Featured
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Mining chicken ileal microbiota for immunomodulatory microorganisms
- Yan Liu
- , Yuqing Feng
- & Dan Liu
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Formation of a biofilm matrix network shapes polymicrobial interactions
- Lijun Wang
- , Hongxia Wang
- & Hui Wu
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The ColR/S two-component system is a conserved determinant of host association across Pseudomonas species
- Christina L. Wiesmann
- , Yue Zhang
- & Cara H. Haney
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| Open AccessImpact of host age on viral and bacterial communities in a waterbird population
- Sarah C. Hill
- , Sarah François
- & Oliver G. Pybus
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Gastric acid and escape to systemic circulation represent major bottlenecks to host infection by Citrobacter rodentium
- Sarah E. Woodward
- , Stefanie L. Vogt
- & B. Brett Finlay
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| Open AccessDissecting microbial communities and resistomes for interconnected humans, soil, and livestock
- Alexandre Maciel-Guerra
- , Michelle Baker
- & Tania Dottorini
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| Open AccessPresence of Blastocystis in gut microbiota is associated with cognitive traits and decreased executive function
- Jordi Mayneris-Perxachs
- , María Arnoriaga-Rodríguez
- & José Manuel Fernández-Real
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| Open AccessSelective induction of human gut-associated acetogenic/butyrogenic microbiota based on specific microbial colonization of indigestible starch granules
- Yusuke Nagara
- , Daichi Fujii
- & Kenji Oishi
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| Open AccessHuman gut-microbiome-derived propionate coordinates proteasomal degradation via HECTD2 upregulation to target EHMT2 in colorectal cancer
- Tae Young Ryu
- , Kwangho Kim
- & Hyun-Soo Cho
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Article
| Open AccessRole of the flagellar hook in the structural development and antibiotic tolerance of Pseudomonas aeruginosa biofilms
- Jules D. P. Valentin
- , Hervé Straub
- & Qun Ren
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| Open AccessAltered metabolome and microbiome features provide clues in understanding irritable bowel syndrome and depression comorbidity
- Lijuan Han
- , Ling Zhao
- & Xiaodong Fang
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Association of bacterial community types, functional microbial processes and lung disease in cystic fibrosis airways
- Stefanie Widder
- , Jiangchao Zhao
- & John J. LiPuma
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| Open AccessInter-species interactions alter antibiotic efficacy in bacterial communities
- Michael J. Bottery
- , Jessica L. Matthews
- & Ville-Petri Friman
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| Open AccessFecal filtrate transplantation protects against necrotizing enterocolitis
- Anders Brunse
- , Ling Deng
- & Thomas Thymann
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Non-diphtheriae Corynebacterium species are associated with decreased risk of pneumococcal colonization during infancy
- Matthew S. Kelly
- , Catherine Plunkett
- & Patrick C. Seed
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| Open AccessArtificial sweeteners stimulate horizontal transfer of extracellular antibiotic resistance genes through natural transformation
- Zhigang Yu
- , Yue Wang
- & Jianhua Guo
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| Open AccessCompositional and genetic alterations in Graves’ disease gut microbiome reveal specific diagnostic biomarkers
- Qiyun Zhu
- , Qiangchuan Hou
- & Jiachao Zhang
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| Open AccessNovel strain-level resolution of Crohn’s disease mucosa-associated microbiota via an ex vivo combination of microbe culture and metagenomic sequencing
- J. J. Teh
- , E. M. Berendsen
- & M. Morrison
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| Open AccessChlorine disinfection facilitates natural transformation through ROS-mediated oxidative stress
- Shuai Zhang
- , Yue Wang
- & Jianhua Guo
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| Open AccessNon-antibiotic pharmaceuticals promote the transmission of multidrug resistance plasmids through intra- and intergenera conjugation
- Yue Wang
- , Ji Lu
- & Jianhua Guo
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Brief Communication |
Conserved bacterial de novo guanine biosynthesis pathway enables microbial survival and colonization in the environmental niche of the urinary tract
- Deepak S. Ipe
- , Matthew J. Sullivan
- & Glen C. Ulett
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| Open AccessPriority effects dictate community structure and alter virulence of fungal-bacterial biofilms
- J. Z. Alex Cheong
- , Chad J. Johnson
- & Lindsay R. Kalan
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Cervicovaginal bacterial communities in reproductive-aged Tanzanian women with Schistosoma mansoni, Schistosoma haematobium, or without schistosome infection
- Brooke W. Bullington
- , Myung Hee Lee
- & Jennifer A. Downs
