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Microfluidic assay for simultaneous culture of multiple cell types on surfaces or within hydrogels

Abstract

This protocol describes a simple but robust microfluidic assay combining three-dimensional (3D) and two-dimensional (2D) cell culture. The microfluidic platform comprises hydrogel-incorporating chambers between surface-accessible microchannels. By using this platform, well-defined biochemical and biophysical stimuli can be applied to multiple cell types interacting over distances of <1 mm, thereby replicating many aspects of the in vivo microenvironment. Capabilities exist for time-dependent manipulation of flow and concentration gradients as well as high-resolution real-time imaging for observing spatial-temporal single-cell behavior, cell-cell communication, cell-matrix interactions and cell population dynamics. These heterotypic cell type assays can be used to study cell survival, proliferation, migration, morphogenesis and differentiation under controlled conditions. Applications include the study of previously unexplored cellular interactions, and they have already provided new insights into how biochemical and biophysical factors regulate interactions between populations of different cell types. It takes 3 d to fabricate the system and experiments can run for up to several weeks.

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Figure 1: Schematic and photograph of the microfluidic cell culture assay.
Figure 2: Photolithography and soft lithography procedures.
Figure 3: Procedure for hydrogel-incorporating microfluidic assay preparation.
Figure 4: Using collagen.
Figure 5: Cell culture in microfluidic assay.
Figure 6: Characterization of the diffusion profile of applied VEGF.
Figure 7: Confocal images of 3D angiogenic response into the type 1 collagen (2.0 mg ml−1, polymerized at pH 7.4) induced by VEGF diffused from the right channel.
Figure 8: 3D interaction of various types of cells with incorporated hydrogel.
Figure 9
Figure 10: Examples of cell-cell 3D interaction in hydrogel.

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References

  1. Pampaloni, F., Reynaud, E.G. & Stelzer, E.H.K. The third dimension bridges the gap between cell culture and live tissue. Nat. Rev. Mol. Cell Biol. 8, 839–845 (2007).

    Article  CAS  Google Scholar 

  2. Even-Ram, S. & Yamada, K.M. Cell migration in 3D matrix. Curr. Opin. Cell Biol. 17, 524–532 (2005).

    Article  CAS  Google Scholar 

  3. Feder-Mengus, C., Ghosh, S., Reschner, A., Martin, I. & Spagnoli, G.C. New dimensions in tumor immunology: what does 3D culture reveal? Trends Mol. Med. 14, 333–340 (2008).

    Article  CAS  PubMed  Google Scholar 

  4. Griffith, L.G. & Swartz, M.A. Capturing complex 3D tissue physiology in vitro. Nat. Rev. Mol. Cell Biol. 7, 211–224 (2006).

    Article  CAS  PubMed  Google Scholar 

  5. Yamada, K.M. & Cukierman, E. Modeling tissue morphogenesis and cancer in 3D. Cell 130, 601–610 (2007).

    Article  CAS  PubMed  Google Scholar 

  6. Cukierman, E., Pankov, R. & Yamada, K. Cell interactions with three-dimensional matrices. Curr. Opin. Cell Biol. 14, 633–640 (2002).

    Article  CAS  PubMed  Google Scholar 

  7. Wenger, A. et al. Modulation of in vitro angiogenesis in a three-dimensional spheroidal coculture model for bone tissue engineering. Tissue Eng. 10, 1536–1547 (2004).

    Article  CAS  PubMed  Google Scholar 

  8. Ghajar, C.M., Blevins, K.S., Hughes, C.C.W., George, S.C. & Putnam, A.J. Mesenchymal stem cells enhance angiogenesis in mechanically viable prevascularized tissues via early matrix metalloproteinase upregulation. Tissue Eng. 12, 2875–2888 (2006).

    Article  CAS  PubMed  Google Scholar 

  9. Chung, S., Sudo, R., Vickerman, V., Zervantonakis, I. & Kamm, R. Microfluidic platforms for studies of angiogenesis, cell migration, and cell-cell interactions. Ann. Biomed. Eng. 38, 1164–1177 (2010).

    Article  PubMed  Google Scholar 

  10. Park, J.W., Vahidi, B., Taylor, A.M., Rhee, S.W. & Jeon, N.L. Microfluidic culture platform for neuroscience research. Nat. Protoc. 1, 2128–2136 (2006).

    Article  CAS  PubMed  Google Scholar 

  11. Paguirigan, A.L. & Beebe, D.J. Protocol for the fabrication of enzymatically crosslinked gelatin microchannels for microfluidic cell culture. Nat. Protoc. 2, 1782–1788 (2007).

    Article  CAS  PubMed  Google Scholar 

  12. Englert, D.L., Manson, M.D. & Jayaraman, A. Investigation of bacterial chemotaxis in flow-based microfluidic devices. Nat. Protoc. 5, 864–872 (2010).

