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| Open AccessEarly cellular events and potential regulators of cellulase induction in Penicillium janthinellum NCIM 1366
- Meera Christopher
- , AthiraRaj Sreeja-Raju
- & Rajeev K. Sukumaran
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| Open AccessDynamic changes in Shiga toxin (Stx) 1 transducing phage throughout the evolution of O26:H11 Stx-producing Escherichia coli
- Bungo Yano
- , Itsuki Taniguchi
- & Keiji Nakamura
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| Open AccessWhole genome sequence-based characterisation of Shiga toxin-producing Escherichia coli isolated from game meat originating from several European countries
- Magdalena Nüesch-Inderbinen
- , Andrea Treier
- & Roger Stephan
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| Open AccessEffect of in vitro cultivation on human gut microbiota composition using 16S rDNA amplicon sequencing and metabolomics approach
- Paulina Średnicka
- , Marek Łukasz Roszko
- & Edyta Juszczuk-Kubiak
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| Open AccessPortable and cost-effective genetic detection and characterization of Plasmodium falciparum hrp2 using the MinION sequencer
- Susanna Sabin
- , Sophie Jones
- & Eldin Talundzic
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| Open AccessAcrAB efflux pump impacts on the survival of adherent-invasive Escherichia coli strain LF82 inside macrophages
- Giulia Fanelli
- , Martina Pasqua
- & Bianca Colonna
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| Open AccessA 10-year microbiological study of Pseudomonas aeruginosa strains revealed the circulation of populations resistant to both carbapenems and quaternary ammonium compounds
- Marine Pottier
- , François Gravey
- & Simon Le Hello
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| Open AccessFactors associated with plasmid antibiotic resistance gene carriage revealed using large-scale multivariable analysis
- Alex Orlek
- , Muna F. Anjum
- & A. Sarah Walker
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| Open AccessRegulation of pseurotin A biosynthesis by GliZ and zinc in Aspergillus fumigatus
- Hyewon Seo
- , Suzie Kang
- & Cheol-Won Yun
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| Open AccessLarge-scale genomic analysis of Mycobacterium tuberculosis reveals extent of target and compensatory mutations linked to multi-drug resistant tuberculosis
- Gary Napier
- , Susana Campino
- & Taane G. Clark
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| Open AccessBreast cancer patients from the Midwest region of the United States have reduced levels of short-chain fatty acid-producing gut bacteria
- Rachel L. Shrode
- , Jessica E. Knobbe
- & Ashutosh K. Mangalam
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| Open AccessWhole genome sequence characterization of Aspergillus terreus ATCC 20541 and genome comparison of the fungi A. terreus
- Hung-Yi Wu
- , Uffe Hasbro Mortensen
- & HsinYuan Tsai
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| Open AccessSpatio-temporal patterns of Synechococcus oligotypes in Moroccan lagoonal environments
- Bouchra Chaouni
- , Abdellah Idrissi Azami
- & Hassan Ghazal
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| Open AccessStudy of 32 new phage tail-like bacteriocins (pyocins) from a clinical collection of Pseudomonas aeruginosa and of their potential use as typing markers and antimicrobial agents
- Lucía Blasco
- , Manuel González de Aledo
- & María Tomás
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| Open AccessHigher-order interactions shape microbial interactions as microbial community complexity increases
- Manon A. Morin
- , Anneliese J. Morrison
- & Rachel J. Dutton
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| Open AccessComprehensive analysis of the metabolic and genomic features of tannin-transforming Lactiplantibacillus plantarum strains
- Elena C. Pulido-Mateos
- , Jacob Lessard-Lord
- & Denis Roy
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| Open AccessMolecular surveillance of arboviruses circulation and co-infection during a large chikungunya virus outbreak in Thailand, October 2018 to February 2020
- Sarawut Khongwichit
- , Watchaporn Chuchaona
- & Yong Poovorawan
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| Open AccessExploration of the relationship between gut microbiota and fecal microRNAs in patients with major depressive disorder
- Hui-Mei Chen
- , Yu-Chu Ella Chung
- & Po-Hsiu Kuo
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| Open AccessCharacterization, genome analysis and genetic tractability studies of a new nanocellulose producing Komagataeibacter intermedius isolate
- Pietro Cannazza
- , Antti J. Rissanen
- & Rahul Mangayil
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| Open AccessAmoxicillin and thiamphenicol treatments may influence the co-selection of resistance genes in the chicken gut microbiota
- Andrea Laconi
- , Roberta Tolosi
- & Alessandra Piccirillo
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| Open AccessBacterial plasmid-associated and chromosomal proteins have fundamentally different properties in protein interaction networks
- Tim Downing
- & Alexander Rahm
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| Open AccessComparative and pangenomic analysis of the genus Streptomyces
- Hiroshi Otani
- , Daniel W. Udwary
- & Nigel J. Mouncey
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| Open AccessGenome sequence and characterization of Streptomyces phage Pablito, representing a new species within the genus Janusvirus
- Véronique Ongenae
- , Joana Azeredo
- & Dennis Claessen
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| Open AccessIncreased genetic variation of A(H3N2) virus from influenza surveillance at the end of the 2016/2017 season for Shanghai port, China
- Zilong Zhang
- , Shenwei Li
- & Zhengan Tian
