Featured
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Article
| Open AccessConsuming fresh macroalgae induces specific catabolic pathways, stress reactions and Type IX secretion in marine flavobacterial pioneer degraders
- Maéva Brunet
- , Nolwen Le Duff
- & François Thomas
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Article
| Open AccessBacterial matrix metalloproteases and serine proteases contribute to the extra-host inactivation of enteroviruses in lake water
- Marie-Hélène Corre
- , Virginie Bachmann
- & Tamar Kohn
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Article
| Open AccessDiscovery of lignin-transforming bacteria and enzymes in thermophilic environments using stable isotope probing
- David J. Levy-Booth
- , Laura E. Navas
- & William W. Mohn
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Brief Communication
| Open AccessPhotophysiological response of Symbiodiniaceae single cells to temperature stress
- Linhong Xiao
- , Sofia Johansson
- & Lars Behrendt
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Brief Communication
| Open AccessSaccharibacteria harness light energy using type-1 rhodopsins that may rely on retinal sourced from microbial hosts
- Alexander L. Jaffe
- , Masae Konno
- & Jillian F. Banfield
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Article
| Open AccessLinking transcriptional dynamics of CH4-cycling grassland soil microbiomes to seasonal gas fluxes
- Jana Täumer
- , Sven Marhan
- & Tim Urich
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Article
| Open AccessStrain-specific transcriptional responses overshadow salinity effects in a marine diatom sampled along the Baltic Sea salinity cline
- Eveline Pinseel
- , Teofil Nakov
- & Andrew J. Alverson
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Article
| Open AccessMeta-omics-aided isolation of an elusive anaerobic arsenic-methylating soil bacterium
- Karen Viacava
- , Jiangtao Qiao
- & Rizlan Bernier-Latmani
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Novel indole-mediated potassium ion import system confers a survival advantage to the Xanthomonadaceae family
- Yuxiang Zhu
- , Yong Han
- & Yan Wang
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Article
| Open AccessIdentification of active gaseous-alkane degraders at natural gas seeps
- Muhammad Farhan Ul Haque
- , Marcela Hernández
- & J. Colin Murrell
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Article
| Open AccessPivotal role of O-antigenic polysaccharide display in the sensitivity against phage tail-like particles in environmental Pseudomonas kin competition
- Clara Margot Heiman
- , Monika Maurhofer
- & Jordan Vacheron
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Article
| Open AccessQuantification of archaea-driven freshwater nitrification from single cell to ecosystem levels
- Franziska Klotz
- , Katharina Kitzinger
- & Michael Pester
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Article
| Open AccessThe novel genus, ‘Candidatus Phosphoribacter’, previously identified as Tetrasphaera, is the dominant polyphosphate accumulating lineage in EBPR wastewater treatment plants worldwide
- C. M. Singleton
- , F. Petriglieri
- & P. H. Nielsen
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Article
| Open AccessActive anaerobic methane oxidation and sulfur disproportionation in the deep terrestrial subsurface
- Emma Bell
- , Tiina Lamminmäki
- & Rizlan Bernier-Latmani
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Article
| Open AccessNiche partitioning of the ubiquitous and ecologically relevant NS5 marine group
- Taylor Priest
- , Anneke Heins
- & Bernhard M. Fuchs
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Article
| Open AccessBiological manganese-dependent sulfide oxidation impacts elemental gradients in redox-stratified systems: indications from the Black Sea water column
- J. V. Henkel
- , H. N. Schulz-Vogt
- & K. Jürgens
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Article
| Open AccessCultivation and biogeochemical analyses reveal insights into methanogenesis in deep subseafloor sediment at a biogenic gas hydrate site
- Taiki Katayama
- , Hideyoshi Yoshioka
- & Susumu Sakata
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Article
| Open AccessOrganochlorine contamination enriches virus-encoded metabolism and pesticide degradation associated auxiliary genes in soil microbiomes
- Xiaoxuan Zheng
- , Martin T. Jahn
- & Yong-Guan Zhu
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Article
| Open AccessSoils and sediments host Thermoplasmata archaea encoding novel copper membrane monooxygenases (CuMMOs)
- Spencer Diamond
- , Adi Lavy
- & Jillian F. Banfield
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Article
| Open AccessDissecting the dominant hot spring microbial populations based on community-wide sampling at single-cell genomic resolution
- Robert M. Bowers
- , Stephen Nayfach
- & Tanja Woyke
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Article |
Toward quantifying the adaptive role of bacterial pangenomes during environmental perturbations
- Roth E. Conrad
- , Tomeu Viver
- & Konstantinos T. Konstantinidis
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Article
| Open AccessLineage-specific energy and carbon metabolism of sponge symbionts and contributions to the host carbon pool
- I. Burgsdorf
- , S. Sizikov
- & L. Steindler
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Article
| Open AccessBolstering fitness via CO2 fixation and organic carbon uptake: mixotrophs in modern groundwater
- Martin Taubert
- , Will A. Overholt
- & Kirsten Küsel
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Article
