Abstract
Copper-based catalysts play a pivotal role in many industrial processes and hold a great promise for electrocatalytic CO2 reduction reaction into valuable chemicals and fuels. Towards the rational design of catalysts, the growing demand on theoretical study is seriously at odds with the low accuracy of the most widely used functionals of generalized gradient approximation. Here, we present results using a hybrid scheme that combines the doubly hybrid XYG3 functional and the periodic generalized gradient approximation, whose accuracy is validated against an experimental set on copper surfaces. A near chemical accuracy is established for this set, which, in turn, leads to a substantial improvement for the calculated equilibrium and onset potentials as against the experimental values for CO2 reduction to CO on Cu(111) and Cu(100) electrodes. We anticipate that the easy use of the hybrid scheme will boost the predictive power for accurate descriptions of molecule-surface interactions in heterogeneous catalysis.
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Introduction
Copper is a major component in several important industrial catalysts, such as those for the water–gas shift reaction1, and methanol synthesis from the synthesis gas mixture2,3,4, etc. It has recently emerged as a key ingredient in some high-potential electrocatalysts for the CO2 reduction reaction (CO2RR) to produce valuable fuels and chemicals5,6,7,8,9. In building up these processes, the first-principles calculations play a key role in understanding the mechanisms and achieving the catalyst’s rational design5,9,10,11,12.
Density functional theory (DFT) has been the method of choice for quantitative understanding and developing of complex systems in either quantum chemistry or computational materials science. Often, hybrid functionals are widely used for molecules and solids with localized electrons, while generalized-gradient approximations (GGAs) usually suffice for bulk and surface metals with delocalized electrons13,14,15. However, the choice is not trivial when dealing with systems as in heterogeneous catalysis where molecules meet metal surfaces, both of which ought to be simulated accurately.
For metal-surface catalysis, the targets are to break some old bonds in the reactant molecules and to form some new bonds in the product molecules, where the metal surface temporarily stabilizes the intermediate molecular fragments, thus catalyzing the whole process (Fig. 1a). By employing a Born–Haber cycle (Fig. 1b), the gas-phase reaction (green) and the surface reaction (black) are connected by the processes of adsorption and desorption (blue). The formation energy of a surface species, which quantifies both the internal stability of the molecular fragment and the external stability due to the presence of the metal surface, constitutes the free energy profile and determines the catalytic kinetics on the surface11,16,17,18. The formation energy of a surface species can also be decomposed into two contributions. One is the formation energy of the corresponding molecular fragment in the gas phase, while the other is the adsorption energy of this molecular fragment to the extended surface. This illustrates that accurate descriptions of both the molecular and the extended systems are essential for an accurate description of metal-surface catalysis.
However, most theoretical approaches to study metal-surface catalysis are based on GGAs, which are known to perform poorly in the prediction of reaction energies and reaction barriers in the gas phase19,20,21,22. Such errors in the gas phase will be carried over to the description of the surface processes, although some errors will be luckily canceled out to some extent in certain circumstances. It is well-known that some widely used GGAs predict incorrectly the preferred CO adsorption sites on many metal surfaces23, whereas the adsorbed CO, denoted as *CO where * indicates a surface site, is a key intermediate involved in many catalytic processes. Grand effort has been devoted to improving the accuracy in the calculations of metal-surface catalysis. Some semiempirical methods22 have been proposed at the low-rung levels of Jacob’s ladder for density functional approximations (DFAs). For instance, the specific reaction parameter (SRP) approach has achieved chemically accurate descriptions of sticking parameters in many molecule–metal-surface systems24,25, while a semiempirical method to correct the GGAs-based errors in the gas-phase reactions shows a substantial improvement of the calculated equilibrium and onset potentials for CO2RR to CO on Au, Ag, and Cu electrodes22. Besides, the random phase approximation (RPA) standing on the top rung of the Jacob’s ladder for DFAs has been utilized for accurate descriptions of metal-surface catalysis26,27,28. The embedded high-level correlated wavefunction methods have also been employed for describing both the ground state and the excited state metal surface reactions9,29,30. Noteworthily, it has also been shown that the doubly hybrid approximations, e.g., XYG3 and XYGJ-OS19,31,32, can achieve good accuracy for molecules19,20, the extended semiconductors and insulators21, as well as metal-ligand bondings33, while their performance for describing molecule–metal-surface interactions still await to be explored.
Here, we apply a hybrid scheme, XYG3:GGA, that combines the XYG3 functional19,32 and the periodic GGA, to describe some key steps in the copper-based heterogeneous catalysis. The accuracy of XYG3:GGA is validated by a benchmark set, where accurate experimental results are available, which includes (1) the preferred CO adsorption sites on Cu(111) and Cu(100) surfaces, (2) the adsorption energies of CO, H, and O on the Cu(111) surface, and that of NH3 on the Cu(100) surface, (3) the H2 dissociation barrier and the 2 *H desorption barriers on the Cu(111) surface. The benchmark results show that the XYG3:GGA scheme provides a prediction close to chemical accuracy for all these well-established cases. Finally, we utilize the XYG3:GGA scheme to study the electrocatalytic CO2RR to CO on Cu(111) and Cu(100) surfaces. A substantial improvement on the calculated equilibrium and onset potentials is achieved. Taken together, we conclude that the very high accuracy of the XYG3:GGA scheme, as well as its easy use, will enhance the predictive power of the computational catalysis for the copper-based catalysts, which shall offer new mechanistic insights and help catalysts rational design in a quantitative way.
