Abstract
In this study, we introduce a novel valency-based index, the neighborhood face index (NFI), designed to characterize the structural attributes of benzenoid hydrocarbons. To assess the practical applicability of NFI, we conducted a linear regression analysis utilizing numerous physiochemical properties associated with benzenoid hydrocarbons. Remarkably, the results revealed an extraordinary correlation exceeding 0.9991 between NFI and these properties, underscoring the robust predictive capability of the index. The NFI, identified as the best-performing descriptor, is subsequently investigated within certain infinite families of carbon nanotubes. This analysis demonstrates the index’s exceptional predictive accuracy, suggesting its potential as a versatile tool for characterizing and predicting properties across diverse molecular structures, particularly in the context of carbon nanotubes.
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Introduction
Exploring the correlation between the molecular structures and numerical attributes of biological, physical, and chemical properties across diverse compounds stands as a notable application of chemical graph theory. This has led to the introduction of qualitative structure–property relationships (QSPR) and qualitative structure-activity relationships (QSAR). Within QSPR/QSAR studies, topological indices (TIs) emerge as fundamental tools, serving as numeric graph invariants that establish connections between molecular structures and the bio-physical properties of chemical compounds1,2,3,4,5. Essentially, TIs function as transformations assigning positive real numbers to graphs. These numerical descriptors play a crucial role in investigating boiling points, melting points, bond energies, and intermolecular forces in existing compounds. Moreover, TIs contribute to predicting the physical properties of different chemical compounds under development, enabling the design of compounds with desired physio-chemical and biochemical characteristics. This streamlined approach reduces additional costs and time, addressing a significant challenge, particularly in developing countries. Extensive research has been conducted on TIs and their applications, as detailed in6,7,8,9.
Now we define some notations and preliminaries before proceeding further with the study of a specific index. In the literature, notations of vertices, edges, and faces of a planar graph are well defined. For the notions and notations not given here, we refer10 to the readers. Degree of a vertex \(\nu\) is denoted by \(d(\nu )\) while neighborhood degree is denoted by \(d_n(\nu )\). Consider a molecular graph G(V, E) of a molecular compound, where E, set of edges, represents bond among the atoms and V is set of vertices represents the atoms. Face is a region bounded by some vertices v and sum of degree of these incident to particular face is known as degree of face i.e. \(d(\pounds ) = \sum _{v \sim \pounds }d(v)\). Similarly, neighborhood degree of face is calculated by adding neighborhood degrees of all incident vertex i.e. \(d_n(\pounds ) = \sum _{v \sim \pounds }d_n(v)\). Different structure descriptors (TIs) can be evaluated by using vertices, edges or both. The vertex connectivity index RCI(G) and edge connectivity index ECI(G) were introduced by Randic11 and Estrada12 respectively as:
Nikolic and Trinajstic13 compared these indices for benzenoid hydrocarbons and model equations to predict bond energies and boiling points of hydro-benzenoid with error range of 0.8–2%. To increase the efficiency of their regression equations, Jamil et al.14 introduced a new topological index, known as the Face Index .
Motivated by the above work, we introduced a new topological index namely Neighborhood Face Index , denoted by NFI, and defined as:
which exhibit good correlation with numerous physical properties like bond energies and boiling points along-with stronger prediction ability for benzenoid hydrocarbons. Consider the two dimensional graph of perylene benzenoid graph as shown in Fig. 1 where vertices degree (black), neighbourhood degree (blue) and different internal faces (red) are mentioned. By adding the neighbourhood degree of the vertices which are adjacent to a particular face, we obtain \(d_n(\pounds _1)=38, \ d_n(\pounds _2)=50, \ d_n(\pounds _3)=38, \ d_n(\pounds _4)=38, \ d_n(\pounds _5)=38\) and the external face \(\pounds _{\infty }\) has face degree 102. Then by definition, \(NFI=\sum d_n(\pounds )=304\).
