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A fluoro-Nissl dye identifies pericytes as distinct vascular mural cells during in vivo brain imaging

Abstract

Pericytes and smooth muscle cells are integral components of the brain microvasculature. However, no techniques exist to unambiguously identify these cell types, greatly limiting their investigation in vivo. Here we show that the fluorescent Nissl dye NeuroTrace 500/525 labels brain pericytes with specificity, allowing high-resolution optical imaging in the live mouse. We demonstrate that capillary pericytes are a population of mural cells with distinct morphological, molecular and functional features that do not overlap with precapillary or arteriolar smooth muscle actin-expressing cells. The remarkable specificity for dye uptake suggests that pericytes have molecular transport mechanisms not present in other brain cells. We demonstrate feasibility of longitudinal pericyte imaging during microvascular development and aging and in models of brain ischemia and Alzheimer's disease. The ability to easily label pericytes in any mouse model opens the possibility of a broad range of investigations of mural cells in vascular development, neurovascular coupling and neuropathology.

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Figure 1: NeuroTrace labels vascular cells lining capillaries in the live mouse brain.
Figure 2: NeuroTrace exclusively labels Pdgfrb-expressing capillary pericytes.
Figure 3: NeuroTrace labels capillary pericytes and not arteriolar smooth muscle cells.
Figure 4: NeuroTrace-labeled pericytes are embedded in the basal lamina.
Figure 5: NeuroTrace does not label α-SMA-expressing mural cells.
Figure 6: NeuroTrace-labeled pericytes do not exhibit spontaneous vasomotion.
Figure 7: In vivo imaging of pericytes during development and into advanced aging.
Figure 8: Pericyte imaging in Alzheimer's mouse models in vivo.

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References

  1. Rouget, C. Note sur le développement de la tunique contractile des vaisseaux. Comptes rendus des Séances de l′Acad. des Sciences 79, 559 (1874).

    Google Scholar 

  2. Armulik, A., Genové, G. & Betsholtz, C. Pericytes: developmental, physiological, and pathological perspectives, problems, and promises. Dev. Cell 21, 193–215 (2011).

    Article  CAS  PubMed  Google Scholar 

  3. Iadecola, C. & Nedergaard, M. Glial regulation of the cerebral microvasculature. Nat. Neurosci. 10, 1369–1376 (2007).

    Article  CAS  PubMed  Google Scholar 

  4. Daneman, R., Zhou, L., Kebede, A.A. & Barres, B.A. Pericytes are required for blood-brain barrier integrity during embryogenesis. Nature 468, 562–566 (2010).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  5. Armulik, A. et al. Pericytes regulate the blood-brain barrier. Nature 468, 557–561 (2010).

    CAS  PubMed  Google Scholar 

  6. Shih, A.Y. et al. Robust and fragile aspects of cortical blood flow in relation to the underlying angioarchitecture. Microcirculation 22, 204–218 (2015).

    Article  PubMed  PubMed Central  Google Scholar 

  7. Hill, R.A. et al. Regional blood flow in the normal and ischemic brain is controlled by arteriolar smooth muscle cell contractility and not by capillary pericytes. Neuron 87, 95–110 (2015).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  8. Winkler, E.A., Bell, R.D. & Zlokovic, B.V. Central nervous system pericytes in health and disease. Nat. Neurosci. 14, 1398–1405 (2011).

    CAS  PubMed  PubMed Central  Google Scholar 

  9. Iadecola, C. Neurovascular regulation in the normal brain and in Alzheimer's disease. Nat. Rev. Neurosci. 5, 347–360 (2004).

    Article  CAS  PubMed  Google Scholar 

  10. Hall, C.N. et al. Capillary pericytes regulate cerebral blood flow in health and disease. Nature 508, 55–60 (2014).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  11. Fernández-Klett, F., Offenhauser, N., Dirnagl, U., Priller, J. & Lindauer, U. Pericytes in capillaries are contractile in vivo, but arterioles mediate functional hyperemia in the mouse brain. Proc. Natl. Acad. Sci. USA 107, 22290–22295 (2010).

