Translationally controlled tumor protein (TCTP) is a potential target for cancer therapy. It functions as a growth regulating protein implicated in the TSC1–TSC2 –mTOR pathway or a guanine nucleotide dissociation inhibitor for the elongation factors EF1A and EF1Bβ. Accumulating evidence indicates that TCTP also functions as an antiapoptotic protein, through a hitherto unknown mechanism. In keeping with this, we show here that loss of tctp expression in mice leads to increased spontaneous apoptosis during embryogenesis and causes lethality between E6.5 and E9.5. To gain further mechanistic insights into this apoptotic function, we solved and refined the crystal structure of human TCTP at 2.0 Å resolution. We found a structural similarity between the H2–H3 helices of TCTP and the H5–H6 helices of Bax, which have been previously implicated in regulating the mitochondrial membrane permeability during apoptosis. By site-directed mutagenesis we establish the relevance of the H2–H3 helices in TCTP's antiapoptotic function. Finally, we show that TCTP antagonizes apoptosis by inserting into the mitochondrial membrane and inhibiting Bax dimerization. Together, these data therefore further confirm the antiapoptotic role of TCTP in vivo and provide new mechanistic insights into this key function of TCTP.
Inhibition of apoptosis plays a key role in permitting and favoring cell proliferation in malignant tissues.1 The characterization of proteins that promote or inhibit apoptosis, and the identification of their mechanism of action, constitute an important step towards the understanding of programmed cell death as a biological process and its implication in diseases. Recently, translationally controlled tumor protein (TCTP) has been suggested to function as an antiapoptotic protein in cultured cells.2, 3, 4, 5, 6, 7 Overexpression of TCTP resulted in an inhibition of etoposide-induced apoptosis,3 whereas antisense and siRNA knockdown experiments resulted in increased apoptosis.5, 7 It was more recently shown that TCTP binds to MCL12, 4, 7 and Bcl-xL,6 both antiapoptotic members of the Bcl2 family. However, the physiological relevance of these data in vivo and the molecular mechanisms through which TCTP protects cells from apoptosis remain to be established. TCTP shares no sequence homology with known antiapoptotic molecules nor it exhibits structural features that could account for such an antiapoptotic function.
TCTP is highly conserved in all eukaryotes and encodes for a hydrophilic protein of 18–23 kDa8, 9 that shows no sequence similarity with any other known proteins. TCTP was discovered over 20 years ago in Ehrlich acites tumor cells.10 Its name originates from the observation that TCTP transcripts accumulate in resting cells and are rapidly translated into the protein when the cells require it. The TCTP protein is expressed at low levels in resting cells, and at elevated levels in proliferating ones. TCTP expression in proliferating yeast (Saccharomyces cerevisiae (S.cerevisiae)) rises for instance to 100 000 copies per cell, which is higher than actin with 60 000 copies per cell.11 These data, in addition to very recent genetic studies, suggest that beside its antiapoptotic function TCTP may be required for cell growth and proliferation. For instance, Drosophila TCTP was shown to control cell growth and proliferation through regulation of Rheb-GTPase activity.12 In addition to its role in the control of cell survival and proliferation, TCTP was also reported to bind tubulin,13 to serve as a substrate of Polo-like kinase 1 (Plk1)14 and to act as a histamine releasing factor.15
TCTP is overexpressed in most tumor cells and its downregulation decreases the viability of those cells.5 Understanding the molecular mechanisms through which TCTP acts as a pro-survival factor in normal and cancer cells is therefore not only an interesting biological issue but it is also relevant for cancer therapy.16 In the present work, we show that TCTP functions as an antiapoptotic protein required for mouse embryonic development. Moreover, we solved the crystal structure of TCTP and found an interesting structural similarity to channel-forming helices17 of the pro-apoptotic protein Bax.18 This led us to explore one of the potential mechanism by which TCTP exerts its antiapoptotic function and to propose that this is occurring by insertion of TCTP into the mitochondrial membrane and inhibiting the dimerization of Bax.
tctp is required for cell survival and mouse embryonic development
The murine tctp gene is located on chromosome 14 and contains 6 exons.19 To generate a tctp mutant mouse line, a loxP site was inserted 5′ of exon 3 and two loxP sites flanking a neomycin resistance gene were inserted 3′ of exon 5 by homologous recombination in embryonic stem (ES) cells (Figure 1a). Correctly targeted ES clones (tctpNeo−R/+) were obtained, as assessed by PCR and Southern blot, and Cre-mediated excision of exons 3–5, which encodes for most of the tctp protein, was achieved upon electroporation of a Cre-recombinase expression vector in those cells. One clone that showed proper deletion of exons 3–5 (tctpΔ3−5/+), as identified by PCR analysis, was used to establish a tctp mutant mouse line. Mice were genotyped using a PCR-based approach using primers F1, R1, F2, and R2 (Figure 1b and c).