Results and discussion
To obtain the reaction energy and the reaction barrier of a surface elementary reaction (Fig. 1b), we calculate the formation energy \(\varDelta {E}_{{{{{{{\rm{S}}}}}}}^{\ast }}^{{{{{{\rm{f}}}}}}}\) of surface species S* by
which applies to either an intermediate or a transition state (TS). The formation energy of a surface species in the gas phase, i.e., \(\varDelta {E}_{{{{{{\rm{S}}}}}}({{{{{\rm{g}}}}}})}^{{{{{{\rm{f}}}}}}}\), can be calculated easily at a high-level method, such as XYG3, or even the gold standard CCSD(T), i.e., coupled cluster with single–double and perturbative triple substitutions. The key is how to calculate the adsorption energy \(\varDelta {E}_{{{{{{{\rm{S}}}}}}}^{\ast }}^{{{{{{\rm{ad}}}}}}}\) accurately, which is realized by means of the method called XO-PBC34, as illustrated in Fig. 2.
XO35 is an extension of the well-established “our own n-layered integrated molecular orbital method” (ONIOM36) by further allowing the overlapping via a fragmentation scheme, where computation algorithms for energies, gradients, and Hessians are all available. The recent XO-PBC method34 goes beyond the standard XO by applying the periodic boundary condition (PBC) in order to deal with extended systems. Here, it is convenient to first carry out an efficient PBC calculation as the basic low level (PBC@L), taking into account the delocalization effects of the extended metal surface, which is then updated to the target high level by embedding the cluster calculation (Cluster@H) into the periodic environment (Fig. 2a). XO in its simplest version used here is comparable to many other embedding approaches28,36,37,38,39,40.
According to the XO-PBC scheme34, the final total energy is then given by
Thus, the adsorption energy ΔEad is calculated as
In particular, we adopt the PBE functional41 as the low level, where dispersion contributions are accounted for by using the GGA + D method with the Becke–Jonson (BJ42,43) damping. Meanwhile, the XYG3 functional is used as the target high level (more computational details can be found in the Supplementary Methods).
In principle, when the cluster is sufficiently large, the finite cluster effect will become sufficiently small, and the adsorption energy given by Eq. (3) will be sufficiently accurate34,37. However, there is an additional issue in regard to the basis set used. To make practical use of Eq. (3), we are looking for a computational scheme that is both accurate and efficient. In molecular science, the high-quality results for CCSD(T) at the complete basis set (CBS) are often approached by a CBS extrapolation from a large basis (LB) set at a low level of method (e.g., the second-order Møller–Plesset perturbation theory, MP2) augmented with the CCSD(T) calculation at a small basis (SB) set44. In fact, the electronic state of the metal surface tends to be localized due to the formation of the chemisorption bonds. In this context, we may use a similar strategy to approach the target result at the level of H/LB as
Equation (4) is first validated here for XYG3 by a set of gas-phase reactions, which are the net reactions that have been sedulously pursued in the heterogeneous catalysis (Supplementary Table 1). The results shown in Supplementary Fig. 1 clearly demonstrated that XYG3/def2-QZVP (LB) is able to predict the experimental values for reaction energies accurately, while the predictions of PBE/def2-QZVP are of poor quality (Supplementary Fig. 1a), demonstrating the infamous errors of the GGA functional for gas- phase reactions. The results of XYG3 are basis set sensitive, such that XYG3/def2-SVP (SB) show significantly large errors (Supplementary Fig. 1b). By employing Eq. (4) to combine the values of PBE/def2-QZVP, XYG3/def2-SVP, and PBE/def2-SVP, the results of XYG3/def2-QZVP can be accurately and efficiently reproduced, which can be compared favorably to the experimental values (Supplementary Fig. 1c, d).
By applying Eq. (4) to Eq. (3), the adsorption energy is now calculated by
where the basis sets are specified. The PBC@GGA calculation is carried out by the projector augmented-wave (PAW) basis with a high kinetic energy cutoff (see Supplementary Methods for details), which is known to well represent the LB45. Here, the energy difference between XYG3 and GGA for cluster model calculations are effectively carried out by using the SB of def2-SVP, which enables to efficiently simulate metal clusters with sufficiently large size as Cu31 (Fig. 2b) and Cu31 (Fig. 2c) for Cu(111) and Cu(100) surfaces, respectively. It has been demonstrated before that the energy difference between H and L converge well with cluster size of appropriate shapes37. Here, we refer to Supplementary Fig. 2 for illustrative testing on the cluster size effects for CO adsorption on Cu(111) and Cu(100) surfaces. It is worthy of note that the convergence of the cluster size effect for different metals is not necessarily the same (see Supplementary Fig. 3 for CO adsorption on Au(111) as a comparison). Inspection of the cluster size effect is important for achieving reliable results with the hybrid scheme.
In the following, the accuracy of the current XYG3:GGA scheme by using Eq. (5) will be demonstrated by several benchmark cases, where accurate experimental results are available as summarized in Supplementary Table 2. Besides those for GGAs of PBE and PBE-D3BJ, the performances of several widely used DFAs (i.e., M06-L23, B3LYP, B3LYP-D3BJ) are also examined, representing the effects to update the GGAs to meta-GGA, and hybrid GGAs to doubly hybrid XYG3 as the high-level method ascending the Jacob’s ladder.
Preferred CO adsorption sites
Even though CO interactions with Cu surfaces are of particular interest, there exists a large gap between the experimental observation and the theoretical prediction. While the experiment observed that CO preferred the top site on the Cu(111) surface, previous theoretical calculations showed various possibilities, depending critically on the methods used23,26,37,38,39,46.
Most GGAs predicted a strong preference of the hollow site23,26,37,38,39, while meta-GGAs predicted a weak preference of the hollow site23. Hybrid functionals predicted either a weak38,39 or a strong37 top site preference depending on the functional used, while RPA26,39 and an embedded configuration interaction (ECI) theory46 predicted a strong top site preference. Thus, it seems that the theoretical results are in better agreement with the experimental result, as the functionals ascend Jacob’s ladder. Furthermore, it was emphasized that RPA and ECI may differ qualitatively, as ECI predicted a positive adsorption energy on the hollow site46, which was believed to be inconsistent with the experimental observation where CO was found to adsorb on the hollow site at a high CO coverage39. Hence, in addition to the absolute adsorption energy on the top site, the adsorption energy difference between the top and the hollow sites is also an important metric to benchmark the computational methods.