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| Open AccessEstimation of the mutation rate of Mycobacterium tuberculosis in cases with recurrent tuberculosis using whole genome sequencing
- Jessica Comín
- , Alberto Cebollada
- & Sofía Samper
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| Open AccessUnravelling the DNA sequences carried by Streptomyces coelicolor membrane vesicles
- Teresa Faddetta
- , Alberto Vassallo
- & Anna Maria Puglia
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| Open AccessHigh frequency of Nichols-like strains and increased levels of macrolide resistance in Treponema pallidum in clinical samples from Buenos Aires, Argentina
- Nicolas Morando
- , Eliška Vrbová
- & María A. Pando
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| Open AccessThe evolutionary footprint of influenza A subtype H3N2 strains in Bangladesh: implication of vaccine strain selection
- Sezanur Rahman
- , Mehedi Hasan
- & Mustafizur Rahman
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| Open AccessA critical role of calcineurin in stress responses, hyphal formation, and virulence of the pathogenic fungus Trichosporon asahii
- Yasuhiko Matsumoto
- , Asami Yoshikawa
- & Takashi Sugita
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| Open AccessThe natural history and genetic diversity of Haemophilus influenzae infecting the airways of adults with cystic fibrosis
- Conrad Izydorczyk
- , Barbara J. Waddell
- & Michael D. Parkins
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| Open AccessHigh-quality metagenome-assembled genomes from proximal colonic microbiomes of synbiotic-treated korean native black pigs reveal changes in functional capacity
- Jaehoon Jung
- , Andrew W. Bugenyi
- & Jaeyoung Heo
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| Open AccessAdaptive sampling during sequencing reveals the origins of the bovine reproductive tract microbiome across reproductive stages and sexes
- Chian Teng Ong
- , Elizabeth M. Ross
- & Ala E. Tabor
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| Open AccessThe healthy equine uterus harbors a distinct core microbiome plus a rich and diverse microbiome that varies with geographical location
- G. R. Holyoak
- , H. U. Premathilake
- & U. DeSilva
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| Open AccessAge as a primary driver of the gut microbial composition and function in wild harbor seals
- A. Pacheco-Sandoval
- , A. Lago-Lestón
- & Y. Schramm
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| Open AccessA revisit to universal single-copy genes in bacterial genomes
- Saidi Wang
- , Minerva Ventolero
- & Xiaoman Li
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| Open AccessGenomic analysis of hypervirulent Klebsiella pneumoniae reveals potential genetic markers for differentiation from classical strains
- Anton Spadar
- , João Perdigão
- & Taane G. Clark
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| Open AccessA comprehensive list of the Bunyavirales replication promoters reveals a unique promoter structure in Nairoviridae differing from other virus families
- Yutaro Neriya
- , Shohei Kojima
- & Yusuke Matsumoto
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| Open AccessStaphylococcus aureus lineages associated with a free-ranging population of the fruit bat Pteropus livingstonii retained over 25 years in captivity
- Kay Fountain
- , Alberto Barbon
- & Edward J. Feil
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| Open AccessA comparison of high-throughput SARS-CoV-2 sequencing methods from nasopharyngeal samples
- Zuzana Gerber
- , Christian Daviaud
- & Jean-François Deleuze
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| Open AccessMutational induction in SARS-CoV-2 major lineages by experimental exposure to neutralising sera
- Martina Brandolini
- , Giorgio Dirani
- & Vittorio Sambri
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| Open AccessSupplementation of xylo-oligosaccharides to suckling piglets promotes the growth of fiber-degrading gut bacterial populations during the lactation and nursery periods
- Francesc González-Solé
- , David Solà-Oriol
- & José Francisco Pérez
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| Open AccessA method for increasing electroporation competence of Gram-negative clinical isolates by polymyxin B nonapeptide
- Jilong Qin
- , Yaoqin Hong
- & Makrina Totsika
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| Open AccessCharacterization of subtilosin gene in wild type Bacillus spp. and possible physiological role
- Muaaz Mutaz Alajlani
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| Open AccessEvaluation of within-host evolution of methicillin-resistant Staphylococcus aureus (MRSA) by comparing cgMLST and SNP analysis approaches
- Amaya Campillay Lagos
- , Martin Sundqvist
- & Paula Mölling
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| Open AccessThe Pseudomonas aeruginosa DksA1 protein is involved in H2O2 tolerance and within-macrophages survival and can be replaced by DksA2
- Alessandra Fortuna
- , Diletta Collalto
- & Livia Leoni
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| Open AccessEpidemiological characterization of SARS-CoV-2 variants in children over the four COVID-19 waves and correlation with clinical presentation
- Claudia Alteri
- , Rossana Scutari
- & Carlo Federico Perno
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| Open AccessCaecal microbiota composition of experimental inbred MHC-B lines infected with IBV differs according to genetics and vaccination
- Marion Borey
- , Bertrand Bed’Hom
- & Fanny Calenge
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| Open AccessMaximum depth sequencing reveals an ON/OFF replication slippage switch and apparent in vivo selection for bifidobacterial pilus expression
- Christophe Penno
- , Mary O’Connell Motherway
- & Douwe van Sinderen
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| Open AccessMetagenomic assembled plasmids of the human microbiome vary across disease cohorts
- S. R. Stockdale
- , R. S. Harrington
- & C. Hill