Heterozygous mice for this mutation (tctpΔ3−5/+) are viable and fertile. However, matings between heterozygous animals produced no viable homozygous mutant offspring (F2), indicating a recessive lethal phenotype (Supplementary Table 1).
Closer inspection revealed that most homozygous embryos (tctpΔ3−5/Δ3–5) died in utero between 6.5 and 9.5 d.p.c. The majority of the E6.5 and 100% of the E7.5 tctp-mutants exhibited an overall growth deficiency, ranging from minor to extremely severe (Figure 1d and e). No viable mutants were observed beyond E9.5 (Supplementary Table 1).
To study the effect of the tctp mutation on cellular proliferation, we measured in situ incorporation of 5-bromo-2′-deoxyuridine and expression levels of a phosphorylated form of histone H3, a marker of mitosis by immunohistochemistry. The data indicate that the tctp-mutant cells proliferate to a lesser extent compared to cells of the control embryos (not shown). To determine if the growth deficit of tctp-mutant embryos could also be accounted for by an excess of apoptosis, serially sectioned E6.5 embryos were analyzed by immunohistochemistry using an antibody specific to the cleaved form of caspase-3 (not shown) and TUNEL analysis (Figure 1e). These analyses revealed extensive cell death in the developing mutant embryos.
Western blot analysis using anti-TCTP antibodies detects only one band at the expected molecular weight in protein lysates from mouse embryo fibroblasts (MEFs) (not shown) and various mouse organs (Figure 1f). In the lysates of tctpΔ3−5/+ (het) animals, the TCTP signal is weaker in intensity, indicating that the tctp protein is expressed at lower levels in heterozygous tissues as compared to wildtype (wt) tissues (Figure 1f).
To test whether tctp is haploinsufficient in the control of cell proliferation and/or apoptosis, we next measured the cell proliferation capacity and/or the apoptotic response of MEFs and thymocytes prepared from wildtype and heterozygous tctp-mutants to various stress conditions. tctpΔ3−5/+ MEFs proliferated at the same rate in culture and underwent senescence similarly to wildtype controls (not shown). They also exhibited a similar cell cycle distribution and apoptotic response upon UV-C or doxorubicin exposure (not shown). We next measured apoptosis in freshly isolated thymocytes after γ–irradiation and dexamethasone (Dex) treatment. Susceptibility to cell death following DNA-damage in these cells is p53-dependent, whereas apoptosis in response to glucocorticoids (such as Dex) occurs independently of p53. Again, wild-type and heterozygous thymocytes were similarly sensitive to these treatments (not shown). Interestingly, however, we noticed a significant and dose-dependent decrease in TCTP levels in these cells following γ–irradiation (Figure 1g). Together, the data indicate that tctp is required for the survival and proper proliferation of cells during mouse embryonic development. Even if tctp levels are reduced in cells from heterozygous mice, tctp is not haploinsufficient in the control of cell proliferation and apoptosis. Finally, in response to DNA-damage, tctp steady state protein levels dramatically decrease in primary thymocytes, concomitantly with the onset of apoptosis.
The three-dimensional structure of human TCTP
The X-ray structure of human TCTP has been solved and refined at 2.0 Å resolution (Supplementary Table 2). Phases were obtained by molecular replacement, using the coordinates of Schizosaccharomyces pombe (S.pombe) TCTP (PDB code: 1H7Y) as a probe. The crystallographic asymmetric unit contained four TCTP molecules and 508 water molecules. The X-ray structure of human TCTP confirms a common TCTP fold described previously for S. pombe TCTP.20 The structure contains three α-helices (H1, H2, H3) and nine β-strands arranged in two distorted β-sheets, forming two hydrophobic cores (Figure 2). A α-helical hairpin is formed by the two long helices H2 and H3 and protects one face of the central β-sheet. In each subunit, a polypeptide encompassing residues 39–66 is not visible in the electron density map, but certainly protrudes out of the opposite side of the core β-sheet and is presumed to be disordered. In S. pombe TCTP, this portion was shown by NMR spectroscopy to be highly mobile.21 As noted previously, the TCTP fold has structural similarities with two other proteins: the guanine nucleotide-free chaperone Mss420 and the methionine sulfoxide reductase gene B (MsrB).22 However, the biological significance of these structural similarities remains unclear.
