectively (c). This result supports the notion that the inhibition of mitopherogenesis by FCCP shown in Fig. 5c is not a result of reduced spermatid viability. Each dot represents the percentage of mature spermatozoa in one experiment. 200 cells from 3 biologically independent experiments were analysed. Green arrow, spermatozoa. (d) Box-and-whisker graph indicating that antioxidants treatment showed no effect on basal level of mitopherogenesis and pronase-induced mitopherogenesis. The antioxidants, tempol that scavenges superoxide anion O2− and acetylcysteine (NAC), mainly scavenging hydrogen peroxide H2O2 and hydroxyl radical OH, were used to reduce ROS levels in the isolated spermatids, followed by treatment with/without pronase. The number of mitophers were analysed by FACS. n = 25,000 spermatids per group from 5 biologically independent experiments were analysed. Source numerical data (c,d) are available in source data.

Source data

Extended Data Fig. 8 Procedure for analysing mitophers number released by newly-generated spermatids.

(a) Schematic diagrams showing the procedure to analyse the capacity of a spermatid generating mitophers. Briefly, the spermatocytes were released by dissecting the gonad arm and micromanipulation were carried out to collect the spermatocytes with budding spermatids, which were then differentiated in vitro to obtain the newly-formed spermatids as previously described33. Pronase was added to trigger mitopherogenesis and the resulted generation of mitophers from these newly-generated spermatids were analysed by FACS. Similar number of matured spermatozoa were also collected and the released mitophers from these spermatozoa were calculated as the negative control. The quantity of mitophers normalized to one spermatid is used to show the capacity of a spermatid to release mitophers. Created with BioRender.com. (b) Representative images showing the budding spermatids collected by micromanipulation and the newly-generated spermatids in vitro differentiated from these isolated budding spermatids. The newly-generated spermatids used for analysing mitopher-generation capacity were pretested with sperm-activation assay to indicate the normal activity of these spermatids. RB, residual body.

Extended Data Fig. 9 Sperm activation and fertility analyses in spe-8(lf) males.

(ad) Microscopic images showing that when cultured at 25 °C, spermatids from spe-8(lf) males can be activated in the presence of pronase. When grown at 20 °C, spe-8(lf) spermatids treated with pronase exhibit spikes and therefore fail to be activated (b), in accordance with previous findings16,37. In contrast, the spermatids from spe-8(lf) male grown at 25 °C can be activated to form normal pseudopodia in the presence of pronase (d), as that observed in the N2 wild-type positive control (a,c). The blue arrow indicates the pseudopodia and the white arrow indicates the spikes. (e) The bar graph showing that there is no significant difference in the length of pseudopodia between the motile spe-8(lf) sperm and non-motile spe-8(lf) sperm. Each dot represents the length of one pseudopod. 176 sperm with poor motility and 181 sperm with normal motility were analysed. (fi) Microscopic images indicating that the sperm derived from spe-8(lf) males display increased distribution in the uterus by the vulva of fog-3(lf) females after mating. Sperm in one of the spermatheca and the uterus of fog-3(lf) females mated with males with indicated genotypes cultured at 25 °C were imaged. DAPI staining was exploited to indicate the sperm. The statistical data were shown in Fig. 6r. (j) Bar graph showing that spe-8(lf) and wild-type males produce similar number of sperm. n value is labelled on the column. Three biologically independent experiments were performed. Source numerical data (e,j) are available in source data.

Source data

Extended Data Fig. 10 A proposed model for the generation of mitophers in C. elegans spermatids.

During sperm development in male C. elegans, spermatids generate mitophers through plasma outward budding to export healthy mitochondria into the extracellular space to reduce mitochondrial quantity. During mitopherogenesis, the mitopher is released immediately upon the formation of the bud that contains one mitochondrion. The mitopher is a membrane-bound vesicle sized around 490–1,100 nm that is featured by its cargo, only one single mitochondrion, and the biogenesis via quick plasma membrane budding-off. In the testis, the extracellular protease signal triggers mitopherogenesis partially through SPE-8. Moreover, normal microfilaments dynamics are required for generating mitophers, and myosin VI negatively regulate mitopher generation. Mitopherogenesis represents a previously-unknown process to specifically export mitochondria out of cells, which is critical for modulating sperm mitochondrial quantity that may be important for producing motile male gametes. Created with BioRender.com.

Supplementary information

Reporting Summary

Peer Review File

Supplementary Table 1

Supplementary Table 1. Comparison of mitophers to other characterized EVs that carry organelles. Supplementary Table 2. Worm strain list.

