Featured
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Article
| Open AccessBipolar dispersal of red-snow algae
Red-snow algae are red-pigmented unicellular algae that appear seasonally on the surface of thawing snow worldwide. Here, Segawa et al. analyse nuclear ITS2 sequences from snow algae from the Arctic and Antarctica, identifying dominant phylotypes present in both poles as well as endemic organisms.
- Takahiro Segawa
- , Ryo Matsuzaki
- & Hiroshi Mori
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Article
| Open AccessUV radiation limited the expansion of cyanobacteria in early marine photic environments
The means by which planktonic cyanobacteria were able to persist through the Archean despite high fluxes of UV radiation are unclear. Here, the authors show that Fe(III)-Si rich precipitates in the Archean photic zone could have provided early planktonic cyanobacteria an effective shield against UV-C radiation.
- Aleksandra M. Mloszewska
- , Devon B. Cole
- & Kurt. O Konhauser
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Article
| Open AccessTurbulence simultaneously stimulates small- and large-scale CO2 sequestration by chain-forming diatoms in the sea
Chain-forming diatoms are key organisms in the biotic transfer of CO2 from the atmosphere to the ocean interior. Here, the authors show that turbulence stimulates and links small-scale and large scale processes from CO2 assimilation at a diatom cell level to nitrogen cycling in fast-sinking diatom aggregates.
- Johanna Bergkvist
- , Isabell Klawonn
- & Helle Ploug
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Article
| Open AccessSoil bacterial networks are less stable under drought than fungal networks
Drought conditions can alter the composition of soil microbial communities, but the effects of drought on network properties have not been tested. Here, de Vries and colleagues show that co-occurrence networks are destabilised under drought for bacteria but not fungi.
- Franciska T. de Vries
- , Rob I. Griffiths
- & Richard D. Bardgett
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Article
| Open AccessWildfire as a major driver of recent permafrost thaw in boreal peatlands
Future permafrost thaw may be underestimated unless effects of wildfire are considered. Here the authors show that wildfires in boreal permafrost peatlands influence soil temperature and seasonal thaw depth for several decades, and increase the rate of complete permafrost thaw along permafrost edges.
- Carolyn M. Gibson
- , Laura E. Chasmer
- & David Olefeldt
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Article
| Open AccessCarbon losses from deforestation and widespread degradation offset by extensive growth in African woodlands
Degradation—the loss of carbon stored in intact woodland—is very difficult to measure over large areas. Here, the authors show that carbon emissions from degradation in African woodlands greatly exceed those from deforestation, but are happening alongside widespread increases in biomass in remote areas.
- Iain M. McNicol
- , Casey M. Ryan
- & Edward T. A. Mitchard
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Article
| Open AccessDeveloping China’s Ecological Redline Policy using ecosystem services assessments for land use planning
Ecosystem services, though a prominent ecological concept, have yet to be considered in major land use policy changes. Here, the authors demonstrate how the Ecological Redline Policy implemented in Shanghai utilized ecosystem services science and stakeholder engagement.
- Yang Bai
- , Christina P. Wong
- & Qing Wang
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Article
| Open AccessA mapping framework of competition–cooperation QTLs that drive community dynamics
Genetic variation from coexisting species influences interspecific interactions in a community. Here, the authors develop a framework for identifying quantitative trait loci (QTLs) underlying community dynamics and validate the tool using data from co-culturing of two bacterial species.
- Libo Jiang
- , Xiaoqing He
- & Rongling Wu
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Article
| Open AccessBiodiversity across trophic levels drives multifunctionality in highly diverse forests
Biodiversity change can impact ecosystem functioning, though this is primarily studied at lower trophic levels. Here, Schuldt et al. find that biodiversity components other than tree species richness are particularly important, and higher trophic level diversity plays a role in multifunctionality.
- Andreas Schuldt
- , Thorsten Assmann
- & Helge Bruelheide
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Article
| Open AccessPredictable evolution towards larger brains in birds colonizing oceanic islands
Islands may impose a distinct set of selective pressures, leading to the repeated evolution of certain traits. Here, Sayol et al. compare brain sizes of more than 1900 bird species in a phylogenetic context, finding a consistent trend for in situ evolution of increased brain size in island birds.