    Article  PubMed  PubMed Central  Google Scholar 

  12. Yemisci, M. et al. Pericyte contraction induced by oxidative-nitrative stress impairs capillary reflow despite successful opening of an occluded cerebral artery. Nat. Med. 15, 1031–1037 (2009).

    Article  CAS  PubMed  Google Scholar 

  13. Hartmann, D.A. et al. Pericyte structure and distribution in the cerebral cortex revealed by high-resolution imaging of transgenic mice. Neurophotonics 2, 041402 (2015).

    Article  PubMed  PubMed Central  Google Scholar 

  14. Wei, H.S. et al. Erythrocytes are oxygen-sensing regulators of the cerebral microcirculation. Neuron 91, 851–862 (2016).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  15. Vates, G.E., Takano, T., Zlokovic, B. & Nedergaard, M. Pericyte constriction after stroke: the jury is still out. Nat. Med. 16, 959–960 (2010).

    Article  CAS  PubMed  Google Scholar 

  16. Sweeney, M.D., Ayyadurai, S. & Zlokovic, B.V. Pericytes of the neurovascular unit: key functions and signaling pathways. Nat. Neurosci. 19, 771–783 (2016).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  17. Attwell, D., Mishra, A., Hall, C.N., O'Farrell, F.M. & Dalkara, T. What is a pericyte? J. Cereb. Blood Flow Metab. 36, 451–455 (2016).

    Article  CAS  PubMed  Google Scholar 

  18. Quinn, B., Toga, A.W., Motamed, S. & Merlic, C.A. Fluoro Nissl green: a novel fluorescent counterstain for neuroanatomy. Neurosci. Lett. 184, 169–172 (1995).

    Article  CAS  PubMed  Google Scholar 

  19. Nimmerjahn, A., Kirchhoff, F., Kerr, J.N.D. & Helmchen, F. Sulforhodamine 101 as a specific marker of astroglia in the neocortex in vivo. Nat. Methods 1, 31–37 (2004).

    Article  CAS  PubMed  Google Scholar 

  20. Hill, R.A. & Grutzendler, J. In vivo imaging of oligodendrocytes with sulforhodamine 101. Nat. Methods 11, 1081–1082 (2014).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  21. Cuttler, A.S. et al. Characterization of Pdgfrb-Cre transgenic mice reveals reduction of ROSA26 reporter activity in remodeling arteries. Genesis 49, 673–680 (2011).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  22. Zhu, X., Bergles, D.E. & Nishiyama, A. NG2 cells generate both oligodendrocytes and gray matter astrocytes. Development 135, 145–157 (2008).

    Article  CAS  PubMed  Google Scholar 

  23. Zhu, X. et al. Age-dependent fate and lineage restriction of single NG2 cells. Development 138, 745–753 (2011).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  24. Meisslitzer-Ruppitsch, C., Röhrl, C., Neumüller, J., Pavelka, M. & Ellinger, A. Photooxidation technology for correlated light and electron microscopy. J. Microsc. 235, 322–335 (2009).

    Article  CAS  PubMed  Google Scholar 

  25. Meiblitzer-Ruppitsch, C. et al. Electron microscopic visualization of fluorescent signals in cellular compartments and organelles by means of DAB-photoconversion. Histochem. Cell Biol. 130, 407–419 (2008).

    Article  PubMed  Google Scholar 

  26. Morris, A.W.J. et al. Vascular basement membranes as pathways for the passage of fluid into and out of the brain. Acta Neuropathol. 131, 725–736 (2016).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  27. Armstrong, J.J., Larina, I.V., Dickinson, M.E., Zimmer, W.E. & Hirschi, K.K. Characterization of bacterial artificial chromosome transgenic mice expressing mCherry fluorescent protein substituted for the murine smooth muscle alpha-actin gene. Genesis 48, 457–463 (2010).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  28. Shen, Z., Lu, Z., Chhatbar, P.Y., O'Herron, P. & Kara, P. An artery-specific fluorescent dye for studying neurovascular coupling. Nat. Methods 9, 273–276 (2012).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  29. Harb, R., Whiteus, C., Freitas, C. & Grutzendler, J. In vivo imaging of cerebral microvascular plasticity from birth to death. J. Cereb. Blood Flow Metab. 33, 146–156 (2013).