Figure 3a presents the CO adsorption energy differences for ΔEad,top – ΔEad,bri, ΔEad,top – ΔEad,fcc, and ΔEad,top – ΔEad,hcp, which indicate the CO adsorption preference on the top site over the other sites (i.e., the bri site, and the fcc or hcp hollow site, bri = bridge, fcc = face-centered cubic, hcp = hexagonal close packed) using different functionals. As seen from the calculated data in Supplementary Table 3, the present M06-L:PBE-D3BJ scheme yields very similar adsorption energies as compared to those from the previous periodic M06-L calculations23, where the corresponding adsorption energies are (−0.71 eV vs −0.65 eV23) on the top site and (−0.75 eV vs −0.70 eV23) on the fcc hollow site, respectively. This good agreement demonstrates the reliability and usefulness of the present hybrid scheme, which is more cost-effective than the direct PBC calculation using higher rung functionals34. In consistency with the previous theoretical works23,26,37,38,39, our results also show that GGAs predict a strong hollow site preference (i.e., with a positive energy difference of ΔEad,top – ΔEad,fcc ≈ 0.1 eV), while meta-GGA predicts a weak hollow site preference (ΔEad,top – ΔEad,fcc ≈ 0.04 eV).
We see a hierarchy of improved performance such that hybrid and doubly hybrid functionals predict a strong top site preference (i.e., with a negative energy difference). Nevertheless, B3LYP predicts a positive adsorption energy on the fcc site (Supplementary Table 3), which was considered unreasonable39. B3LYP-D3BJ improves the prediction on the absolute adsorption energies, whereas it may still have predicted a too large difference between the top and the hollow sites (ΔEad,top – ΔEad,fcc ≈ −0.43 eV). Noteworthily, XYG3 predicts that the adsorption energy on the fcc site is 0.12 eV weaker than that on the top site, which can be compared favorably to the RPA results of 0.10 eV26 or 0.22 eV39 (see the horizontal bar in light blue in Fig. 3a).
The common model describing CO adsorption invokes interactions of the two CO frontier orbitals, the highest occupied molecular orbital (HOMO) 5σ and the lowest unoccupied molecular orbital (LUMO) 2π*, with the metal states47. It is well-known that GGAs over-stabilize 2π* and de-stabilize 5σ (Supplementary Table 4), due to the infamous delocalization error48 for violating the Perdew–Parr–Levy–Balduz (PPLB) linearity condition49 (Supplementary Fig. 4). While 2π* prefers the metal-surface bonding in the hollow/bridge sites, 5σ prefers the metal-surface bonding in the top site. Conceivably, it is because that the former wins over the latter, resulting in an erroneous site preference by the low-rung functionals50. While Supplementary Fig. 4 demonstrates that the PPLB linearity condition is largely fulfilled by XYG3, such that the 5σ and 2π* orbital levels are nicely reproduced (Supplementary Table 4). XYG3 diminishes the notorious delocalization error, leading to a general improvement as also shown below.
Adsorption energies
We now pay more attention to the performance of the XYG3:GGA scheme and some other methods in describing the absolute adsorption energies (Supplementary Table 5). It is worth noting that the benchmark values should consider the vibrational zero-point energy (ZPE) contribution contained in the low-temperature experimental surface reaction energy51. This approach has also been employed here to consider the ZPE contributions to all the experimental values (see Supplementary Methods 1.2 and Supplementary Table 2 for details). The performances of some selected DFAs on calculating the adsorption energies of CO, H, and O on the Cu(111) surface, as well as the NH3 adsorption energy on the Cu(100) surface, are tested, while the calculation errors of different functionals are presented in Fig. 3b.
For CO adsorption on the Cu(111) surface, we compare the calculated values for the on-top molecular adsorption with the experimental value (Supplementary Table 5). The PBE-predicted value is −0.75 eV, which indicates a too-strong adsorption as compared to the experimental value of −0.59 eV51. Adding the D3BJ dispersion correction to PBE leads to an adsorption energy of −0.99 eV, further departing from the reference. M06-L performs reasonably well, yielding adsorption energy of −0.71 eV. While B3LYP-predicted CO adsorption is too weak (−0.27 eV), its dispersion correction with D3BJ helps considerably (−0.69 eV). Among the selected functionals, XYG3 gives the best performance, predicting adsorption energy of −0.63 eV, which is closer to the experimental value of −0.59 eV51 than are the RPA results of −0.37 eV39 and −0.42 eV26, respectively.
Supplementary Table 5 also summarizes the other results for NH3 molecular adsorption and H2 and O2 dissociative adsorption. The results clearly demonstrate the excellent performance of XYG3 in describing the adsorption behaviors on the copper surfaces. The mean absolute derivation (MAD) for XYG3 is 0.06 eV, which is close to the chemical accuracy of 0.04 eV. On the other hand, we do not, in general, find a hierarchy of improvement from GGA (e.g., PBE) to meta-GGA (e.g., M06-L) to hybrid-GGA (e.g., B3LYP), and from without the dispersion correction to with the dispersion correction (e.g., PBE vs PBE-D3BJ and B3LYP vs B3LYP-D3BJ) for data in Supplementary Table 5. The poor predictions for the HOMO/LUMO of the adsorbate molecules are general for the commonly used DFT methods, while these frontier orbitals play an important role in forming the adsorption bonds. The delocalization error can be particularly severe due to the high electronegativity of O, which, in turn, leads to a high degree of charge transfer during O adsorption. This provides a plausible explanation why errors for O adsorption energies on the metal surfaces are so large for other methods that suffer from the delocalization error.