- Ferran Sayol
- , Philip A. Downing
- & Daniel Sol
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Article
| Open AccessStability criteria for complex microbial communities
Network stability is a central topic in theoretical ecology, with most work focusing on mutualistic or food web networks. Here, the authors explore the stability of microbial networks based on the consumption and exchange of resources, showing that asymmetry in crossfeeding relationships can destabilize networks.
- Stacey Butler
- & James P. O’Dwyer
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Article
| Open AccessAsymmetric migration decreases stability but increases resilience in a heterogeneous metapopulation
Asymmetrical movement among patches could affect the stability of ecological metapopulations, but this is difficult to test empirically. Here, Limdi et al. use experimental yeast metapopulations to show that asymmetric migration decreases stability but increases resilience to transient shocks.
- Anurag Limdi
- , Alfonso Pérez-Escudero
- & Jeff Gore
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Article
| Open AccessA new Middle Jurassic diplodocoid suggests an earlier dispersal and diversification of sauropod dinosaurs
Diplodocoid dinosaurs are generally thought to have been excluded from East Asia due to the fragmentation of Pangaea. Here, Xu et al. describe the new diplodocoid Lingwulong shenqi from the Jurassic of East Asia, suggesting an earlier diversification and dispersal of diplodocoids and other sauropods.
- Xing Xu
- , Paul Upchurch
- & Hongan Liu
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Article
| Open AccessDiscovery of a silicate rock-boring organism and macrobioerosion in fresh water
Macrobioerosion, the boring of rock and other hard substrates by living organisms, is used as a marker of marine paleo-environments. Here, Bolotov et al. describe a rock-boring mussel and its associated community from freshwater in Myanmar, demonstrating that macrobioerosion is a wider phenomenon.
- Ivan N. Bolotov
- , Olga V. Aksenova
- & Oleg S. Pokrovsky
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Article
| Open AccessPrioritizing phylogenetic diversity captures functional diversity unreliably
An ongoing conservation question is if we can maintain functional diversity by optimizing for preservation of phylogenetic diversity. Here, Mazel et al. show that functional diversity increases with phylogenetic diversity in some clades but not others, and thus could be a risky conservation strategy.
- Florent Mazel
- , Matthew W. Pennell
- & William D. Pearse
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Article
| Open AccessMicrobial biogeography of 925 geothermal springs in New Zealand
Power et al. catalogue the microbial biodiversity and physicochemistry of around 1000 hotsprings across New Zealand, providing insights into the ecological conditions that drive community assembly in these ecosystems.
- Jean F. Power
- , Carlo R. Carere
- & Matthew B. Stott
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Article
| Open AccessAbrupt high-latitude climate events and decoupled seasonal trends during the Eemian
The Eemian period (120 ka) is considered a past analogue for future climatic warming, yet data from the high latitudes remains sparse. Here, the authors show that in Northern Europe, the Eemian saw dramatic climatic shifts, linked to changes in Earth’s orbit and North Atlantic oceanic circulation.
- J. Sakari Salonen
- , Karin F. Helmens
- & Miska Luoto
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Article
| Open AccessAbrupt events and population synchrony in the dynamics of Bovine Tuberculosis
The disease dynamics of bovine tuberculosis have been of interest given the pathogen’s effect on wild animal and livestock health. Here, the authors show that a brief cessation of testing for bovine tuberculosis in 2001 altered the population synchrony of the disease dynamics across regions of Great Britain.
- Aristides Moustakas
- , Matthew R. Evans
- & Yannis Markonis
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Article
| Open AccessMicroscale ecology regulates particulate organic matter turnover in model marine microbial communities
Particle-attached bacteria play a key ecosystem role by degrading complex organic materials in the ocean. Here, the authors use model marine microbial communities to show that community composition and interspecies interactions can significantly slowdown the rates of particle turnover in the environment.
