Abstract
Epidemiological studies have observed some relationship between psoriasis and celiac disease (CD), while the causal link between these 2 autoimmune diseases was unclear. In the current study, we aimed to explore the causal link between psoriasis and celiac disease with bidirectional 2-sample Mendelian Randomization (MR) study. Eligible instrument variables (IVs) with genome-wide significance (p < 5E−08) were extracted from the summary-level datasets from the published genome-wide association studies (GWAS), which were conducted in the European population. The inverse variance weighted (IVW) method was performed as the main analysis, sensitivity analyses and post-MR analyses were also performed. Our MR analyses found that genetically doubling the odds of CD would increase the risk for psoriasis (p = 1.58e−03, OR [95% CI] 1.232 [1.061–1.432]). And the results were supported by sensitivity analyses. While we found that genetically determined psoriasis was not associated with the risk for CD (IVW: p = 0.985, OR [95% CI] 1.000 [0.965–1.037]). Our study provided novel genetic evidence that patients with CD were at an increased risk of developing psoriasis, while psoriasis was not associated with the risk for CD. Clinicians should be aware of the associations and pay attention to skin manifestations in patients with CD.
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Introduction
Psoriasis is a chronic immune-mediated and genetic disease that affects approximately 125 million people worldwide, which mainly manifests in the skin or joints or both1. The pathological mechanism of psoriasis is complex and remains unclear, while dysregulation of the innate and adaptive components of the immune system in psoriasis is now widely accepted2. Celiac disease (CD) is also an autoimmune disease characterized by a specific serological and histological profile triggered by gluten ingestion in genetically predisposed individuals3.
Psoriasis and CD both are associated with multiple autoimmune disorders, and association between psoriasis and CD has been explored by several observational studies, while the results were inconsistent4,5,6,7. Moreover, a comprehensive meta-analysis has found that psoriasis patients were 2.16-fold more likely to be diagnosed with CD, and the CD patients were 1.8-fold more likely to have psoriasis8. However, limitations should be acknowledged in observational studies, for example, it was difficult to control confounding factors, such as environmental factors, education levels, socio-economic status, et al. Moreover, it was unable to fully understand the true causal effect in observational studies because there might be a reverse causal effect.
To overcome the limitations in observational studies, Mendelian randomization (MR) was developed. As illustrated in Fig. 1A, MR is a genetic method that applies genetic variants (G) strongly associated with the exposure (X) as instrumental variables (IVs) in a non-experimental design to assess the causal effect of exposures (X) on outcomes (Y)9. The most important and fundamental step of MR is selecting eligible IVs (G), which are required to meet the following 3 assumptions: assumption 1 is that IVs should be related to exposure; assumption 2 is that IVs should be unrelated to any other risk factor/confounding that may affect the outcome variable, and assumption 3 is that IVs should not have a direct association with outcome10. Under these circumstances, we can calculate causality between X and Y using G. Notably, the direction of G → X → Y could ensure the direction of causality and avoid reverse causation. Moreover, assumption 2 could avoid confounding factors, and the test of horizontal pleiotropy in MR can also avoid confounding factors9. Therefore, MR has been widely used in identifying the causal relationship between risk factors and diseases11,12.
Few MR studies have been performed on psoriasis, which provided novel genetic evidence of the association between psoriasis and some risk factors, including type 2 diabetes13, interleukin 17 level14 and body mass index15. No MR study has been performed to explore the association between psoriasis and CD. In the current study, we aimed to systematically investigate the bidirectional genetic causality between psoriasis and CD with a bidirectional 2-sample MR design.
Material and methods
The flow chart of the study was shown in Fig. 1B.
GWASs dataset
GWAS summary statistics were obtained from published GWASs for psoriasis16 (Ncase = 10,558, Ncontrol = 22,806) and CD17 (Ncase = 4533, Ncontrol = 10,570). Briefly, the GWAS of psoriasis was combined from three existing GWAS datasets (referred to as Kiel, the Collaborative Association Study of Psoriasis and the Wellcome Trust Case Control Consortium 2) with two independent case–control datasets of individuals of European descent and all cases had been diagnosed as having psoriasis vulgaris16. Participants of CD GWAS were recruited from the UK, Finland, the Netherlands and Italy, and the diagnosis of CD was based on standard clinical, serological and histopathological criteria, including small intestinal biopsy17. The detailed methods for sample collection, genotyping and quality control can be found in the original studies16,17.