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Coinfection and infection duration shape how pathogens affect the African buffalo gut microbiota
- Kate A. Sabey
- , Se Jin Song
- & Vanessa O. Ezenwa
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| Open AccessMetabolic modeling predicts specific gut bacteria as key determinants for Candida albicans colonization levels
- Mohammad H. Mirhakkak
- , Sascha Schäuble
- & Gianni Panagiotou
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| Open AccessMucin-derived O-glycans supplemented to diet mitigate diverse microbiota perturbations
- K. M. Pruss
- , A. Marcobal
- & J. L. Sonnenburg
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Brief Communication |
Cytometric fingerprints of gut microbiota predict Crohn’s disease state
- Peter Rubbens
- , Ruben Props
- & Willem Waegeman
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| Open AccessThe saccharibacterium TM7x elicits differential responses across its host range
- Daniel R. Utter
- , Xuesong He
- & Batbileg Bor
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Multi-omic meta-analysis identifies functional signatures of airway microbiome in chronic obstructive pulmonary disease
- Zhang Wang
- , Yuqiong Yang
- & Wensheng Shu
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Linking perturbations to temporal changes in diversity, stability, and compositions of neonatal calf gut microbiota: prediction of diarrhea
- Tao Ma
- , Clothilde Villot
- & Le Luo Guan
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Fish oil supplementation reduces maternal defensive inflammation and predicts a gut bacteriome with reduced immune priming capacity in infants
- Candice Quin
- , Deanna M. Vollman
- & Deanna L. Gibson
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The gut microbiota contributes to the development of Staphylococcus aureus-induced mastitis in mice
- Xiaoyu Hu
- , Jian Guo
- & Naisheng Zhang
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| Open AccessChlorine disinfection promotes the exchange of antibiotic resistance genes across bacterial genera by natural transformation
- Min Jin
- , Lu Liu
- & Jun-wen Li
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US nativity and dietary acculturation impact the gut microbiome in a diverse US population
- Brandilyn A. Peters
- , Stella S. Yi
- & Jiyoung Ahn
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The relationship between fecal bile acids and microbiome community structure in pediatric Crohn’s disease
- Jessica Connors
- , Katherine A Dunn
- & Johan Van Limbergen
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The subgingival microbiome associated with periodontitis in type 2 diabetes mellitus
- Baochen Shi
- , Renate Lux
- & Huiying Li
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| Open AccessUntangling the dynamics of persistence and colonization in microbial communities
- Sylvia L. Ranjeva
- , Joseph R. Mihaljevic
- & Greg Dwyer
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Microbiome analysis as a platform R&D tool for parasitic nematode disease management
- Glenn Hogan
- , Sidney Walker
- & Dave J. Bartley
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| Open AccessUnveiling the role of Gardnerella vaginalis in polymicrobial Bacterial Vaginosis biofilms: the impact of other vaginal pathogens living as neighbors
- Joana Castro
- , Daniela Machado
- & Nuno Cerca
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| Open AccessThe impact of early-life sub-therapeutic antibiotic treatment (STAT) on excessive weight is robust despite transfer of intestinal microbes
- Anjelique F. Schulfer
- , Jonas Schluter
- & Martin J. Blaser
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Pathogen population structure can explain hospital outbreaks
- Fabrizio Spagnolo
- , Pierre Cristofari
- & Daniel E. Dykhuizen
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Macroevolution of gastric Helicobacter species unveils interspecies admixture and time of divergence
- Annemieke Smet
- , Koji Yahara
- & Jukka Corander
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Interplay between gut microbiota metabolism and inflammation in HIV infection
- Jorge F. Vázquez-Castellanos
- , Sergio Serrano-Villar
- & María José Gosalbes
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Association of gut microbial communities with plasma lipopolysaccharide-binding protein (LBP) in premenopausal women
We found distinct differences between tertiles of LBP regarding the diversity and composition of the microbiome, as well as differences in functional genes that potentially activate LBP.
- Jessica S Citronberg
- , Keith R Curtis
- & Meredith AJ Hullar
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| Open AccessElevated circulating levels of succinate in human obesity are linked to specific gut microbiota
- Carolina Serena
- , Victoria Ceperuelo-Mallafré
- & Sonia Fernández-Veledo
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| Open AccessOral microbiota of periodontal health and disease and their changes after nonsurgical periodontal therapy
- Casey Chen
- , Chris Hemme
- & Jizhong Zhou
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Original Article |
Evidence for a primate origin of zoonotic Helicobacter suis colonizing domesticated pigs
- Bram Flahou
- , Mirko Rossi
- & Freddy Haesebrouck