- Tim N. Enke
- , Gabriel E. Leventhal
- & Otto X. Cordero
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Article
| Open AccessLimits to growth of forest biomass carbon sink under climate change
The recovery of North American forests is likely to impact their capacity as a carbon sink. Here, Zhu et al. show a growth in aboveground biomass in various climate change scenarios, with these forests expected to sequester no more than 22% more carbon than current levels by the 2080s.
- Kai Zhu
- , Jian Zhang
- & Yiqi Luo
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Article
| Open AccessPredicting marsh vulnerability to sea-level rise using Holocene relative sea-level data
Quantifying the vulnerability of tidal marsh ecosystems to relative sea-level rise (RSLR) is essential if the threat is to be mitigated. Here, the authors analyze the response of Great Britain’s tidal marshes to RSLR during the Holocene and predict an almost inevitable loss of this ecosystem by 2100 under rapid RSLR scenarios.
- Benjamin P. Horton
- , Ian Shennan
- & Timothy A. Shaw
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Article
| Open AccessCollapse and rescue of cooperation in evolving dynamic networks
The evolution of cooperation depends on social structure, which may evolve in response. Here, Akçay models coevolution between cooperation and social network formation strategies, showing that coevolutionary feedbacks lead cooperation to collapse unless constrained by costs of social connections.
- Erol Akçay
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Correspondence
| Open AccessInconclusive evidence for rapid adaptive evolution
- Júlio Manuel Neto
- , Staffan Bensch
- & Bengt Hansson
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Correspondence
| Open AccessReply to ‘Inconclusive evidence for rapid adaptive evolution’
- Camilla Lo Cascio Sætre
- , Charles Coleiro
- & Fabrice Eroukhmanoff
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Article
| Open AccessIdentifying a common backbone of interactions underlying food webs from different ecosystems
The structure of ecological networks can vary dramatically, yet there may be common features across networks from different ecosystem types. Here, Bramon Mora et al. use network alignment to demonstrate that there is a common backbone of interactions underlying empirical food webs.
- Bernat Bramon Mora
- , Dominique Gravel
- & Daniel B. Stouffer
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Article
| Open AccessTaxonomic and functional diversity change is scale dependent
The evidence for and implications of biodiversity change remain widely debated. Jarzyna and Jetz demonstrate a strong and varying scale dependence of avian taxonomic and functional diversity, highlighting the importance of scale when assessing biodiversity change.
- Marta A. Jarzyna
- & Walter Jetz
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Article
| Open AccessAn antifungal polyketide associated with horizontally acquired genes supports symbiont-mediated defense in Lagria villosa beetles
Burkholderia bacteria protect the offspring of Lagria beetles against pathogens. Here, Flórez et al. identify an antifungal polyketide that is likely encoded by a horizontally acquired gene cluster on the genome of a dominant, uncultured Burkholderia symbiont of Lagria villosa.
- Laura V. Flórez
- , Kirstin Scherlach
- & Martin Kaltenpoth
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Article
| Open AccessCarbon costs and benefits of Indonesian rainforest conversion to plantations
Rainforest conversion to plantations driven by global demand for agricultural products generates high environmental costs. Here, the authors show that the high oil palm plantation production efficiency is associated with decreased carbon storage and slower organic matter cycling that affect ecosystem services.
- Thomas Guillaume
- , Martyna M. Kotowska
- & Yakov Kuzyakov
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Article
| Open AccessTransmission-clearance trade-offs indicate that dengue virulence evolution depends on epidemiological context
Theory predicts that pathogens will evolve towards intermediate virulence, yet the necessary trade-offs invoked by this theory have rarely been demonstrated empirically. Here, the authors show that dengue virus dynamics exhibit a trade-off between transmission and clearance rates.
- Rotem Ben-Shachar
- & Katia Koelle
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Article
| Open AccessOcean acidification conditions increase resilience of marine diatoms
Diatoms account for 40% of marine primary production and their sensitivity to ocean acidification could have ecosystem-wide consequences. Here, the authors developed and applied a stress test, demonstrating that resilience of diatoms increases significantly in ocean acidification conditions.