Nanotechnology is catalyzing a revolution in the 21st century, impacting various fields such as space exploration, entertainment, and communication through the creation of innovative materials and devices. Carbon nanotubes, in particular, are on the verge of replacing traditional electronic materials, aiming to construct smaller, faster, and more efficient devices and microchips. The realm of nanotechnology has seen the introduction of diverse nanostructures, including nanocages, magnetic nanochains, nanosheets, nanofibers, and quantum heterostructures. These tubular nanostructures exhibit unique mechanical properties attributed to their stiff and elastic nature15,16,17. Carbon nanotorus structures, known for their multi-layered and caged configurations, find widespread applications in electronics and magnetism18,19,20. Additionally, the extensive use of nanosheets in home appliances and industry is briefly discussed in existing literature21,22,23,24,25.
In the present study, we explore regression models involving the neighborhood face index (NFI) in conjunction with various structural parameters such as the randic index, edge connectivity index, \(\pi\)-electron energy, and boiling points of hydrobenzenoids. Precise formulas for graphene, \(C_4 C_8 (S)\), \(C_4 C_8 (R)\), and H-Naphthalenic Nanosheets are derived. The computational aspects of our work involve the use of Matlab for mathematical calculations and verifications, Maple for graphical analysis and plotting of results, and ChemSketch for drawing molecular graphs. Physio-chemical properties of benzenoid hydrocarbons are detailed in Table 1, providing exact values for neighborhood face index, randic index, edge connectivity index, \(\pi\)-electron energy, and boiling points of 21 common benzenoid hydrocarbons. Experimental values for \(\pi\)-electron energy and boiling points are extracted from previous literature26,27. Leveraging the data in Table 1, we establish regression models for the newly introduced neighborhood face index and discuss its chemical applicability.
Linear regression model between NFI, RI and ECI
The relationship between neighborhood face index and vertex connectivity index (randic index) is given in Eq. (1), while values for correlation coefficient R, adjusted squared correlation coefficient \(R^2\), standard error of estimation SEE, Fisher ratio F and number of benzenoid hydrocarbons are also mentioned. We constructed statistical graphs for these correlations in Figs. 2 and 3, which are plotted for NFI versus RI and NFI versus ECI.
\(R=0.986\); \(R^2(adjusted)=0.970\); \(SEE=0.3982\); \(F=695.844\); \(n=21\) The relationship between neighborhood face index and edge connectivity index is mentioned in following equation
\(R=0.994\); \(R^2(adjusted)=0.987\); \(SEE=0.3438\); \(F=1538.095\); \(n=21\).
Linear regression model between NFI and E
The linear regression models between neighborhood face index and \(\pi -\)electron energies of benzenoid hydrocarbons are constructed in Eq. (3) which shows a better correlation coefficient. Similarly, Eq. (4) describes the multiple linear regression model between \(\pi\)-electron energy, neghborhood face index, vertex connectivity index and edge connectivity index. We constructed statistical graphs for these correlations in Fig. 4, which is plotted between NFI versus \(\pi\)-electron energy (E).
\(R=0.990\); \(R^2(adjusted)=0.980\); \(SEE=0.9741\); \(F=987.512\); \(n=21\).
Multivariate correlation:
\(R=1.000\); \(R^2(adjusted)=0.999\); \(SEE=0.2015\); \(F=7714.178\); \(n=21\).
Linear regression model between NFI and BP
The linear regression models between neighborhood face index and boiling points of benzenoid hydrocarbons are constructed in Eq. (5) which shows a better correlation coefficient. Similarly, Eq. (6) describes the multiple linear regression model between boiling points, neghborhood face index, vertex connectivity index and edge connectivity index. We constructed statistical graphs for these correlations in Fig. 5, which is plotted between NFI versus boiling points BP.
\(R=0.9994\); \(R^2(adjusted)=0.969\); \(SEE=22.5524\); \(F=631.678\); \(n=21\). Multivariate correlation:
\(R=0.996\); \(R^2(adjusted)=0.991\); \(SEE=12.303\); \(F=723.172\); \(n=21\).
Main results
In this section, exact formulae for neighborhood face index of two dimensional Graphene, H-naphthalenic nanosheet and \(C_4C_8(S)\) nanosheet structures are evaluated. Two dimensional chemical structures of these compounds are given in Figs. 6, 7 and 8, respectively. Then, computed results are examined using graphical analysis. The number of unit cells in each row are represented by b and number of rows are represented by a. Utilizing the frequencies of faces, we constructed the tables and computed required results.
Result 1
Let G be the 2-dimensional molecular graph of graphene with \(a,b \ge 1\). Then NFI of G is:
Proof
Two prove the required results, we partitioned two dimensional graphene structure containing a rows and b unit cells in following cases.