Comparison of the structure of human TCTP with those of proteins in the Protein Data Bank using DALI yielded a number of other interesting similarities. In particular, the pair of helices H2–H3 bear structural resemblance to the transmembrane domains of diphtheria toxin and bacterial colicins23 and to the pair of helices H5–H6 in Bcl2 family proteins17, 24, 25, 26, 27 such as Bax,18 despite negligible amino acid homology. It should be noted that there is no striking amino acid homology between the members of the Bcl2 family in the domain encompassing these H5–H6 (or H6–H7) pore-forming helices but, only a structural similarity.
Besides these two helices, the rest of the protein structure of the Bcl2 family members, including the Bcl2 Homology domains, fit within a common fold, which is not the case for TCTP.
Mutations in helices H2–H3 of human TCTP modify its antiapoptotic function
To investigate whether helices H2–H3 participate in the antiapoptotic function of TCTP, 293T cells were first incubated in the presence of staurosporine, and the levels of TUNEL-positive cells and the extent of PARP cleavage were monitored. TCTP decreases both the levels of TUNEL-positive cells (Figure 3a) and the extent of PARP cleavage (Figure 3b) induced by staurosporine. Strikingly, TCTP also significantly inhibits Bax-induced apoptosis in 293T cells (Figures 3b and d–f) and in N2A cells (data not shown).
We then investigated the effects of mutations of residues (E109 and K102) close to the turn between the two helices H2 and H3 of TCTP (Figure 4). A mutation of the hairpin residue E109 to alanine alters slightly the effect of TCTP on staurosporine-induced apoptosis, while a mutation of K102 to alanine significantly diminishes the effect (Figure 3a and c). The effect of the double mutation of E109 and K102 is identical to the effect of the K102A mutation alone. Both single mutants and the double mutant diminish the antiapoptotic effect of TCTP on Bax-induced apoptosis (Figure 3f). Since the helices H2–H3 of TCTP appear to play a role in the protein's antiapoptotic activity, we wished to investigate the effect of replacing helices H5–H6 of Bax by helices H2–H3 of TCTP on the induction of apoptosis. The chimeric protein, BTB (Bax/TCTP H2–H3/Bax), expressed in 293T cells has a strong pro-apoptotic function, comparable to that of wild-type Bax as assessed both by levels of TUNEL-positive cells (Supplementary Figure 1a) and the extent of PARP cleavage (Supplementary Figure 1b). The double mutation in BTB of both residues (K126 the residue corresponding to K102 in TCTP and E133 the residue corresponding to E109 in TCTP) to alanine resulted in a significant reduction in pro-apoptotic strength.
The antiapoptotic function of TCTP occurs at the mitochondria where it inhibits Bax-induced damage
To establish whether or not the antiapoptotic activity of TCTP takes place at the level of the mitochondria in the above experiments, we used an acellular system of purified mitochondria.28 The purified mitochondria were directly incubated (Figure 5a) with the in vitro translation (IVT) products of the proteins. The insert in Figure 5a shows the expression of the proteins added. In these assays (Figure 5a, Supplementary Figure 2), TCTP inhibits mitochondrial damage induced by Bax, while the double mutant of TCTP in which both E109 and K102 are replaced by alanine is much less efficient in inhibiting Bax-induced damage. These results agree well with those obtained by monitoring levels of TUNEL-positive cells and the extent of PARP cleavage and suggest that the antiapoptotic function of TCTP takes place, at least in part, in the mitochondria, with TCTP inhibiting the function of Bax.