Instrument identification
Eligible IVs for MR should meet the following 3 assumptions10. Assumption 1 is that IVs should be related to exposure10. To ensure our IVs are strong, we restricted the set of single nucleotide polymorphisms (SNPs) to associations with a p-value smaller than 5E−08 as potential instruments; moreover, we removed weak instruments with F-statistics < 1010. Assumption 2 is that IVs should be unrelated to any other risk factor/confounding that may affect the outcome variable, and assumption 3 is that IVs should not have a direct association with outcome, both of which are also known as horizontal pleiotropy, which could be calculated as MR Egger intercept in the post-MR analysis10.
Bidirectional two-sample MR analysis
Once the IVs were selected, independent SNPs were set at a threshold of linkage disequilibrium (LD) at r2 = 0.001 within the window of 10 megabase pairs to avoid double counting and biased causal effect estimates. Next, the IVs were extracted from the outcome trait and were harmonized in both exposure and outcome GWAS. In this step, palindromic SNPs with intermediate allele frequency were removed. Moreover, if a particular requested SNP is not present in the outcome GWAS, then an SNP (proxy) that is in LD with the requested SNP (target) will be searched, which was defined using 1000 genomes European sample data (r2 ≥ 0.8). Once the exposure and outcome data are harmonized, MR can be performed. The inverse variance weighted (IVW) method was performed as the main analysis, which is the most efficient analysis method with valid IVs because it accounts for heterogeneity in the variant-specific causal estimates18. Moreover, additional sensitivity analyses including the simple mode, weighted mode, weighted median, and MR-Egger regression methods, were further conducted to assess the robustness of the findings18. And the leave-one-out analysis was conducted within the IVW method to assess the influence of individual variants on the observed association. Moreover, to ensure the causation was not distorted by the presence of reverse causation, the Steiger filtering test was applied, and p < 0.05 indicated that the effect direction is from exposure to an outcome19. Furthermore, post-MR analyses including Cochran's Q test for heterogeneity, MR Egger Intercept test for horizontal pleiotropy and MRPRESSO test for the outlier were also performed20. Lastly, we computed the proportion of variance in the phenotype explained by IVs and calculated the statistical power for the MR study with a two-sided type-I error rate α = 0.0521. The main statistical analyses were conducted using TwoSampleMR (v.0.5.5) in R package (V.4.1.2)22. The study was performed according to the STROBE MR guideline23.
Results
On the one hand, we studied the causal effect of CD on psoriasis. Twelve IVs were available after clumping (Supplementary Table S1). We found that each standard deviation of a genetically determined increase in CD was associated with approximately 20% increased risk of psoriasis (p = 1.58e−03, OR [95% CI] 1.232 [1.061–1.432]). And the results were further supported by weighted median (p = 8.50e−03, OR [95% CI] 1.130 [1.031–1.237]), simple mode (p = 0.019, OR [95% CI] 1.232 [1.061–1.432]) and weighted mode (p = 0.020, OR [95% CI] 1.113[1.020–1.215]). And the MR-Egger analysis also showed the same trend although did not reach statistical significance (p = 0.110, OR [95% CI] 1.266[0.972–1.650]) (Fig. 2A,B and Supplementary Table S3).
On the other hand, we studied the causal effect of psoriasis on CD. Twelve IVs were included (Supplementary Table S2). We found that genetically determined psoriasis was not associated with the risk for CD (IVW: p = 0.985, OR [95% CI] 1.000[0.965–1.037]), and the results were further supported by sensitivity analyses (Fig. 2A,C and Supplementary Table S3).
Next, we performed extra analysis to confirm the causal association between psoriasis and CD. The Steiger-filtering test indicated that the direction of causality was correct (p < 0.05). And the intercepts of MR-Egger were both not significantly deviated from zero, suggesting no apparent horizontal pleiotropy. The Cochran’s Q test did not detect any heterogeneity among the IVs, and the MR-PRESSO analysis did not detect potential instrumental outliers at the nominal significance level of 0.05. The leave-one-out results suggest that the causal effect was not driven by a single IV (Supplementary Fig. S1). Moreover, in the statistical power test, the power of assessing the causality of CD on psoriasis was 0.83, while the power of assessing the causality of psoriasis on CD was only 0.05(Table 1).