Case 1: Face index of hydro-benzenoid (1, 1) which is benzene molecule is 48. For, \(a=1\) there exist two types of interval face \(\pounds _{32}\) and \(\pounds _{40}\) with cardinality 2 and \(b-2\), respectively. The degree of external face is \(2(13b-1)\). Then by definition, we have \(NFI=14b-18\) for a = 1.
Case 1: For, \(b=1\) there exist two types of interval face \(\pounds _{32}\) and \(\pounds _{40}\) with cardinality 2 and \(a-2\), respectively. The degree of external face is \(2(13a-1)\). Then by definition, we have \(NFI=14a-18\) for b = 1.
Case 2: When \(a,b \ne 1\), there are six types of enternal faces namely, \(\pounds _{38}\), \(\pounds _{42}\), \(\pounds _{43}\), \(\pounds _{47}\), \(\pounds _{52}\), \(\pounds _{54}\) and an external face \(\pounds _{\infty }\). If \(|\pounds _k|\) denotes the number of faces with neighborhood degree k, then following Table 2 represents the frequencies of such faces.
Utilizing the definition of neighborhood face index and Table 2
which completes our proof. \(\square\)
Result 2
Let G be the 2-dimensional molecular graph of H-naphthalenic nanosheet with \(a,b \ge 1\). Then NFI of G is:
Proof
Two prove the required results, we partitioned two dimensional H-naphthalenic nanosheet structure containing a rows and b unit cells in the following cases.
Case 1: For, \(a=1\) there exist two types of interval face \(\pounds _{32}\) and \(\pounds _{42}\) with cardinality \((b+1)\) and \(2(b-1)\), respectively. The degree of external face is \(70b-20\). Then by definition, we have \(NFI=186b-72\) for a = 1.
Case 2: For, \(b=1\) there exist three types of interval face \(\pounds _{38}\), \(\pounds _{44}\) and \(\pounds _{50}\) with cardinality 4, \(2(a-2)\) and \((a-1)\), respectively. The degree of external face is \(52a-21\). Then by definition, we have \(NFI=190a-76\) for a = 1.
Case 3: When \(a,b \ne 1\), there are eight types of internal faces namely, \(\pounds _{34}\), \(\pounds _{36}\), \(\pounds _{38}\), \(\pounds _{44}\), \(\pounds _{48}\), \(\pounds _{52}\), \(\pounds _{54}\), \(\pounds _{72}\) and an external face \(\pounds _{\infty }\). If \(|\pounds _k|\) denotes the number of faces with neighborhood degree k, then following Table 3 represents the frequencies of such faces. \(\square\)
which completes our proof. \(\square\)
Result 3
Let G be the 2-dimensional molecular graph of \(C_4C_8(S)\) nanosheet with \(a,b \ge 1\). Then NFI of G is:
Proof
Two prove the required results, we partitioned two dimensional \(C_4C_8(S)\) nanosheet structure containing a rows and b unit cells in following cases.
Case 1: For, \(a=1\) there exist three types of interval face \(\pounds _{32}\), \(\pounds _{42}\) and \(\pounds _{52}\) with cardinality \(b-1\), 2 and \(b-2\), respectively. The degree of external face is \(52b-20\). Then by definition, we have \(NFI=136b-72\) for \(a=1\).
Case 2: For, \(b=1\) there exist three types of interval face \(\pounds _{32}\), \(\pounds _{42}\) and \(\pounds _{52}\) with cardinality \(a-1\), 2 and \(a-2\), respectively. The degree of external face is \(52a-20\). Then by definition, we have \(NFI=136a-72\) for \(b=1\).
Case 3: When \(a,b \ne 1\), there are five types of enternal faces namely, \(\pounds _{34}\), \(\pounds _{36}\), \(\pounds _{52}\), \(\pounds _{62}\), \(\pounds _{72}\) and an external face \(\pounds _{\infty }\). If \(|\pounds _k|\) denotes the number of faces with neighborhood degree k, then following Table 4 represents the frequencies of such faces.
which completes our proof. \(\square\)
Result 4
Let G be the 2-dimensional molecular graph of \(C_4C_8(R)\) nanosheet with \(a,b \ge 1\). Then NFI of G is:
Proof
Two prove the required results, we partitioned two dimensional \(C_4C_8(R)\) nanosheet structure as given in Fig. 9 containing a rows and b unit cells in the following cases.