    Article  CAS  PubMed  Google Scholar 

  30. Gerhardt, H. & Betsholtz, C. Endothelial-pericyte interactions in angiogenesis. Cell Tissue Res. 314, 15–23 (2003).

    Article  PubMed  Google Scholar 

  31. Hughes, S. & Chan-Ling, T. Characterization of smooth muscle cell and pericyte differentiation in the rat retina in vivo. Invest. Ophthalmol. Vis. Sci. 45, 2795–2806 (2004).

    Article  PubMed  Google Scholar 

  32. Murphy, T.H., Li, P., Betts, K. & Liu, R. Two-photon imaging of stroke onset in vivo reveals that NMDA-receptor independent ischemic depolarization is the major cause of rapid reversible damage to dendrites and spines. J. Neurosci. 28, 1756–1772 (2008).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  33. Drew, P.J., Shih, A.Y. & Kleinfeld, D. Fluctuating and sensory-induced vasodynamics in rodent cortex extend arteriole capacity. Proc. Natl. Acad. Sci. USA 108, 8473–8478 (2011).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  34. Simard, M., Arcuino, G., Takano, T., Liu, Q.S. & Nedergaard, M. Signaling at the gliovascular interface. J. Neurosci. 23, 9254–9262 (2003).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  35. Borysova, L., Wray, S., Eisner, D.A. & Burdyga, T. How calcium signals in myocytes and pericytes are integrated across in situ microvascular networks and control microvascular tone. Cell Calcium 54, 163–174 (2013).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  36. Cuevas, P. et al. Pericyte endothelial gap junctions in human cerebral capillaries. Anat. Embryol. (Berl.) 170, 155–159 (1984).

    Article  CAS  Google Scholar 

  37. Bell, R.D. et al. Pericytes control key neurovascular functions and neuronal phenotype in the adult brain and during brain aging. Neuron 68, 409–427 (2010).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  38. Madisen, L. et al. A robust and high-throughput Cre reporting and characterization system for the whole mouse brain. Nat. Neurosci. 13, 133–140 (2010).

    Article  CAS  PubMed  Google Scholar 

  39. Oakley, H. et al. Intraneuronal beta-amyloid aggregates, neurodegeneration, and neuron loss in transgenic mice with five familial Alzheimer's disease mutations: potential factors in amyloid plaque formation. J. Neurosci. 26, 10129–10140 (2006).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  40. Holtmaat, A. et al. Long-term, high-resolution imaging in the mouse neocortex through a chronic cranial window. Nat. Protoc. 4, 1128–1144 (2009).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  41. Whiteus, C., Freitas, C. & Grutzendler, J. Perturbed neural activity disrupts cerebral angiogenesis during a postnatal critical period. Nature 505, 407–411 (2014).

    Article  CAS  PubMed  Google Scholar 

  42. Sano, H. et al. Study on PDGF receptor β pathway in glomerular formation in neonate mice. Ann. NY Acad. Sci. 947, 303–305 (2001).

    Article  CAS  PubMed  Google Scholar 

  43. Hill, R.A., Natsume, R., Sakimura, K. & Nishiyama, A. NG2 cells are uniformly distributed and NG2 is not required for barrel formation in the somatosensory cortex. Mol. Cell. Neurosci. 46, 689–698 (2011).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

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Acknowledgements

We thank K. Hirschi (Yale University) for sharing SMA-mCherry mice, V. Lindner (Maine Medical Center Research Institute) for sharing Pdgfrb-cre mice, A. Nishiyama (University of Connecticut) for sharing NG2-cre mice and R. Vassar (Northwestern University) for sharing 5xFAD mice. We thank X. Liu and M. Graham at the biological electron microscopy facility core (Yale School of Medicine) for assistance with sample preparation and imaging. This work was supported by the following grants from the National Institutes of Health: R21NS087511, R21NS088411, R01NS0889734 and R21AG048181 to J.G. and F32NS090820 to R.A.H.

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Authors and Affiliations

Authors

Contributions

E.C.D., R.A.H. and J.G. made the initial observation and designed all experiments. E.C.D. and R.A.H. performed the morphological, developmental and functional characterization of dye-labeled cells. L.T. conducted Alzheimer's mouse model characterization and prepared tissue for electron microscopy. K.N.M. performed fixed tissue quantification and surgeries for carotid occlusion experiments. R.A.H. and J.G. wrote the manuscript with input from all authors. J.G. supervised the study.