Very recently, the experimental adsorption energy of the HCOO· radical bonded to the clean Cu(111) surface has been reported52, which provides an important benchmark for validating the accuracy of computational methods (Fig. 3c). The results show that only XYG3 can accurately predict the experimental adsorption energy of the bidentate formate, while most other functionals show very large errors. Considering the good performance on describing the bidentate formate, we suggest that the adsorption energy of monodentate formate predicted by XYG3 could be used as a useful reference, which is difficult to be determined by the experiment. Since both bidentate and monodentate formates are key intermediates in many catalytic processes, such as water–gas shift reaction1,53 and methanol synthesis2,3,4, the errors as large as 0.43–0.74 eV for GGAs could lead to a high risk of misunderstanding for the mechanisms.
Hydrogen activation and desorption barriers
We also test the performance of the XYG3:GGA scheme in describing the kinetic barriers by employing the hydrogen dissociative adsorption and the corresponding desorption on the Cu(111) surface (Fig. 3d). By using the SRP approach, the experimental data for hydrogen dissociative adsorption probability on the Cu(111) surface has been well reproduced with chemical accuracy25, leading to a 0.63 eV barrier for the H2 dissociative adsorption on the bridge site. This value is considered as an indirect experimental value and is used as the reference here. On the other hand, the 2 *H desorption barrier determined by the temperature-programmed desorption (TPD) is 0.77 eV54, which corresponds to 0.84 eV after applying the ZPE contribution correction (Supplementary Table 2).
The errors for the predicted barriers with different functionals are presented in Fig. 3d. While PBE predicts a good desorption barrier, it significantly underestimates the dissociative adsorption barrier. Both PBE-D3BJ and M06-L follow the same trend as PBE, further exacerbating the problem. On the contrary, B3LYP overestimates the dissociative adsorption barrier. Such a tendency is eliminated by adding the dispersion correction as in B3LYP-D3BJ. B3LYP also overestimates the 2 *H desorption barrier to some extent, while B3LYP-D3BJ does not help in this context. Encouragingly, XYG3 can correctly predict both barriers for the H2 dissociative adsorption and the 2 *H desorption, which represents an important advance.
Interestingly, an advanced embedded multireference second-order perturbation theory (emb-MRPT2) method has also been applied to the H2/Cu(111) system, where a 0.05 eV dissociative adsorption barrier was reported and a 1.00 eV desorption barrier was obtained55. These numbers differ significantly from our reference data of 0.63 eV for the former and 0.84 eV for the latter. We tend to believe that the emb-MRPT2 barriers are less reliable, as they indicate dissociative adsorption energy of −0.95 eV for H2 on Cu(111). This overshoots the experimental H2 dissociative adsorption energies of −0.75 eV and −0.93 eV on Pt(111) and Pd(111) surfaces, respectively51, while it is well-established that H2 dissociation on Cu is much more difficult than that on Pt, Pd25,56,57, indicating that the dissociative adsorption energy for H2 on the former should be smaller in magnitude than those on the latter.
Electrocatalytic CO2 reduction on Cu(111) and Cu(100) surfaces
The overall reaction of CO2RR to CO can be expressed as
By employing the computational hydrogen electrode (CHE) method7,58 (see Supplementary Methods 1.3 for details), the chemical potential of 2(H+ + e-) at pH = 0 and U = 0 V (U stands for the electrode potential) is equal to the chemical potential of H2 under the standard condition. Here, the XYG3, PBE-D3BJ, and PBE functionals are employed, leading to the reaction free energy of Eq. (6) from CO2(g) to CO(g) calculated as 0.32 eV, 0.63 eV, and 0.63 eV, respectively. These results suggest that the predicted equilibrium potentials Ueq = −ΔGr/2e− are −0.16 V, −0.32 V, and −0.32 V, respectively. Compared to the experimental Ueq of −0.10 V5, it is clearly that the XYG3 number for Ueq is quite good, while PBE-D3BJ and PBE predict Ueq with an obvious derivation.
As shown in Fig. 1b, the XO framework provides a way to combine the best of different worlds. Thus, the gas-phase reaction (green) may be described by the gold standard CCSD(T), the surface reaction (black) may be described by a periodic method such as PBE-D3BJ, while the processes of adsorption and desorption (blue) may be described by the hybrid XYG3:GGA scheme. Figure 4, denoted as XYG3:PBE-D3BJ, actually depicts such results for CO2RR on Cu(111) and Cu(100) surfaces, where the gas-phase reaction is described with CCSD(T). The reaction free energy of Eq. (6) from CO2(g) to CO(g) is now calculated as 0.16 eV, leading to Ueq of −0.08 V, which is in close agreement with the experimental Ueq of −0.10 V5.
For CO2RR to CO, the reaction pathway is believed to proceed via CO2 hydrogenation as step 1: CO2(g) +H+ + e− + * → *COOH, followed by *CO formation as step 2: *COOH + H+ + e− → *CO + H2O(l), and *CO desorption as step 3: *CO → * + CO(g) (Fig. 4). Within the context of CHE7,58, the onset potential Uonset is given by the largest positive consecutive difference for step 1 and step 2 (i.e., −Uonset = max(ΔG1, ΔG2)/e−), as step 3 is not electrochemical. Here the solvation effects for surface species exposed to solvent water have been considered (see more details in Supplementary Methods 1.4 and Supplementary Table 6). As shown in Fig. 4, ΔG1 determines Uonset for all cases except for that on the Cu(100) surface predicted by PBE-D3BJ. On the Cu(111) surface, the predicted Uonset are −0.63 V, −0.36 V, and −0.75 V by XYG3:PBE-D3BJ, PBE-D3BJ and PBE, respectively, vs the relative hydrogen electrode (RHE). As the experimental value of Uonset is −0.60 V vs RHE59, the deviations from the experiment are -0.03 V (XYG3:PBE-D3BJ), 0.24 V (PBE-D3BJ) and −0.15 V (PBE), respectively. Similarly, on the Cu(100) surface, the deviations from the experimental Uonset of −0.30 V vs RHE59 are −0.09 V (XYG3:PBE-D3BJ), 0.24 V (PBE-D3BJ) and 0.04 V (PBE), respectively. Thus, the predicted Uonset of XYG3:PBE-D3BJ are in excellent agreement with the experiments. While the PBE results are reasonably good, the PBE-D3BJ results show large deviations.