    Article  CAS  PubMed  Google Scholar 

  13. Chung, S., Sudo, R., Zervantonakis, I., Rimchala, T. & Kamm, R. Surface treatment induced three dimensional capillary morphogenesis in a microfluidic platform. Adv. Mater. 21, 4863–4867 (2009).

    Article  CAS  PubMed  Google Scholar 

  14. Chung, S. et al. Cell migration into scaffolds under co-culture conditions in a microfluidic platform. Lab Chip. 9, 269–275 (2009).

    Article  CAS  PubMed  Google Scholar 

  15. Sudo, R. et al. Transport-mediated angiogenesis in 3D epithelial coculture. FASEB J. 23, 2155–2164 (2009).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  16. Vickerman, V., Blundo, J., Chung, S. & Kamm, R. Design, fabrication and implementation of a novel multi parameter control microfluidic platform for three-dimensional cell culture and real-time imaging. Lab Chip. 8, 1468–1477 (2008).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  17. Shin, Y. et al. In vitro 3D collective sprouting angiogenesis under orchestrated ANG-1 and VEGF gradients. Lab Chip. 11, 2175–2181 (2011).

    Article  CAS  PubMed  Google Scholar 

  18. Jeong, G.S. et al. Sprouting angiogenesis under a chemical gradient regulated by interaction with endothelial monolayer in microfluidic platform. Anal Chem. 83, 8454–8459 (2011).

    Article  CAS  PubMed  Google Scholar 

  19. Wan, C., Chung, S. & Kamm, R.D. Differentiation of embryonic stem cells into cardiomyocytes in a compliant microfluidic system. Ann Biomed. Eng. 39, 1840–1847 (2011).

    Article  PubMed  Google Scholar 

  20. Mack, P.J. et al. Biomechanical regulation of endothelium-dependent events critical for adaptive remodeling. J. Biol. Chem. 284, 8412–8420 (2009).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  21. Kothapalli, C.R. et al. A high-throughput microfluidic assay to study axonal response to growth factor gradients. Lab Chip. 11, 497–507 (2011).

    Article  CAS  PubMed  Google Scholar 

  22. Zervantonakis, I.K. et al. Concentration gradients in microfluidic 3D matrix cell culture systems. Inter. J. Micro-Nano Scale Transport 1, 27–36 (2010).

    Article  CAS  Google Scholar 

  23. Amadi, O.C. et al. A low resistance microfluidic system for the creation of stable concentration gradients in a defined 3D microenvironment. Biomed. Microdevices 12, 1027–1041 (2010).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  24. Jeon, J.S., Chung, S., Kamm, R.D. & Charest, J.L. Hot embossing for fabrication of a microfluidic 3D cell culture platform. Biomed.. Microdevices 13, 325–333 (2011).

    Article  PubMed  PubMed Central  Google Scholar 

  25. Zervantonakis, I.K., Kothapalli, C.R., Chung, S., Sudo, R. & Kamm, R.D. Microfluidic devices for studying heterotypic cell-cell interactions and tissue specimen cultures under controlled microenvironments. Biomicrofluidics 5, 13406 (2011).

    Article  PubMed  Google Scholar 

  26. Qin, D., Xia, Y. & Whitesides, G.M. Soft lithography for micro-and nanoscale patterning. Nat. Protoc. 5, 491–502 (2010).

    Article  CAS  PubMed  Google Scholar 

  27. Jeong, G.S. et al. Microfluidic assay of endothelial cell migration in 3D interpenetrating polymer semi-network HA-Collagen hydrogel. Biomed. Microdevices 13, 717–723 (2011).

    Article  CAS  PubMed  Google Scholar 

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Acknowledgements

We acknowledge support to S.C. from the National Research Foundation of Korea (grant no. 2010-0023975), to R.S. from Japan Science and Technology Agency and Japan Society for Promotion of Science (22680037, G2212) and to R.D.K. from the National Science Foundation (CBET-0939511). We thank Y. Kikkawa, Tokyo University of Pharmacy and Life Sciences, for generously providing anti-CD146 antibody.

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Contributions

Y.S. and S.H. equally contributed to this protocol, designing and carrying out the experiments and writing the paper. J.S.J., K.Y., I.K.Z., R.S. and S.C. designed and carried out the experiments. S.C. is responsible for all the experiments described in this article and preparation of the paper. R.D.K. is responsible for providing guidance for the experiments and for editing the paper.

Corresponding authors

Correspondence to Roger D Kamm or Seok Chung.

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The authors declare no competing financial interests.

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Shin, Y., Han, S., Jeon, J. et al. Microfluidic assay for simultaneous culture of multiple cell types on surfaces or within hydrogels. Nat Protoc 7, 1247–1259 (2012). https://doi.org/10.1038/nprot.2012.051

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