- Jacob J. Valenzuela
- , Adrián López García de Lomana
- & Nitin S. Baliga
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Article
| Open AccessDrivers of woody plant encroachment over Africa
Woody plant encroachment has important implications for habitat conservation and global carbon budgets, but its drivers require quantification. Here, Venter et al. report that encroachment is predominantly driven by human activities, changing weather conditions, fire, and herbivory.
- Z. S. Venter
- , M. D. Cramer
- & H.-J. Hawkins
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Article
| Open AccessIndividuality and convergence of the infant gut microbiota during the first year of life
Microbial colonization of the gut is a key process in infant development. Here, de Muinck and Trosvik analyze 2,684 fecal specimens sampled from 12 infants during their first year of life, providing detailed insights into the human gut colonization process.
- Eric J. de Muinck
- & Pål Trosvik
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Article
| Open AccessStrong sesquiterpene emissions from Amazonian soils
Recent measurements in the Amazon rainforest indicate missing sources of volatile organic compounds (VOCs). Here the authors show that soil microorganisms are a strong, unaccounted source of highly reactive sesquiterpenes, a class of VOCs that can regulate ozone chemistry within the forest canopy.
- E. Bourtsoukidis
- , T. Behrendt
- & J. Williams
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Article
| Open AccessEmissions mitigation opportunities for savanna countries from early dry season fire management
The management of fire season has been proposed as a climate mitigation tool but the scope and scale of this action is unclear. Here the authors use global emissions datasets to assess emissions mitigation opportunities for savanna fires, highlighting significant reduction potential in 37 countries.
- Geoffrey J. Lipsett-Moore
- , Nicholas H. Wolff
- & Edward T. Game
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Article
| Open AccessChemical warfare between leafcutter ant symbionts and a co-evolved pathogen
Acromyrmex ants cultivate fungus gardens that can be parasitized by Escovopsis sp., leading to colony collapse. Here, Heine et al. identify two secondary metabolites produced by Escovopsis that accumulate in Acromyrmex tissue, reduce behavioural defenses and suppress symbiotic Pseudonocardia bacteria.
- Daniel Heine
- , Neil A. Holmes
- & Barrie Wilkinson
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Article
| Open AccessModel structures amplify uncertainty in predicted soil carbon responses to climate change
A substantial portion of model uncertainty arises from model parameters and structures. Here, the authors show that alternative model structures with data-driven parameters project greater uncertainty in soil carbon responses to climate change than the conventional soil carbon model.
- Zheng Shi
- , Sean Crowell
- & Berrien Moore III
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Article
| Open AccessSpecies traits and network structure predict the success and impacts of pollinator invasions
The role of adaptive foraging in the threat of invasive pollinators to plant-pollinator systems is difficult to characterise. Here, Valdavinos et al. use network modelling to show the importance of foraging efficiency, diet overlap, plant species visitation, and degree of specialism in native pollinators.
- Fernanda S. Valdovinos
- , Eric L. Berlow
- & Neo D. Martinez
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Article
| Open AccessIntroduced species that overcome life history tradeoffs can cause native extinctions
Introduced species may displace ecologically similar native species, but mechanisms are still to be established. Here, Catford et al. provide theoretical evidence of how human-mediated species invasions may overcome competition-colonisation tradeoffs, leading to the local extinction of native species.
- Jane A. Catford
- , Michael Bode
- & David Tilman
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Article
| Open AccessHigh pCO2-induced exopolysaccharide-rich ballasted aggregates of planktonic cyanobacteria could explain Paleoproterozoic carbon burial
A Paleoproterozoic carbon isotope anomaly is likely linked to burial of oceanic cyanobacteria, but it is not clear how burial occurred. Here, the authors find that, under Paleoproterozoic pCO2 conditions, planktonic cyanobacteria increase exopolysaccharide production and mineralization, leading to aggregation and faster sinking.
- Nina A. Kamennaya
- , Marcin Zemla
- & Christer Jansson
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Article
| Open AccessOrganic matter loading by hippopotami causes subsidy overload resulting in downstream hypoxia and fish kills
Hypoxic (low oxygen) water conditions are generally thought to be uncommon in rivers and result from human impacts. However, Dutton and colleagues show here that waste from hippos in the Mara River contributes to frequent hypoxic events, suggesting hypoxia is a natural aspect of this system.