It is quite alarming to see that the widely used PBE-D3BJ makes a wrong prediction on the potential limiting step, mainly due to the fact that it erroneously predicts a 0.26 eV more stable COOH in the gas phase (Supplementary Table 7). This error is diminished by chance in PBE for the lack of dispersion correction, leading to a reasonably good performance. However, both PBE and PBE-D3BJ provide a wrong relative stability of intermediates on Cu(100), while PBE-D3BJ yields a highly over-binded CO (Fig. 4), leading to an unrealistic tendency of catalyst poisoning. All in all, the hybrid XYG3:PBE-D3BJ scheme accurately describe both Ueq and Uonset for CO2RR to CO on both Cu(111) and Cu(100) surfaces, overcoming the shortcomings of PBE-D3BJ and PBE. These results highlight the importance of accurate description on the gas-phase energetics in understanding heterogeneous catalysis, in addition to the energetics of surface processes (Fig. 1). Nevertheless, the gas-phase correction schemes7,22,60, which represents one step towards the accurate description of the reaction energy profile for heterogeneous catalysis, are only useful when the description of the gas-phase reaction is in serious errors, while that of the surface reaction is already satisfactory (See additional examples and discussions in Supplementary Discussion and Supplementary Figs. 6 and 7). Thus, a method both accurate for the gas-phase and surface reactions, such as XYG3:GGA scheme, is highly desired to provide an unbiased understanding and prediction on heterogeneous catalysis.
Besides the applications to CO2RR to CO, the XYG3:PBE-D3BJ scheme is also applied to the preliminary exploration of the C–C coupling on the Cu(100) surface (Supplementary Fig. 8). Until now, the potential-determining step for the C2+ production is still under debate61,62,63. To validate the potential-determining step and to predict the selectivity for C2+ production, a comprehensive characterization of the whole reaction network is required. In addition, extending the application of XYG3:PBE-D3BJ to an accurate description of surface reactions on the other coinage metals is readily available. For instance, the XYG3:PBE-D3BJ scheme can accurately predict the HCOO* decomposition barrier on the Au(110)-1×2 surface, as opposed to the PBE-D3BJ method (Supplementary Fig. 7). However, for transition metals with opened d shells, such as Pt, it remains challenging to accurately describe the related chemisorption bonds and surface reactions, while more efforts have to be taken in developing new strategies with a suitable combination of H and L levels of theory on top of a suitable cluster model for the active center.
In summary, by using a hybrid scheme that combines the doubly hybrid XYG3 functional and the periodic GGA (i.e., XYG3:GGA), accurate first-principles calculations on copper-based heterogeneous catalysis have been achieved. The accuracy of the XYG3:PBE-D3BJ scheme was demonstrated by the benchmark study that includes the CO preferred sites, adsorption energies of CO, H, O, and NH3 and activation barriers for H2 dissociative adsorption and desorption on Cu(111) or Cu(100) surfaces. When the XYG3:PBE-D3BJ scheme was applied to the electrocatalytic CO2RR to CO on Cu(111) and Cu(100) surfaces, substantial improvements over the widely used PBE-D3BJ and PBE functionals on the calculated equilibrium and onset potentials have been achieved. The XO framework, powered by efficient algorithms of energies, gradient, and Hessians, provides a way to combine the best of different worlds. We anticipate that the easy use of the hybrid H:L scheme shown here, with H = XYG3 and L = PBE-D3BJ specifically for copper-based catalysts, as well as other suitable combinations of H and L in general, will boost the predictive power of periodic models for an accurate description of molecule-surface interactions in heterogeneous catalysis, and open up new horizons for the rational design of better industrial catalysts and new electrocatalytic materials.
Methods
DFT calculations
All periodic density functional theory (DFT) calculations were performed using the Vienna ab initio simulation package (VASP)64,65. The core electrons were described by the projector augmented-wave (PAW) method. Unless otherwise stated, the kinetic energy cutoff for the plane wave basis sets of the valence electrons was set to be 450 eV. The surface Monkhorst–Pack meshes66 of 5 × 5 × 1 k-point sampling in the surface Brillouin zone were employed for all calculations. After the convergence criteria for optimizations were met, the largest remaining force on each atom was less than 0.02 eV Å‒1. The climbing image nudged-elastic band (CI-NEB) method was employed to determine the transition states67.
All adsorption energy calculations using cluster models were performed by using the Q-Chem 5.0 computational package68. All the structures of cluster models cut from extended systems were fixed. The cluster model calculations were performed with a small basis set of def2-SVP69. For calculating the formation energy of the surface species in the gas phase, the large basis set of def2-QZVP69 was used. More details and discussions can be found in the Supplementary Methods.
Thermodynamic quantity calculations
All gas-phase molecules were treated as ideal gas, whose thermodynamic quantities contain all the transitional, rotational, and vibrational contributions. All surface species were treated as an immobile model containing the vibrational contribution only. The thermodynamic quantities of the gas-phase molecules can be directly obtained from the Q-Chem calculation results with the vibrational contribution treated by the harmonic oscillator approximation. A brief introduction of partition functions also has been shown in the Supplementary Methods.