TCTP anchors into the mitochondria and inhibits the dimerization of Bax
We further tried to identify how TCTP would ‘neutralize’ the apoptotic effect of Bax. We first investigated whether wild-type or mutant TCTP binds directly or indirectly Bax. Neither a GST-IVT pull down nor a coimmunoprecipitation of endogenous or overexpressed Bax and TCTP yielded any positive results (data not shown), in agreement with previous reports suggesting that there was no direct interaction between TCTP and Bax.4, 7 To further evaluate the potential role of TCTP at the level of the mitochondria, we assessed the anchorage of TCTP into the mitochondrial membranes. For that purpose, freshly isolated mitochondria were incubated in the presence of recombinant TCTP and treated with Na2CO3, which eliminates loosely bound proteins and spares proteins that are anchored into the membranes. Figure 5b shows that approximately 0.25 pmol TCTP or TCTP-EK (lanes 2, 3) do anchor into 125 μg of mitochondria. This amount represents less than 1% of the total amount of recombinant TCTP that was allowed to incubate in the presence of the mitochondria. 0.5–20 pmol TCTP were also loaded on the same western blot to allow a quantitative comparison. No difference between TCTP and TCTP-EK could be detected with regard to their anchorage capacity into the mitochondria. The anchorage of proteins into the mitochondrial membrane is a well regulated process.29 As documented in Supplementary Figure 3, Bax anchors into the mitochondrial membrane only when activated by tBid. tBid binds loosely, is sensitive to alkali treatment and thus is not anchored into the mitochondrial membrane.29
We then analyzed whether the anchorage of TCTP could interfere with the pro-apoptotic function of Bax. Figure 5c (left panel) indicates that increasing amounts of TCTP do not inhibit the anchorage of Bax monomers but do inhibit the dimeric form of anchored Bax. On the other hand, TCTP-EK (Figure 5c right panel) does not inhibit the formation of this dimeric form indicating that intact helices of TCTP are necessary to interfere with the dimerization process of Bax when already anchored into the mitochondrial membranes. tBid and TCTP (or TCTP-EK) alone do not generate any Bax signal (data not shown). To consolidate the fact that the 30–35 kDa band, recognized by the polyclonal rabbit anti-Bax antibodies, corresponds to a dimeric form of Bax, we performed a trypsin digestion assay. Trypsin digestion is highly efficient on a wide variety of proteins among which is the monomeric form of Bax. In contrast, the dimeric form of Bax is resistant to complete digestion by trypsin, sparing a fragment of 15 kDa that is recognized by this antibody which was directed against a synthetic peptide corresponding to amino acids 43–61 of human Bax (Figure 5d lane 2) (Lucken-Ardjomande S, Montessuit S, and Martinou JC. Cell Death Differ (in press)). Monoclonal anti-Bax antibodies directed against amino acids 3–16 of Bax do not recognize this 15 kDa undigested peptide, since this region has been digested by trypsin (data not shown). Together, these results suggest that the 30–35 kDa band corresponds to Bax dimers. Nevertheless this assay does not allow discrimination between a homo- or heterodimeric form of Bax.
Since the discovery of TCTP by Yenofsky, it became clear that this protein is implicated in multiple biological processes (Figure 6a) such as cell growth, division, proliferation, and inhibition of programmed cell death.2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 16 It also functions as a histamine releasing factor15 and is secreted through the non-classical exosome pathway interacting with TSAP6, a p53-regulated gene.30, 31 It seems that all these different functions of TCTP are related to specific association with various protein partners. The cell growth regulatory function of TCTP is related to its guanine nucleotide dissociation inhibitor activity for the elongation factors EF1A and EF1Bβ.32 We previously suggested that by inhibiting the dissociation of GDP from these two components of the translational machinery, TCTP would slow down the elongation process, this way avoiding ‘skipping’ and finally rendering elongation more efficient. A second observation implicating TCTP in cell growth, was recently made through the study of Drosophila TCTP genetics.12 This study shows that TCTP would regulate the TSC1 and TSC2 pathway where it would function as a GEF-like protein for Rheb. Being upstream of the mTOR pathway, would place TCTP in a strategic position for regulating cell growth. It is however difficult to reconcile these Drosophila results with the yeast, where TSC1 and TSC2 do not exist and where Rheb does not appear to function in mTOR pathway; despite highly elevated levels of TCTP. It is interesting to note that TCTP would be implicated in the processes cell growth, proliferation and survival since this relates so closely to the TSC1, TSC2, mTOR pathway. Regardless of the mechanism involved, the data presented herein confirm an important contribution of TCTP in the control of cell growth and proliferation. Embryos lacking tctp fail to grow and mutant cells to proliferate.