- Christopher L. Dutton
- , Amanda L. Subalusky
- & David M. Post
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Article
| Open AccessAsynchronous evolution of interdependent nest characters across the avian phylogeny
Nearly all bird species build nests; however, there is extensive variation in both how and where their nests are built. Here, Fang and colleagues reconstruct the evolution of nest structure, nest site and nest attachment across all extant bird families.
- Yi-Ting Fang
- , Mao-Ning Tuanmu
- & Chih-Ming Hung
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Article
| Open Access78,000-year-old record of Middle and Later Stone Age innovation in an East African tropical forest
Most of the archaeological record of the Middle to Later Stone Age transition comes from southern Africa. Here, Shipton et al. describe the new site Panga ya Saidi on the coast of Kenya that covers the last 78,000 years and shows gradual cultural and technological change in the Late Pleistocene.
- Ceri Shipton
- , Patrick Roberts
- & Nicole Boivin
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Article
| Open AccessNetworks of genetic similarity reveal non-neutral processes shape strain structure in Plasmodium falciparum
Plasmodium has evolved high genetic diversity in var genes, which encode for the major blood-stage antigen. Here, He et al. show how immune selection shapes the var gene repertoire in both simulated systems and a population in Ghana, by using neutral models and genetic similarity networks.
- Qixin He
- , Shai Pilosof
- & Mercedes Pascual
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Article
| Open AccessMacroecology and macroevolution of the latitudinal diversity gradient in ants
Multiple hypotheses have been proposed for the declining biodiversity gradient between the tropics and poles. Here, the authors compile and analyze geographic data for all ant species and large-scale phylogenies, suggesting that diversification time drives the latitudinal diversity gradient in ants.
- Evan P. Economo
- , Nitish Narula
- & Benoit Guénard
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Article
| Open AccessGut microbiomes of wild great apes fluctuate seasonally in response to diet
Microbiota composition fluctuates in response to changes in environmental and lifestyle factors. Here, Hicks et al. show that the faecal microbiota of wild gorillas and chimpanzees is temporally dynamic, with shifts that correlate with seasonal rainfall patterns and periods of high and low frugivory.
- Allison L. Hicks
- , Kerry Jo Lee
- & Brent L. Williams
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Article
| Open AccessEnvironmental fluctuations accelerate molecular evolution of thermal tolerance in a marine diatom
A better mechanistic understanding of how marine diatoms adapt to global warming is pertinent to project changes in global ocean primary production. Here, Schaum et al. show substantial phenotypic and genomic changes in Thalassiosira pseudonana during a 300-generation selection experiment in stable and fluctuating environments.
- C.-Elisa Schaum
- , A. Buckling
- & G. Yvon-Durocher
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Article
| Open AccessOxygen minimum zone cryptic sulfur cycling sustained by offshore transport of key sulfur oxidizing bacteria
The presence and activity of sulfide-oxidizing denitrifying bacteria in sulfide-poor offshore oxygen minimum zone waters remains unclear. Here, the authors combine oceanography, molecular, biogeochemical and single-cell techniques to examine their distribution, metabolic capacity, and origins.
- Cameron M. Callbeck
- , Gaute Lavik
- & Marcel M. M. Kuypers
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Article
| Open AccessPopulation size changes and selection drive patterns of parallel evolution in a host–virus system
Pathogens exert strong selection on hosts and thus may promote parallel evolution. Here, the authors find that hosts experimentally coevolving with a virus have parallel changes in population size, phenotype, and genomic regions, but accelerated divergence in genome sequence likely due to population size fluctuation.
- Jens Frickel
- , Philine G. D. Feulner
- & Lutz Becks
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Article
| Open AccessManipulation of insulin signaling phenocopies evolution of a host-associated polyphenism
The red-shouldered soapberry bug, Jadera haematoloma, is a potential model system for developmental plasticity. Here, the authors show that the reaction norm for wing polyphenism has evolved in a recently derived ecotype and identify insulin signaling as a candidate pathway underlying this adaptive change.
- Meghan M. Fawcett
- , Mary C. Parks
- & David R. Angelini
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