Computational hydrogen electrode model
The Gibbs free energy change (ΔG) of the proton-coupled electron transfer (PCET) step was calculated by using the computational hydrogen electrode (CHE) model7,58, which uses one-half of the chemical potential of hydrogen as the chemical potential of the proton-electron pair. According to this method7,58, the ΔG value was determined as:
where ΔH and ΔS are the enthalpy change and the entropy change, respectively. T is the absolute temperature. ΔGU is the free energy contribution related to the electrode potential U, where the effect of a bias on all states involving an electron in the electrode is included by shifting the energy of this state by −eU. ΔGpH is the concentration correction to the H+ free energy. Since the values versus the relative hydrogen electrode (RHE) were used in this work, this correction was not necessary.
Solvation model
The solvation effect was taken into account by using an implicit solvation model70,71 as implemented by the Hening group under the name VASPsol72, where a dielectric constant of 78.4 corresponds to solvent water. In addition, in the cases where there are strong interactions between the adsorbate and the water molecules, for instance, to form hydrogen bonds, it is necessary to add some explicit water molecules for a proper description of the solvation effect. Here, we suggested that explicit water molecules should be introduced, if the explicit solvation energy correction could provide additional stability for the adsorbate. More details and the suitability of our hybrid explicit–implicit solvation model can be found in the Supplementary Methods.
Data availability
The data that support the findings of this study are available from the corresponding author upon reasonable request.
References
Campbell, C. T., Koel, B. E. & Daube, K. A. Surface science studies of the water–gas shift reaction on a model Cu(111) catalyst. J. Vac. Sci. Technol. A 5, 810–813 (1987).
Behrens, M. et al. The active site of methanol synthesis over Cu/ZnO/Al2O3 industrial catalysts. Science 336, 893–897 (2012).
Graciani, J. et al. Highly active copper-ceria and copper-ceria-titania catalysts for methanol synthesis from CO2. Science 345, 546–550 (2014).
Kattel, S., Ramírez, P. J., Chen, J. G., Rodriguez, J. A. & Liu, P. Active sites for CO2 hydrogenation to methanol on Cu/ZnO catalysts. Science 355, 1296–1299 (2017).
Nitopi, S. et al. Progress and perspectives of electrochemical CO2 reduction on copper in aqueous electrolyte. Chem. Rev. 119, 7610–7672 (2019).
Birdja, Y. Y. et al. Advances and challenges in understanding the electrocatalytic conversion of carbon dioxide to fuels. Nat. Energy 4, 732–745 (2019).
Peterson, A. A., Abild-Pedersen, F., Studt, F., Rossmeisl, J. & Nørskov, J. K. How copper catalyzes the electroreduction of carbon dioxide into hydrocarbon fuels. Energy Environ. Sci. 3, 1311–1315 (2010).
Cheng, T., Xiao, H. & Goddard, W. A. 3rd Reaction mechanisms for the electrochemical reduction of CO2 to CO and formate on the Cu(100) surface at 298 K from quantum mechanics free energy calculations with explicit water. J. Am. Chem. Soc. 138, 13802–13805 (2016).
Xu, S. & Carter, E. A. Theoretical insights into heterogeneous (photo)electrochemical CO2 reduction. Chem. Rev. 119, 6631–6669 (2019).
Norskov, J. K., Bligaard, T., Rossmeisl, J. & Christensen, C. H. Towards the computational design of solid catalysts. Nat. Chem. 1, 37–46 (2009).
Motagamwala, A. H. & Dumesic, J. A. Microkinetic modeling: a tool for rational catalyst design. Chem. Rev. 121, 1049–1076 (2021).
Chen, B. W. J., Xu, L. & Mavrikakis, M. Computational methods in heterogeneous catalysis. Chem. Rev. 121, 1007–1048 (2021).
Janthon, P. et al. Bulk properties of transition metals: a challenge for the design of universal density functionals. J. Chem. Theory Comput. 10, 3832–3839 (2014).
Kurth, S., Perdew, J. P. & Blaha, P. Molecular and solid-state tests of density functional approximations: LSD, GGAs, and meta-GGAs. Int. J. Quantum Chem. 75, 89–909 (1999).
Dasgupta, S., Lambros, E., Perdew, J. P. & Paesani, F. Elevating density functional theory to chemical accuracy for water simulations through a density-corrected many-body formalism. Nat. Commun. 12, 6359 (2021).
Motagamwala, A. H. & Dumesic, J. A. Analysis of reaction schemes using maximum rates of constituent steps. Proc. Natl Acad. Sci. USA 113, E2879–E2888 (2016).
Motagamwala, A. H., Ball, M. R. & Dumesic, J. A. Microkinetic analysis and scaling relations for catalyst design. Annu. Rev. Chem. Biomol. Eng. 9, 413–450 (2018).
Chen, Z., Liu, Z. & Xu, X. Coverage-dependent microkinetics in heterogeneous catalysis powered by the maximum rate analysis. ACS Catal. 11, 9333–9344 (2021).
Zhang, Y., Xu, X. & Goddard, W. A. 3rd Doubly hybrid density functional for accurate descriptions of nonbond interactions, thermochemistry, and thermochemical kinetics. Proc. Natl Acad. Sci. USA 16, 4963–4968 (2009).
Zhang, I. Y. & Xu, X. Gas-phase thermodynamics as a validation of computational catalysis on surfaces: a case study of Fischer-Tropsch synthesis. ChemPhysChem 13, 1486–1494 (2012).
Wang, Y., Li, Y., Chen, J., Zhang, I. Y. & Xu, X. Doubly hybrid functionals close to chemical accuracy for both finite and extended systems: implementation and test of XYG3 and XYGJ-OS. JACS Au 1, 543–549 (2021).