Supplementary Video 1

3D-EM reconstruction showing two released mitophers in the extracellular space and one spermatid that is connected to four budding mitophers (related to Fig. 1). Reconstruction and 3D view of the plasma membrane (blue), mitochondria (green), membranous organelles (orange) and nucleus (yellow) of a spermatid and mitophers (bright blue). The 3D reconstruction shows that a mitopher harbours only one mitochondrion and the mitopher membrane is from the outward-budding plasma membrane of spermatids. Moreover, multiple mitophers can be generated by a spermatid at the same time, as evidenced by the presence of four budding mitophers that remain linked to the same spermatid.

Supplementary Video 2

Time-lapse analysis of mitopher generation from a spermatid captured by light-sheet microscopy imaging (related to Fig. 2a–e). Live imaging of spermatids, marked with cell membrane-localized GFP::CATP-4 (green) and the mitochondrial stain MTDR (yellow) indicates the quick generation of a mitopher. The MTDR channel presents the mitochondrial signal in the budding mitopher (yellow arrow) and then in the released mitopher (blue arrow). In the merged channel, in one cell, the plasma membrane outward bud containing one mitochondrion is first initiated to form a budding mitopher (yellow arrow) and the mitopher is subsequently rapidly released from the spermatid (blue arrow). This mitopherogenesis takes approximately 3 s to complete. The first 22 s of the video shows the context of the spermatid displayed in Fig. 2a–e, which indicates no mitopher signals in the extracellular space at 0 s (before mitopherogenesis). This observation further supports that the mitopher observed at 2.58 s is newly generated by the indicated mitopherogenesis. Note that, due to the lighting angle of 30° and the imaging angle of 60° employed by the lattice light-sheet microscope, the resulting 3D volume displays the shape of a parallelogram, rather than a rectangle.

Supplementary Video 3

Dynamics of mitopher formation by spermatids visualized by dual-colour imaging (related to Fig. 2a–e). Similar to Supplementary Video 2, this dual-colour imaging video captured by light-sheet microscopy also illustrates the rapid generation of a mitopher from a freshly isolated spermatid. The cell membrane and mitochondria are marked with GFP::CATP-4 (green) and MTDR (yellow), respectively. This video detects the initiation of a budding mitopher (yellow arrow), characterized as a plasma-membrane bud containing a mitochondrion and subsequently, its swift release from the spermatid to form a mitopher (blue arrow). This mitopher generation process is finished within a few seconds. The red dashed lines separate the three individual cells. The first 21 s of the video show the context of the spermatid that will produce a mitopher before mitopherogenesis; no mitopher signals were observed in the extracellular space at 0 s.

Supplementary Video 4

Dynamics of mitopherogenesis from a spermatid analysed by ODT imaging (related to Fig. 2f). Time-lapse video of label-free visualization of the complete generation of a mitopher from a freshly isolated spermatid in hydrogel. The video depicts the outward translocation of a mitochondrion (green arrow) in an upward-diagonal direction, followed by its quick release to form the mitopher (blue arrow).

Supplementary Video 5

Dynamics of mitopher release inside a dissected germline (related to Fig. 2g). Time-lapse video from ODT imaging showing the biogenesis process of a mitopher inside a dissected germline. The video illustrates the initiation of a budding mitopher (orange arrow), which is followed by the rapid release of this mitochondrion-embedding bud from the spermatid, resulting in the formation of a mitopher (blue arrow). The released mitopher eventually moves away. The yellow dashed lines outline the cell boundary. The whole mitopher generation process takes only a few seconds to finish.

Supplementary Video 6

Time-lapse analysis of mitopherogenesis inside a dissected germline (related to Fig. 2g). Another time-lapse video captured by ODT imaging indicates the rapid biogenesis of a mitopher from spermatids within a dissected germline. It visualizes the initiation of a budding mitopher (orange arrow) and its quick disconnection from the spermatid, resulting in the formation of a mitopher (blue arrow). The released mitopher eventually moves away. The entire mitopherogenesis process is completed within only a few seconds. The yellow dashed lines depict the cell boundary of the region in which mitopherogenesis occurs.

Supplementary Video 7

Motility of in vitro-activated sperm from wild-type N2 and spe-8(lf) worms (related to Fig. 6). Time-lapse videos displaying the motility of pronase-activated sperm with featured pseudopodia (blue arrow) from N2 and spe-8(lf) males grown at 25 °C. Orange arrows point to sperm with normal motility and red arrows point to sperm with pseudopodia exhibiting poor motility. Our video shows the motility defect in part of the spe-8(lf) sperm with pseudopodia.

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Liu, P., Shi, J., Sheng, D. et al. Mitopherogenesis, a form of mitochondria-specific ectocytosis, regulates sperm mitochondrial quantity and fertility. Nat Cell Biol 25, 1625–1636 (2023). https://doi.org/10.1038/s41556-023-01264-z

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