Discussion
It has been widely studied that patients with psoriasis and patients with CD were both more likely to develop other autoimmune diseases including type 1 diabetes, autoimmune thyroiditis, rheumatoid arthritis, et al24,25. Moreover, a meta-analysis also found a higher prevalence of psoriasis in patients with CD, as well as a higher prevalence of CD in patients with psoriasis8. However, observational studies were unable to avoid confounding factors and reverse causality. In the current study, we studied the bidirectional genetic relationship between these two autoimmune diseases with an unbiased MR design. And we provided novel genetic evidence that CD was associated with an increased risk of psoriasis, while psoriasis was not associated with the risk of CD.
CD and psoriasis are both immune-mediated diseases, more specifically, they are both T-cell mediated disorders26,27, and the immunogenic mechanisms might explain the causal link between CD and psoriasis. CD is a T-cell mediated immune disease in which gliadin-derived peptides activate lamina propria effector CD4 + T cells28. This activation could lead to the release of cytokines (including interferon-gamma, transforming growth factor-β, interleukin 2, and interleukin 10), as well as the activation of downstream effector T cells (including T-helper 1 cells, T-helper 17 cells, and regulatory T cells)28. And patients with CD were having altered intestinal barrier dysfunction, therefore, the proinflammatory cytokines and activated T cells could enter the blood with a subsequent increase in the dermis and epidermis, and ultimately lead to the development of psoriasis29.
Another mechanism of CD increasing the risk of psoriasis could be attributable to the gluten-free diet in patients with CD. On the one hand, gluten-free diet could lead to deficiencies in many kinds of vitamins (such as Vitamin D and Vitamin B12) and nutrients, such as iron, calcium and folate30, which could contribute to the development of psoriasis. For example, low vitamin D levels could involve in the pathogenesis of psoriasis through pathways including dysregulating keratinocytes proliferation, differentiation, and apoptosis, dysregulating of the cutaneous immune system (inhibition of T cell proliferation, Tregs induction), upregulating pro-inflammatory cytokines, inhibiting antimicrobial peptides expression, and destroying barrier integrity and permeability31. And Vitamin B12 could scavenge nitric oxides and reactive oxidative stress (ROS), while low levels of Vitamin B12 could exacerbate inflammatory oxidative stress32. On the other hand, gluten-free diet led to a higher content of both saturated and hydrogenated fatty acids30. Saturated fatty acids could sensitize myeloid cells to an increased inflammatory response in answer to proinflammatory stimuli, which in turn augments the activation of keratinocytes and exacerbates psoriasis33. In general, gluten-free diet plays an important role in the causality of CD on psoriasis.
There are some limitations that should be acknowledged in the current study. First, it is that completely excluding pleiotropy (assumption 2) is challenging for all MR analyses, because some unknown confound factor could influence both exposure and outcome; however, we applied MR-Egger intercept and MR-PRESSO to verify the lack of horizontal pleiotropy in the current study. Moreover, the statistical power of assessing the causality of psoriasis on CD was relatively low (0.05), which indicated that larger-sample-size GWAS of psoriasis would be necessary. Briefly, with a desired statistical power at 0.8 and with a presupposed OR at 1.2, a sample size of 14,210 cases and 33,156 cases would be required. Last but not least, the GWAS datasets used in the current study were both derived from the European population, more studies from other ethnic groups are needed to confirm the results.
Conclusion
Our study provided novel genetic evidence that patients with CD were at an increased risk of developing psoriasis, while psoriasis was not associated with the risk for CD. Clinicians should be aware of the associations and pay attention to skin manifestations in patients with CD.
Data availability
The datasets used and/or analyzed during the current study are available from the corresponding author upon reasonable request.
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Acknowledgements
The study was supported by the National Natural Science Foundation of China (Grant No. 81502719).
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L.L.: Conception; Methodology; Analyzing; Writing the manuscript; L.X.F.: Methodology; Analyzing; L.W.Z.: Reviewing; Y.Y.F.: Conception; Supervision; Revising the manuscript.
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Li, L., Fu, L., Zhang, L. et al. Mendelian randomization study of the genetic interaction between psoriasis and celiac disease. Sci Rep 12, 21508 (2022). https://doi.org/10.1038/s41598-022-25217-y
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DOI: https://doi.org/10.1038/s41598-022-25217-y
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