Case 1: For, \(a=1\) there exist four types of interval face \(\pounds _{26}\), \(\pounds _{31}\), \(\pounds _{66}\) and \(\pounds _{68}\) with cardinality 4, \(2(b-1)\), 2 and \((b-2)\), respectively. The degree of external face is \(44b+60\). Then by definition, we have \(NFI=186b-72\) for a = 1.
Case 2: For, \(b=1\) there exist four types of interval face \(\pounds _{26}\), \(\pounds _{31}\), \(\pounds _{66}\) and \(\pounds _{68}\) with cardinality 4, \(2(a-1)\), 2 and \((a-2)\), respectively. The degree of external face is \(44a+60\). Then by definition, we have \(NFI=186a-72\) for b = 1.
Case 3: When \(a,b \ne 1\), there are six types of internal faces namely, \(\pounds _{26}\), \(\pounds _{31}\), \(\pounds _{36}\), \(\pounds _{68}\), \(\pounds _{70}\), \(\pounds _{72}\) and an external face \(\pounds _{\infty }\). If \(|\pounds _k|\) denotes the number of faces with neighborhood degree k, then following Table 5 represents the frequencies of such faces.
which completes our proof. \(\square\)
Graphical analysis
The graphical representation depicted in Fig. 10 offers a visual insight into the evolving characteristics of topological descriptors as the number of molecules within a chemical structure increases. These figures vividly illustrate how these descriptors change with the expansion of the molecular set, providing a valuable perspective on structural trends. For a more detailed examination of these changes, Table 6 presents the numeric values of the Neighborhood Face Index (NFI). The data in this table reveals a discernible and progressive rise in the calculated NFI values, corresponding to the growth of the chemical structures. This observation underscores the relationship between molecular complexity and the NFI, shedding light on the structural intricacies that emerge as the chemical structure becomes more elaborate.
Conclusions
In this article, we introduced a new topological invariant namely, neighborhood face index which exhibits an extraordinary correlation coefficient \(R \ge 0.999\) for boiling points and \(R \ge 0.990\) for \(\pi\)-electron energies of benzenoid hydrocarbons utilizing regression models of NFI with mentioned physio-chemical quantities. We also calculated exact values of newly introduced TI for some carbon nanosheets and analyzed obtained results graphically to understand their behavior with variation in molecular structure as shown in Fig. 10. Our research work motivates researchers to examine the behaviour of different chemical compounds utilizing NFI.
Data availability
The paper includes the information used to verify the study’s findings.
References
Zhong, J. F., Rauf, A., Naeem, M., Rahman, J. & Aslam, A. Quantitative structure–property relationships (QSPR) of valency based topological indices with Covid-19 drugs and application. Arab. J. Chem. 14(7), 103240 (2021).
Yu, Y. et al. On some topological indices of metal–organic frameworks. Polycycl. Aromat. Compd. 43, 1–22 (2022).
Govardhan, S., Roy, S., Prabhu, S. & Siddiqui, M. K. Computation of neighborhood m-polynomial of three classes of polycyclic aromatic hydrocarbons. Polycycl. Aromat. Compd. 43, 1–17 (2022).
Siddiqui, M. K. et al. On topological analysis of niobium (II) oxide network via curve fitting and entropy measures. Complexityhttps://doi.org/10.1080/10406638.2022.2105909 (2022).
Consonni, R. T. V. Handbook of Molecular Descriptors (Wiley, 2000).
Raza, A., Munir, M., Abbas, T., Eldin, S. M. & Khan, I. Spectrum of prism graph and relation with network related quantities. AIMS Math. 8(2), 2634–2647 (2023).
Zhang, X., Raza, A. & Fahad, A. On face index of silicon carbides. Discrete Dyn Nat Soc 2020, 8 (2020).
Lee, J. R. et al. On ev and ve-degree based topological indices of silicon carbides. CMES Comput Model Eng Sci 130(2), 871–885 (2022).
Alghazzawi, D., Raza, A., Munir, U. & Ali, M. Chemical applicability of newly introduced topological invariants and their relation with polycyclic compounds. J. Math.https://doi.org/10.1155/2022/5867040 (2022).