The crystal structure of human TCTP is highly similar to that of TCTP from S. pombe, confirming the common fold expected from the sequence homology.20 As noted previously, TCTP shows structural homology to Mss4, a protein originally described as guanine nucleotide exchange factor for Rab proteins but later identified as a guanine nucleotide-free chaperone.33 Mss4, however, lacks helices H2–H3, contains a zinc-binding site absent in TCTP and differs in the topological placement of a small β-sheet and a long mobile loop.20 Despite a common core fold, these structural differences and the lack of any clear evidence for functional similarities weaken the suggestion that TCTP and Mss4 families of proteins are related. Similarly, the structural homology with MsrB22 does not seem to extend to any common function, since the catalytic residues of MsrB are absent in TCTP.
Structural analysis of TCTP and members of the Bcl2 family yields some insight into possible mechanisms for the control of apoptotic processes. The structure of Bcl-xL25 revealed a similarity between its H5–H6 and the channel-forming domains of diphtheria toxin and bacterial colicins A and E1.23 With the determination of a number of structures of proteins from the Bcl2 family,17 it has become clear that pro- and antiapoptotic members of the family have similar folds with the central core helices H5–H6 flanked by the other α-helices and function as regulators of the mitochondrial membrane permeability where they would influence the opening of specialized pores.17, 24, 25, 26, 27 It is presumed today that the balance between the pro-apoptotic and the antiapoptotic will define the level of permeability of those pores rather than the helices creating the pores. The crystal structure of TCTP reveals a similar pair of helices and we have sought here to characterize the role of these helices in the antiapoptotic function of the protein.
It has been inferred that TCTP is antiapoptotic since decreasing its protein levels leads to apoptosis or reversion of malignant phenotypes.2, 3, 4, 5, 6, 7 Importantly, TCTP has been shown to bind to MCL12, 4, 7 and Bcl-xL,6 both antiapoptotic members of the Bcl2 family. TCTP is therefore closely associated with apoptotic processes. We show here that loss of tctp expression results in a dramatic increase in apoptotic cell death during embryogenesis. This phenotype, together with the proliferation defect observed in these mutants, is sufficient to explain why the tctp-null mice die early during embryogenesis. Of note, another tctp-mouse model has recently been generated and the data reported34 are in keeping with these observations. Together, these genetic data clearly highlight a critical role for tctp in the control of cell survival in vivo. Moreover, mutagenesis of residues in helices H2–H3 of TCTP reduces its antiapoptotic function. The creation of a chimeric protein, BTB, in which the helices H2–H3 of TCTP replace helices H5–H6 of Bax, does not disrupt the pro-apoptotic function of this Bcl2 family protein. Mutations in BTB corresponding to those made in TCTP do however disrupt this activity. Together these results show that the pair of helices function equally well in the context of a pro- or antiapoptotic protein, and that mutations diminish this activity. It may therefore be that the precise molecular event in which the pair of helices participates is similar in the context of TCTP or BTB. Sequence homology for these helices is low even between members of the Bcl2 family, although the helices are structurally and functionally conserved.17, 24, 25, 26, 27 As a result, the helices are excluded from the definition of the Bcl2 homology domain,1 yet the similarity found here suggests a structural feature common to a set of proteins involved in apoptotic processes.
Previous immunofluorescence data suggested that TCTP colocalizes with Bcl-xL and MCL1 and therefore acts at the mitochondria, similarly to other key regulators of apoptosis. However, the high abundance of TCTP in the cytoplasm renders interpretation of those data rather complicated. For this reason we used a purified fraction of mitochondria to perform our experiments. Our data indicate that TCTP antagonizes the function of Bax and requires its pair of helices to participate in antiapoptotic activity at the level of the mitochondria. Nevertheless, it is clear that those H2–H3 helices are not per se required for the binding and anchorage of the protein into the mitochondria as revealed by the mutant TCTP-EK, which binds and anchors as efficiently as wild-type TCTP to the mitochondria. There are at least two possible interpretations to explain this weakening of mutant TCTP. It is possible that while the amount of TCTP and TCTP-EK protein binding and anchoring in the mitochondria remain similar, the conformation of the protein in the membrane and its binding to MCL1 and Bcl-xL would be affected. It is also possible that the mutation of these helices would impair to some extent the dimerization of TCTP.