Corresponding author

Correspondence to Jaime Grutzendler.

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Competing interests

The authors declare no competing financial interests.

Integrated supplementary information

Supplementary Figure 1 Pdgfrb-cre:Tomato transgenic mice exhibit complete labeling of vascular mural cells that are colabeled with Pdgfrb and NG2 antibodies.

a) Confocal fluorescence images captured from the cortex of Pdgfrb-cre:Tomato transgenic mice stained with an antibody against Pdgfrb (Pdgfrb Ab) showing complete overlap between Tomato expressing mural cells (arrowheads) and antibody staining.

(b) Confocal fluorescence images captured from the cortex of Pdgfrb-cre:Tomato transgenic mice stained with an antibody against NG2 (NG2 Ab) showing expected NG2 expression by mural cells (arrowheads) and also by NG2-glia and processes in the parenchyma (arrows).

Supplementary Figure 2 NeuroTrace-labeled pericytes are embedded in the basal lamina.

(a) Confocal fluorescence images captured from the cortex of Pdgfrb-cre:Tomato transgenic mice stained with collagen IV antibody showing detection of the double layer of the basal lamina completely surrounding capillary pericyte previously labeled with NeuroTrace dye. Single pericytes labeled with NeuroTrace and Tomato were imaged immediately after tissue sectioning but before immunostaining and then reimaged after immunostaining for collagen IV confirming that NeuroTrace labels capillary pericytes (n=11 cells). Top panel is the same cell shown in Figure 4c top only a single z plane. All images are single z-plane.

Supplementary Figure 3 Intracerebral injection results in rapid, exclusive labeling of capillary pericytes

(a-b) Schematic, in vivo images and time-lapse sequence showing intracerebral injection of NeuroTrace resulting in exclusive pericyte labeling minutes after dye injection (arrows). Location of injection site is indicated by drawing of the glass micropipette within the image.

(c) NeuroTrace fluorescence intensity measurements during intracerebral injection of NeuroTrace dye at 4 regions of interest (ROIs) showing specific targeting of capillary pericytes indicated by ROIs 2 and 4.

Supplementary Figure 4 Microvascular pathology during cerebral ischemia

(a) Schematic showing timeline and approach for in vivo imaging during transient cerebral ischemia.

(b-d) In vivo time-lapse sequences captured from the cerebral cortex showing collapse and reperfusion of SMC-covered (arrows) (SMA-mCherry+) but no change in diameter in pericyte-covered (NeuroTrace+) vessels.

(e) Percent changes in diameter from baseline in SMC and pericyte covered vessels showing significant vessel collapse/constriction during ischemia only on SMC-covered vessels (pericyte covered: 28 vessel locations, SMC covered: 23 vessel locations from n=3 mice, unpaired two-tailed student’s t-test p values as indicated during: t=6.244279 df=4, after: t=1.104133 df=4).

Supplementary information

Supplementary Text and Figures

Supplementary Figures 1–4 (PDF 1007 kb)

Supplementary Methods Checklist (PDF 397 kb)

NeuroTrace labeling in the live mouse cortex.

Video shows a z-stack of NeuroTrace labeling in the cortex of a live mouse with intravascular dye used to visualize the cortical blood vessels. Depth into the cortex is indicated in upper right corner, with NeuroTrace labeling reaching up to 400 μm into the tissue. (MP4 6873 kb)

Exclusive pericyte labeling after intracerebral NeuroTrace injection.

Video shows an in vivo time-lapse sequence captured during consecutive injections of NeuroTrace into the cerebral cortex, showing exclusive labeling of pericytes within minutes after parenchymal injection. Injections are indicated as green rectangles in upper right corner and time is indicated in seconds. (MP4 26634 kb)

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Damisah, E., Hill, R., Tong, L. et al. A fluoro-Nissl dye identifies pericytes as distinct vascular mural cells during in vivo brain imaging. Nat Neurosci 20, 1023–1032 (2017). https://doi.org/10.1038/nn.4564

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