Bondy, J. A. & Murty, U. S. R. Graph Theory (Springer, 2008).
Randic, M. Characterization of molecular branching. J. Am. Chem. Soc. 97(23), 6609–6615 (1975).
Estrada, E. Edge adjacency relationships and a novel topological index related to molecular volume. J. Chem. Inf. Comput. Sci. 35(1), 31–33 (1995).
Nikolic, S., Trinajstic, N. & Bauccic, I. Comparison between the vertex-and edge-connectivity indices for benzenoid hydrocarbons. J. Chem. Inf. Comput. Sci. 38(1), 42–46 (1998).
Jamil, M. K., Imran, M. & Abdul Sattar, K. Novel face index for benzenoid hydrocarbons. Mathematics 8(3), 312 (2020).
Huo, Y. et al. On certain topological indices of TUC 5 C 8 nanotubes. J. Comput. Theor. Nanosci. 13(12), 9158–9161 (2016).
Prabahar, K., Udhumansha, U., Elsherbiny, N. & Qushawy, M. Microneedle mediated transdermal delivery of β-sitosterol loaded nanostructured lipid nanoparticles for androgenic alopecia. Drug Deliv. 29(1), 3022–3034 (2022).
Heydari, A. & Taeri, B. Szeged index of TUC4C8 (S) nanotubes. Eur. J. Comb. 30(5), 1134–1141 (2009).
Sarapat, P., Baowan, D. & Hill, J. M. Interaction energy for a fullerene encapsulated in a carbon nanotorus. Z. Angew. Math. Phys. 69(3), 1–14 (2018).
Liu, C. P. & Xu, N. Magnetic response of chiral carbon nanotori: The dependence of torus radius. Physica B Condens. Matter 403(17), 2884–2887 (2008).
Virlan, M. J. R. et al. Organic nanomaterials and their applications in the treatment of oral diseases. Molecules 21(2), 207 (2016).
Nicks, J., Sasitharan, K., Prasad, R. R., Ashworth, D. J. & Foster, J. A. Metal-organic framework nanosheets: Programmable 2D materials for catalysis, sensing, electronics, and separation applications. Adv. Funct. Mater. 31(42), 2103723 (2021).
Cao, B. et al. Rational design of porous nanowall arrays of ultrafine Co4N nanoparticles confined in a La2O2CN2 matrix on carbon cloth for a high-performing supercapacitor electrode. ACS Appl. Mater. Interfaces 14(42), 47517–47528 (2022).
Ali, A., Nazeer, W., Munir, M. & Kang, S. M. M-polynomials and topological indices of zigzag and rhombic benzenoid systems. Open Chem. 16(1), 73–78 (2018).
Hasan, M. A. M., Wang, Y., Bowen, C. R. & Yang, Y. 2D nanomaterials for effective energy scavenging. Nano-Micro Lett. 13(1), 1–41 (2021).
Nadeem, M., Yousaf, A., Alolaiyan, H. & Razaq, A. Certain polynomials and related topological indices for the series of benzenoid graphs. Sci. Rep. 9(1), 1–5 (2019).
Streitwieser, A. & Smith, C. M. H. Dictionary of Pi-Electron Calculations (W. H. Freeman and Co., 1965).
Basak, S. C., Grunwald, G. D. & Niemi, G. J. Use of graph-theoretic and geometrical molecular descriptors in structure-activity relationships. In From Chemical Topology to Three-Dimensional Geometry, 73–116 (Springer, 2002).
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The collaborative efforts of A.R., M.I., and F.T.T. were integral to this manuscript. A.R. played a key role in study conceptualization, data acquisition, and manuscript drafting. M.I. contributed significantly to experimental work, data interpretation, and manuscript drafting. F.T.T. provided valuable insights in study design, data analysis, and critically reviewed the manuscript. All authors approved the final version, highlighting their collective commitment to the research.
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Raza, A., Ismaeel, M. & Tolasa, F.T. Valency based novel quantitative structure property relationship (QSPR) approach for predicting physical properties of polycyclic chemical compounds. Sci Rep 14, 7080 (2024). https://doi.org/10.1038/s41598-024-54962-5
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DOI: https://doi.org/10.1038/s41598-024-54962-5
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