The ‘rheostat’ model suggests that the balance between pro- and antiapoptotic members of the Bcl2 family determines the fate of a cell. However, this model is not sufficient to explain our results because TCTP does not bind directly to Bax (Liu et al., 20054; Zhang et al., 20027; our results). We therefore propose that TCTP would bind antiapoptotic members of the Bcl2 family, as described for MCL12, 4, 7 and Bcl-xL,6 and possibly arrange them in such a way into the mitochondrial membranes that their antiapoptotic action would be more efficient. We suggest that this is the ‘enhancer’ part of the model that would regulate the efficiency of the ‘rheostat’. Furthermore, we suggest that TCTP would anchor into the mitochondrial membrane and inhibit the formation of dimeric Bax. One possible interpretation of this would be that TCTP, following its anchorage into the membrane, would separate and distance Bax homodimers (Figure 6b), but this necessitates further investigation.
Materials and Methods
Generation of tctp knockout mice and genotyping
Genomic DNA was prepared from 129/Svj ES cells using established procedures. PCR was performed using expand long template (Roche, France) in buffer 1 following the manufacturer's recommendations.
Three fragments (a, b and c) overlapping 8,8 kb of the genomic region containing the murine tctp gene on chromosome 14 were amplified using following primers:
These 3 amplicons were cloned in a pBluescript (pBS) vector digested with NotI/SalI. One 46 bp oligonucleotide containing a LoxP site floxed by 2 EcoRV sites and one neomycin resistance gene with one LoxP site at each end were cloned respectively in 5′ of exon 3 and in 3′ of exon 5. This construct was linearized and injected into C57Bl6 ES cells to obtain recombinant mice in which the exons 3, 4 and 5 were excised upon Cre-mediated recombination.
Genotyping was performed on genomic DNA from mouse tails or yolk sacs. A PCR-based strategy was developed to distinguish between the wild-type and tctp mutant alleles. The primers are as follows (see Figure 1a):
When primers F1, R1 and R2 are used in the same reaction (see Figure 1c), a 423 bp fragment indicates the presence of the mutated allele (tctpΔ3–5), whereas 300 bp fragment is amplified from the wild-type allele (see Figure 1b).
Mouse embryo fibroblasts were prepared from 12.5-days-old embryos using established procedures. Cells and organs were lysed in hypertonic buffer (50 mM Tris–HCl pH 7.5, 250 mM NaCl, 10 mM EDTA, 1 mM DTT and 1% NP40).
For sectioning, embryos were fixed in 4% paraformaldehyde/1 × PBS overnight, paraffin embedded, sectioned and stained in hematoxylin and eosin.
Immunohistochemistry and TUNEL assay
The following antisera were used: anticleaved caspase-3 (1/200, Cell Signaling); antiphosphorylated histone-H3 (PH3) (1/200, Upstate). Avidin-conjugated peroxidase (ABC and DAB kits from Vector Laboratories) was used for immunodetection. TUNEL assay was used to detect apoptotic cells on sections of paraffin-embedded embryos using the ‘In Situ Death Detection Kit’ (TmR red, Roche). After TUNEL staining, embryo sections were counterstained and mounted using Vectashield with DAPI (Vector H-1200).