Granda-Marulanda, L. P. et al. A semiempirical method to detect and correct DFT-based gas-phase errors and its application in electrocatalysis. ACS Catal. 10, 6900–6907 (2020).
Luo, S., Zhao, Y. & Truhlar, D. G. Improved co adsorption energies, site preferences, and surface formation energies from a meta-generalized gradient approximation exchange-correlation functional, M06-L. J. Phys. Chem. Lett. 3, 2975–2979 (2012).
Honkala, K. et al. Ammonia synthesis from first-principles calculations. Science 307, 555–558 (2005).
Diaz, C. et al. Chemically accurate simulation of a prototypical surface reaction: H2 dissociation on Cu(111). Science 326, 832–834 (2009).
Schimka, L. et al. Accurate surface and adsorption energies from many-body perturbation theory. Nat. Mater. 9, 741–744 (2010).
Tameh, M. S., Dearden, A. K. & Huang, C. Accuracy of density functional theory for predicting kinetics of methanol synthesis from CO and CO2 hydrogenation on copper. J., Phys. Chem. C. 122, 17942–17953 (2018).
Wei, Z., Goltl, F. & Sautet, P. Diffusion barriers for carbon monoxide on the Cu(001) surface using many-body perturbation theory and various density functionals. J. Chem. Theory Comput. 17, 7862–7872 (2021).
Libisch, F., Huang, C. & Carter, E. A. Embedded correlated wavefunction schemes: theory and applications. Acc. Chem. Res. 47, 2768–2775 (2014).
Zhao, Q. & Carter, E. A. Revisiting competing paths in electrochemical CO2 reduction on copper via embedded correlated wavefunction theory. J. Chem. Theory Comput. 16, 6528–6538 (2020).
Zhang, I. Y., Xu, X., Jung, Y. & Goddard, W. A. 3rd A fast doubly hybrid density functional method close to chemical accuracy using a local opposite spin ansatz. Proc. Natl Acad. Sci. USA 108, 19896–19900 (2011).
Su, N. Q. & Xu, X. Development of new density functional approximations. Annu. Rev. Phys. Chem. 68, 155–182 (2017).
Chen, Z.-N., Shen, T., Wang, Y. & Zhang, I. Y. Accurate description of catalytic selectivity: challenges and opportunities for the development of density functional approximations. CCS Chem. 3, 136–143 (2021).
Chen, B. & Xu, X. XO-PBC: An accurate and efficient method for molecular crystals. J. Chem. Theory Comput. 16, 4271–4285 (2020).
Guo, W., Wu, A., Zhang, I. Y. & Xu, X. XO: An extended oniom method for accurate and efficient modeling of large systems. J. Comput. Chem. 33, 2142–2160 (2012).
Svensson, M. et al. ONIOM: A multilayered integrated MO + MM method for geometry optimizations and single point energy predictions. A test for diels−alder reactions and Pt(P(t-Bu)3)2 + H2 oxidative addition. J. Phys. Chem. 100, 19357–19363 (1996).
Hu, Q. M., Reuter, K. & Scheffler, M. Towards an exact treatment of exchange and correlation in materials: application to the “CO adsorption puzzle” and other systems. Phys. Rev. Lett. 98, 176103 (2007).
Stroppa, A., Termentzidis, K., Paier, J., Kresse, G. & Hafner, J. CO adsorption on metal surfaces: a hybrid functional study with plane-wave basis set. Phys. Rev. B 76, 195440 (2007).
Ren, X., Rinke, P. & Scheffler, M. Exploring the random phase approximation: application to CO adsorbed on Cu(111). Phys. Rev. B 80, 045402 (2009).
Sauer, J. Ab initio calculations for molecule-surface interactions with chemical accuracy. Acc. Chem. Res. 52, 3502–3510 (2019).
Perdew, J. P., Burke, K. & Ernzerhof, M. Generalized gradient approximation made simple. Phys. Rev. Lett. 77, 3865–3868 (1996).
Grimme, S., Antony, J., Ehrlich, S. & Krieg, H. A consistent and accurate ab initio parametrization of density functional dispersion correction (DFT-D) for the 94 elements H-Pu. J. Chem. Phys. 132, 154104 (2010).
Grimme, S., Ehrlich, S. & Goerigk, L. Effect of the damping function in dispersion corrected density functional theory. J. Comput. Chem. 32, 1456–1465 (2011).
Temelso, B., Renner, C. R. & Shields, G. C. Importance and reliability of small basis set CCSD(T) corrections to MP2 binding and relative energies of water clusters. J. Chem. Theory Comput. 11, 1439–1448 (2015).
Tosoni, S., Tuma, C., Sauer, J., Civalleri, B. & Ugliengo, P. A comparison between plane wave and gaussian-type orbital basis sets for hydrogen bonded systems: formic acid as a test case. J. Chem. Phys. 127, 154102 (2007).
Sharifzadeh, S., Huang, P. & Carter, E. Embedded configuration interaction description of co on Cu(111): resolution of the site preference conundrum. J. Phys. Chem. C. 112, 4649–4657 (2008).
Hammer, B., Morikawa, Y. & Nørskov, J. K. CO chemisorption at metal surfaces and overlayers. Phys. Rev. Lett. 76, 2141–2144 (1996).
Mori-Sanchez, P., Cohen, A. J. & Yang, W. Localization and delocalization errors in density functional theory and implications for band-gap prediction. Phys. Rev. Lett. 100, 146401 (2008).
Perdew, J. P., Parr, R. G., Levy, M. & Balduz, J. L. Density-functional theory for fractional particle number: derivative discontinuities of the energy. Phys. Rev. Lett. 49, 1691–1694 (1982).
