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Original Article |
Particle-size distributions and seasonal diversity of allergenic and pathogenic fungi in outdoor air
- Naomichi Yamamoto
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- & Jordan Peccia
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Original Article |
Plant litter and soil type drive abundance, activity and community structure of alkB harbouring microbes in different soil compartments
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Original Article |
Microbial diversity in arctic freshwaters is structured by inoculation of microbes from soils
- Byron C Crump
- , Linda A Amaral-Zettler
- & George W Kling
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Original Article |
Structure, fluctuation and magnitude of a natural grassland soil metagenome
- Tom O Delmont
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- & Timothy M Vogel
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Original Article
| Open AccessArchitectural design influences the diversity and structure of the built environment microbiome
- Steven W Kembel
- , Evan Jones
- & Jessica L Green
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Original Article |
Pseudomonas syringae naturally lacking the canonical type III secretion system are ubiquitous in nonagricultural habitats, are phylogenetically diverse and can be pathogenic
- Moudjahidou Demba Diallo
- , Caroline L Monteil
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Original Article |
Identification and isolation of active N2O reducers in rice paddy soil
- Satoshi Ishii
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Original Article |
A novel fungal family of oligopeptide transporters identified by functional metatranscriptomics of soil eukaryotes
- Coralie Damon
- , Laurent Vallon
- & Roland Marmeisse
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Perspective |
Metagenomic mining for microbiologists
- Tom O Delmont
- , Cedric Malandain
- & Timothy M Vogel
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Original Article
| Open AccessCommunity profiling and gene expression of fungal assimilatory nitrate reductases in agricultural soil
- Markus Gorfer
- , Marzena Blumhoff
- & Joseph Strauss
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Original Article |
Identification of a novel acetate-utilizing bacterium belonging to Synergistes group 4 in anaerobic digester sludge
- Tsukasa Ito
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Original Article |
Agriculture's impact on microbial diversity and associated fluxes of carbon dioxide and methane
- Uri Y Levine
- , Tracy K Teal
- & Thomas M Schmidt
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Original Article |
Effect of warming and drought on grassland microbial communities
- Cody S Sheik
- , William Howard Beasley
- & Lee R Krumholz
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Original Article |
Seasonal bloom dynamics and ecophysiology of the freshwater sister clade of SAR11 bacteria ‘that rule the waves’ (LD12)
- Michaela M Salcher
- , Jakob Pernthaler
- & Thomas Posch
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Original Article
| Open AccessReversal in competitive dominance of a toxic versus non-toxic cyanobacterium in response to rising CO2
- Dedmer B Van de Waal
- , Jolanda MH Verspagen
- & Jef Huisman
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Original Article |
Impacts of anthropogenic activity on the ecology of class 1 integrons and integron-associated genes in the environment
- William H Gaze
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- & Elizabeth M H Wellington
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Original Article |
Chemolithotrophic acetogenic H2/CO2 utilization in Italian rice field soil
- Fanghua Liu
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Original Article |
Reproducibility and quantitation of amplicon sequencing-based detection
- Jizhong Zhou
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Original Article |
Autotrophic growth of nitrifying community in an agricultural soil
- Weiwei Xia
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Short Communication |
Ammonia concentration determines differential growth of ammonia-oxidising archaea and bacteria in soil microcosms
- Daniel T Verhamme
- , James I Prosser
- & Graeme W Nicol
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Original Article |
Spatial distribution of ammonia-oxidizing bacteria and archaea across a 44-hectare farm related to ecosystem functioning
- Ella Wessén
- , Mats Söderström
- & Sara Hallin
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Original Article |
Relationship between bacterial diversity and function under biotic control: the soil pesticide degraders as a case study
- Cécile Monard
- , Philippe Vandenkoornhuyse
- & Françoise Binet
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Original Article |
Microbial community structures in anoxic freshwater lake sediment along a metal contamination gradient
- Heidi L Gough
- & David A Stahl
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Original Article |
The earthworm Aporrectodea caliginosa stimulates abundance and activity of phenoxyalkanoic acid herbicide degraders
- Ya-Jun Liu
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- & Marcus A Horn
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Original Article |
Archaea in artificial environments: Their presence in global spacecraft clean rooms and impact on planetary protection
- Christine Moissl-Eichinger
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Short Communication |
Analysis of human and animal fecal microbiota for microbial source tracking
- Jung Eun Lee
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Original Article |
Clostridiaceae and Enterobacteriaceae as active fermenters in earthworm gut content
- Pia K Wüst
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Original Article |
Effect of nitrogen fertilization on methane oxidation, abundance, community structure, and gene expression of methanotrophs in the rice rhizosphere
- Minita Shrestha
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Original Article |
A ‘rare biosphere’ microorganism contributes to sulfate reduction in a peatland
- Michael Pester
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Original Article |
A new chlorophyll d-containing cyanobacterium: evidence for niche adaptation in the genus Acaryochloris
- Remus Mohr
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Original Article |
Soil bacterial and fungal communities across a pH gradient in an arable soil
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- & Noah Fierer
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Original Article |
The genus Micromonospora is widespread in legume root nodules: the example of Lupinus angustifolius
- Martha E Trujillo
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- & Eustoquio Martínez-Molina
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Original Article |
DNA-SIP identifies sulfate-reducing Clostridia as important toluene degraders in tar-oil-contaminated aquifer sediment
- Christian Winderl
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Original Article |
The functional potential of high Arctic permafrost revealed by metagenomic sequencing, qPCR and microarray analyses
- Etienne Yergeau
- , Hervé Hogues
- & Charles W Greer
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Original Article |
Freshwater Perkinsea and marine-freshwater colonizations revealed by pyrosequencing and phylogeny of environmental rDNA
- Jon Bråte
- , Ramiro Logares
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Original Article |
Effects of soil type and farm management on soil ecological functional genes and microbial activities
- Jennifer R Reeve
- , Christopher W Schadt
- & John P Reganold
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Original Article |
Bacterial diversity in rhizosphere soil from Antarctic vascular plants of Admiralty Bay, maritime Antarctica
- Lia C R S Teixeira
- , Raquel S Peixoto
- & Alexandre S Rosado
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Original Article |
Metaproteogenomic analysis of a dominant green sulfur bacterium from Ace Lake, Antarctica
- Charmaine Ng
- , Matthew Z DeMaere
- & Ricardo Cavicchioli
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Original Article |
Bacterial gene abundances as indicators of greenhouse gas emission in soils
- Sergio E Morales
- , Theodore Cosart
- & William E Holben
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Short Communication |
Microbial secondary succession in a chronosequence of chalk grasslands
- Eiko E Kuramae
- , Hannes A Gamper
- & George A Kowalchuk
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Original Article |
Characterisation of microbial communities colonising the hyphal surfaces of arbuscular mycorrhizal fungi
- Tanja R Scheublin
- , Ian R Sanders
- & Jan Roelof van der Meer
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Original Article |
Viral and microbial community dynamics in four aquatic environments
- Beltran Rodriguez-Brito
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