| Open AccessWater-driven microbial nitrogen transformations in biological soil crusts causing atmospheric nitrous acid and nitric oxide emissions
- S. Maier
- , A. M. Kratz
- & B. Weber
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Article
| Open AccessUnexpected diversity among small-scale sample replicates of defined plant root compartments
- Sally Attia
- , Jakob Russel
- & Søren J. Sørensen
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Article
| Open AccessUniversal activity-based labeling method for ammonia- and alkane-oxidizing bacteria
- Dimitra Sakoula
- , Garrett J. Smith
- & Sebastian Lücker
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Activity-based, genome-resolved metagenomics uncovers key populations and pathways involved in subsurface conversions of coal to methane
- Luke J. McKay
- , Heidi J. Smith
- & Matthew W. Fields
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Article
| Open AccessAdaptation to an amoeba host drives selection of virulence-associated traits in Vibrio cholerae
- M. Mozammel Hoque
- , Parisa Noorian
- & Diane McDougald
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Sulfur cycling and host-virus interactions in Aquificales-dominated biofilms from Yellowstone’s hottest ecosystems
- Luke J. McKay
- , Olivia D. Nigro
- & William P. Inskeep
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Coordination of root auxin with the fungus Piriformospora indica and bacterium Bacillus cereus enhances rice rhizosheath formation under soil drying
- Feiyun Xu
- , Hanpeng Liao
- & Weifeng Xu
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Review Article |
Microbial storage and its implications for soil ecology
- Kyle Mason-Jones
- , Serina L. Robinson
- & Wim H. van der Putten
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Article |
Bacillus velezensis stimulates resident rhizosphere Pseudomonas stutzeri for plant health through metabolic interactions
- Xinli Sun
- , Zhihui Xu
- & Ákos T. Kovács
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Article
| Open AccessHydrodynamic disturbance controls microbial community assembly and biogeochemical processes in coastal sediments
- Ya-Jou Chen
- , Pok Man Leung
- & Chris Greening
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Macroecological distributions of gene variants highlight the functional organization of soil microbial systems
- Arthur Escalas
- , Fabiana S. Paula
- & Jizhong Zhou
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Article
| Open AccessVerrucomicrobiota are specialist consumers of sulfated methyl pentoses during diatom blooms
- Luis H. Orellana
- , T. Ben Francis
- & Rudolf I. Amann
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Article
| Open AccessNitrous oxide respiring bacteria in biogas digestates for reduced agricultural emissions
- Kjell Rune Jonassen
- , Live H. Hagen
- & Lars R. Bakken
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Article
| Open AccessHighly diverse flavobacterial phages isolated from North Sea spring blooms
- Nina Bartlau
- , Antje Wichels
- & Cristina Moraru
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Brief Communication
| Open AccessSpatial separation of ribosomes and DNA in Asgard archaeal cells
- Burak Avcı
- , Jakob Brandt
- & Kasper Urup Kjeldsen
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Article
| Open AccessIntraspecific variation in metal tolerance modulate competition between two marine diatoms
- Björn Andersson
- , Anna Godhe
- & Karin Rengefors
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Brief Communication
| Open AccessDiversity, prevalence, and expression of cyanase genes (cynS) in planktonic marine microorganisms
- Xuewei Mao
- , Jianwei Chen
- & Thomas Mock
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Article |
Salt tolerance-based niche differentiation of soil ammonia oxidizers
- Xiangxin Sun
- , Jun Zhao
- & Zhongjun Jia
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Large-scale protein level comparison of Deltaproteobacteria reveals cohesive metabolic groups
- Marguerite V. Langwig
- , Valerie De Anda
- & Brett J. Baker
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Article
| Open AccessUnraveling negative biotic interactions determining soil microbial community assembly and functioning
- Sana Romdhane
- , Aymé Spor
- & Laurent Philippot
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Article
| Open AccessMicrobial drivers of methane emissions from unrestored industrial salt ponds
- Jinglie Zhou
- , Susanna M. Theroux
- & Susannah G. Tringe
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Article
| Open AccessQuantifying the effects of hydrogen on carbon assimilation in a seafloor microbial community associated with ultramafic rocks
- Ömer K. Coskun
- , Aurèle Vuillemin
- & William D. Orsi
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Article
| Open AccessEvolutionarily recent dual obligatory symbiosis among adelgids indicates a transition between fungus- and insect-associated lifestyles
- Gitta Szabó
- , Frederik Schulz
- & Matthias Horn
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Article
| Open AccessNovel Antarctic yeast adapts to cold by switching energy metabolism and increasing small RNA synthesis
- D. Touchette
- , I. Altshuler
- & L. G. Whyte
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Evidence for methanobactin “Theft” and novel chalkophore production in methanotrophs: impact on methanotrophic-mediated methylmercury degradation
- Christina S. Kang-Yun
- , Xujun Liang
- & Jeremy D. Semrau
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Article |
Sulfate differentially stimulates but is not respired by diverse anaerobic methanotrophic archaea
- Hang Yu
- , Connor T. Skennerton
- & Victoria J. Orphan