Crystallization and data collection
Initial crystallization conditions were found by screening different precipitating agents. Different crystal forms were crystallized by the hanging drop vapor-diffusion method at 4°C using polyethylene glycol (PEG) 5000 MME as the crystallization agent. Crystallization trials were set up using equal volumes of protein (concentrated to 3 mg/ml) and reservoir. The best crystals were grown against a reservoir containing 25% PEG 5000 MME, 50 mM Bis Tris (Bis(2-hydroxyethyl) iminotris (hydroxymethyl) methane) buffer pH 6.2, 50 mM magnesium acetate and 3% 1,6-hexanediol. These crystals diffracted beyond 2.0 Å resolution at the European Synchrotron Radiation Facility ID14-1 beam line, and belong to the monoclinic space group P21, with unit-cell parameters a=63.8, b=93.7, c=70.4 Å, ß=114.9. A complete data set was obtained from a single crystal cooled to 140 K from 150 frames of 1° oscillation (wavelength of 0.934 Å, crystal-detector distance of 180 mm) using an ADSC Q4R CCD detector. The estimated Vm of 2.3 Å3/Da indicates four molecules of TCTP in the asymmetric unit and corresponds to a solvent content of 47%, assuming a protein density of 1.22 g/cm3. Data were processed with the package HKL2000.35
The structure of human TCTP was solved by the molecular replacement method (Program MOLREP, AMoRe supplemented in CCP436) using the NMR coordinates of S. pombe TCTP (PDB code: 1H7Y). The refined model contains four human TCTP molecules of 155 residues (residues 39–66 are not visible in the final electron density map) and 508 water molecules. The crystallographic R-factor is 19.1% using all reflections between 25 and 2.0 Å with no sigma cutoff (Rfree=23.8%, using a random sample containing 7.5% of the data). The models were refined with the CNS program,37 using the Engh and Huber stereochemical parameter set. All rebuilding and graphics operations were done with O and related Uppsala programs.38 All crystallographic calculations were carried out with the CCP4 package.36 The stereochemistry of the model was inspected using Procheck39 and the quality of the refined structure was assessed using the Biotech validation suite for protein structures.40 In each monomer, 92.9% of the residues are in the most favored regions of the Ramachandran plot (7.1% in additional allowed regions). Data collection statistics and refinement statistics are presented in Supplementary Table 2.
Coordinates of human TCTP at 2.0 Å resolution have been deposited in the Protein Data Bank (accession code: 1YZ1).
Figures were prepared with PyMOL (Delano Scientific, http://www.pymol.org) and TeXshade.
Expression constructs and mutagenesis
The coding regions of human Bax-α and human TCTP were cloned into the EcoRI and XhoI sites of the plasmid vector pCDNA3.1. (Invitrogen), with a HA tag and a Flag tag respectively. BTB was obtained by replacing Bax H5 and H6 helices by TCTP H2 and H3 helices.
This BTB sequence corresponds to the following construction: BAX1−106, TG, TCTP85−126, RT, BAX150−192. The TCTP insert has been underlined in the BTB sequence above.
TCTP mutants TCTP-E109A, TCTP-K102A, TCTP-EK and BTB mutants BTB-E133A, BTB-EK were obtained using QuickChange site-directed mutagenesis (Stratagene) following the manufacturer's protocol. All mutants were confirmed by automated DNA sequencing.
Purification of recombinant protein
Full-length TCTP cDNA was cloned in-frame in the pGEX-6P vector (GE Health Care). Expression of the GST-fusion protein in BL21 (DE3) bacteria strain (Stratagene) was induced by the addition of 0.1 mM IPTG for 16 h at room temperature. Cells were lysed for 30 min in a 1% Nonidet P-40 buffer (10 mM Tris–HCl, pH 7.5, 150 mM NaCl, 10% glycerol, 1 mM EDTA, plus the protease inhibitors 1 mM AEBSF, 1% aprotinin, 1 mM leupeptin, and 2 mM pepstatin (all reagents from ICN)). The lysates were clarified by sonication and centrifugation (16 000 × g) for 30 min at 4°C, and the GST-fusion protein was purified with glutathione-sepharose beads (GE Health Care). The beads were washed three times with the 1% Nonidet P-40 buffer and TCTP protein was cleaved from GST tag by Prescission protease (GE Health Care). The quality of the purified protein was assessed by SDS-PAGE and Coomassie blue staining. The purified protein was dialyzed and stored at 4°C in 50 mM Hepes pH 7 and 100 mM NaCl.
293T cells were maintained in DMEM containing 10% (v/v) FBS and 1% (v/v) penicillin–streptomycin–glutamine. 293T cells were transiently transfected by the calcium phosphate method. In all experiments, carrier DNA was added to maintain equal plasmid concentrations between different samples.
Rabbit anti-TCTP antibodies were generated against the human protein TCTP. The corresponding polyclonal antiserum was affinity-purified on a column coupled with the protein (Agro-Bio). This antibody is used at a 1/4000 dilution in western blot analysis. Goat anti-Actin I19 antibody (Santa Cruz Biotechnology) or mouse monoclonal anti-γ-tubulin (SIGMA) was used at 1/1000 for equal loading. Secondary antibodies, antigoat, antirat, antirabbit or antimouse HRP-linked (Calbiochem) were used at a 1/5000 dilution. Anti-cytochrome c (6H2) and anti-Smac (V17) (Santa Cruz Biotechnology), anti-HA (Babco), anti-Flag (M2, Sigma), anti-PARP (C2.10, ICN), anti-MTCO1 (ab14705, abcam), anti-Bax (Pharmingen).