Mason, S. E., Grinberg, I. & Rappe, A. M. First-principles extrapolation method for accurate CO adsorption energies on metal surfaces. Phys. Rev. B 69, 161401 (2004).
Wellendorff, J. et al. A benchmark database for adsorption bond energies to transition metal surfaces and comparison to selected DFT functionals. Surf. Sci. 640, 36–44 (2015).
Ruehl, G., Harman, S. E., Gluth, O. M., LaVoy, D. H. & Campbell, C. T. Energetics of adsorbed formate and formic acid on Cu(111) by calorimetry. ACS Catal. 12, 10950–10960 (2022).
Gokhale, A. A., Dumesic, J. A. & Mavrikakis, M. On the mechanism of low-temperature water gas shift reaction on copper. J. Am. Chem. Soc. 130, 1402–1414 (2008).
Cao, K., Fuchsel, G., Kleyn, A. W. & Juurlink, L. B. F. Hydrogen adsorption and desorption from Cu(111) and Cu(211). Phys. Chem. Chem. Phys. 20, 22477–22488 (2018).
Zhao, Q., Zhang, X., Martirez, J. M. P. & Carter, E. A. Benchmarking an embedded adaptive sampling configuration interaction method for surface reactions: H2 desorption from and CH4 dissociation on Cu(111). J. Chem. Theory Comput. 16, 7078–7088 (2020).
Luntz, A. C., Brown, J. K. & Williams, M. D. Molecular beam studies of H2 and D2 dissociative chemisorption on pt(111). J. Chem. Phys. 93, 5240–5246 (1990).
Darby, M. T., Stamatakis, M., Michaelides, A. & Sykes, E. C. H. Lonely atoms with special gifts: Breaking linear scaling relationships in heterogeneous catalysis with single-atom alloys. J. Phys. Chem. Lett. 9, 5636–5646 (2018).
Nørskov, J. K. et al. Origin of the overpotential for oxygen reduction at a fuel-cell cathode. J. Phys. Chem. B 108, 17886–17892 (2004).
Huang, Y., Handoko, A. D., Hirunsit, P. & Yeo, B. S. Electrochemical reduction of CO2 using copper single-crystal surfaces: effects of CO* coverage on the selective formation of ethylene. ACS Catal. 7, 1749–1756 (2017).
Studt, F. et al. The mechanism of CO and CO2 hydrogenation to methanol over Cu‐based catalysts. ChemCatChem 7, 1105–1111 (2015).
Calle-Vallejo, F. & Koper, M. T. Theoretical considerations on the electroreduction of CO to C2 species on Cu(100) electrodes. Angew. Chem. Int. Ed. 52, 7282–7285 (2013).
Liu, X. et al. pH effects on the electrochemical reduction of CO(2) towards C2 products on stepped copper. Nat. Commun. 10, 32 (2019).
Peng, H. et al. The role of atomic carbon in directing electrochemical CO(2) reduction to multicarbon products. Energy Environ. Sci. 14, 473–482 (2021).
Kresse, G. & Hafner, J. Ab initio molecular dynamics for open-shell transition metals. Phys. Rev. B 48, 13115–13118 (1993).
Kresse, G. & Furthmüller, J. Efficient iterative schemes for ab initio total-energy calculations using a plane-wave basis set. Phys. Rev. B 54, 11169–11186 (1996).
Monkhorst, H. J. & Pack, J. D. Special points for Brillouin-zone integrations. Phys. Rev. B 13, 5188–5192 (1976).
Henkelman, G., Uberuaga, B. P. & Jónsson, H. A climbing image nudged elastic band method for finding saddle points and minimum energy paths. J. Chem. Phys. 113, 9901–9904 (2000).
Shao, Y. et al. Advances in molecular quantum chemistry contained in the Q-Chem 4.0 program package. Mol. Phys. 113, 184–215 (2014).
Weigend, F. & Ahlrichs, R. Balanced basis sets of split valence, triple zeta valence and quadruple zeta valence quality for H to Rn: design and assessment of accuracy. Phys. Chem. Chem. Phys. 7, 3297–3305 (2005).
Letchworth-Weaver, K. & Arias, T. A. Joint density functional theory of the electrode-electrolyte interface: Application to fixed electrode potentials, interfacial capacitances, and potentials of zero charge. Phys. Rev. B 86, 075140 (2012).
Gunceler, D., Letchworth-Weaver, K., Sundararaman, R., Schwarz, K. A. & Arias, T. A. The importance of nonlinear fluid response in joint density-functional theory studies of battery systems. Modell. Simul. Mater. Sci. Eng. 21, 074005 (2013).
Mathew, K., Sundararaman, R., Letchworth-Weaver, K., Arias, T. A. & Hennig, R. G. Implicit solvation model for density-functional study of nanocrystal surfaces and reaction pathways. J. Chem. Phys. 140, 084106 (2014).
Acknowledgements
We appreciate the support from the National Natural Science Foundation of China (Grant 22233002, 21991130 (X.X.), 22103014 (Z.C.)), the National Key Research and Development Program of China (Grant 2018YFA0208600 (X.X.), 2022YFA1504402 (Z.C.)) and Innovation Program for Quantum Science and Technology (2021ZD0303305 (X.X.)).
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X.X. proposed, designed, and supervised the project. X.X., Z.C., and Z.L. wrote the manuscript. Z.C. and Z.L. performed the theoretical calculations. All the authors discussed, commented, and revised the manuscript.
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Chen, Z., Liu, Z. & Xu, X. Accurate descriptions of molecule-surface interactions in electrocatalytic CO2 reduction on the copper surfaces. Nat Commun 14, 936 (2023). https://doi.org/10.1038/s41467-023-36695-7
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DOI: https://doi.org/10.1038/s41467-023-36695-7
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