The TUNEL assay was performed using an In Situ Cell Death detection kit (Roche Applied Science) according to the manufacturer's instructions and cells were analyzed in a FACScan cell sorter (Becton Dickinson).
Binding of TCTP to the mitochondria and cytochrome c oxydase assay
Mitochondria were isolated28 from normal rat liver using a mitochondria isolation kit (Sigma Aldrich). For mitochondrial targeting assays, [35S]Met-labeled proteins (GE Health Care) were synthesized from cDNAs using the TNT-coupled Transcription/Translation system (Promega, France). Radio-labeled Bax, TCTP, TCTP-EK, were incubated with isolated mitochondria (2.5 mg proteins/ml) at 30°C for 1 h in 40 μl of standard import buffer (250 mM sucrose, 80 mM KCl, 10 mM MgCl2, 10 mM malic acid, 8 mM succinic acid, 1 mM ATP-Mg2+, 20 mM MOPS, pH 7.5). Where indicated, 35S-Bax was pre-incubated with radiolabeled TCTP or TCTP-EK for 30 min prior to incubation with mitochondria. The integrity of the outer membrane was assessed by measuring cytochrome c oxidase activity in mitochondrial membranes in the presence and absence of a detergent, n-dodecyl-D-maltoside, one of few detergents that allows the cytochrome c oxidase dimer to be maintained in solution at low detergent concentrations. The ratio between activity in the presence and absence of the detergent is a measure of the integrity of the mitochondrial outer membrane. The assay was performed using a cytochrome c oxidase assay kit (Sigma), according to the manufacturer's instructions. Alternatively, cytochrome c was detected in the supernatant of the mitochondria by western blot analysis using anti-cytochrome c antibodies.
Anchorage assay of TCTP into the mitochondrial membrane
Mitochondria were purified from rat liver by differential centrifugation. 125 μg of freshly prepared mitochondria were incubated in the presence of 5–20 nM recombinant TCTP or TCTP-EK at 30°C for 10 min. Samples were washed and treated with Na2CO3 followed by centrifugation at 100 000 × g for 1 h.29
Bax dimerization assay
Mitochondria preparation and incubation with TCTP (20 nM) or TCTP-EK (20 nM) were performed as above. Hereafter, recombinant tBid (5 nM) was added for 5 min at 30°C, followed by an incubation with recombinant Bax (10 nM) for 7 min at 30°C. Na2CO3 treatment was performed as above followed by western blot analysis.
Trypsin digestion assay
250 μg of freshly prepared mitochondria were incubated in the presence of Bax (100 nM) and tBid (10 nM) for 10 min at 30°C and treated with Na2CO3 as above. Samples were resuspended in 50 μl KCl buffer and 10 μg of trypsin was added. Digestion occurred for 2 h at 30°C and analyzed by western blot using the polyclonal rabbit antibody directed against the amino acids 43–61 of human Bax (Pharmingen) (Lucken-Ardjomande S, Montessuit S, and Martinou JC. Cell Death Differ (in press)). This antibody detects the undigested 15 kDa fragment of Bax dimers.
translationally controlled tumor protein
mouse embryo fibroblasts
poly (ADP-ribose) polymerase
terminal deoxynucleotidyl transferase-mediated dUTP nick end-labeling
in vitro translation
tuberous sclerosis complex
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This study is part of the PhD thesis of Dominique Duflaut (Université Paris XI) and Alexandra Lespagnol (Université Paris VII). We thank the staff of the European Synchrotron Radiation Facility beam line ID14-1 for use of their synchrotron instrumentation and help during data collection. We are in debt to Pierre Chambon for his longstanding support and grateful to Tania Sorg and Daniel Metzger for their help and advice in the generation of the tctp knockout mice. CB is supported by a grant from the Belgian Foundation for Cancer Research.
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Susini, L., Besse, S., Duflaut, D. et al. TCTP protects from apoptotic cell death by antagonizing bax function. Cell Death Differ 15, 1211–1220 (2008). https://doi.org/10.1038/cdd.2008.18
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