ADVANCE ONLINE PUBLICATION
The latest research papers, published online ahead of print. These online versions are definitive and may be cited using the digital object identifier (DOI).
About advance online publication
Commentaries
July 16 2008
Microbes orchestrate life on Earth FREE
George A Kowalchuk, Susan E Jones and Linda L Blackall
ISME J advance online publication, July 16, 2008; doi:10.1038/ismej.2008.61
June 19 2008
On the contributions of David Cleaveland White, MD, PhD to microbial ecology: celebrating the life of a pioneer
Brandon EL Morris, Bryan R Crable and Joseph M Suflita
ISME J advance online publication, June 19, 2008; doi:10.1038/ismej.2008.65
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July 10 2008
Microbial contributions to climate change through carbon cycle feedbacks FREE
Richard D Bardgett, Chris Freeman and Nicholas J Ostle
ISME J advance online publication, July 10, 2008; doi:10.1038/ismej.2008.58
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Original Articles
July 24 2008
Quorum-sensing signals in the microbial community of the cabbage white butterfly larval midgut
Bradley R Borlee, Grant D Geske, Courtney J Robinson, Helen E Blackwell and Jo Handelsman
ISME J advance online publication, July 24, 2008; doi:10.1038/ismej.2008.70
Seasonality of rDNA- and rRNA-derived archaeal communities and methanogenic potential in a boreal mire
Heli Juottonen, Eeva-Stiina Tuittila, Sari Juutinen, Hannu Fritze and Kim Yrjälä
ISME J advance online publication, July 24, 2008; doi:10.1038/ismej.2008.66
Transcription of nitrification genes by the methane-oxidizing bacterium, Methylococcus capsulatus strain Bath
Amisha T Poret-Peterson, James E Graham, Jay Gulledge and Martin G Klotz
ISME J advance online publication, July 24, 2008; doi:10.1038/ismej.2008.71
Abstract | Full Text | PDF | Supplementary information
The rational exploration of microbial diversity
Christopher Quince, Thomas P Curtis and William T Sloan
ISME J advance online publication, July 24, 2008; doi:10.1038/ismej.2008.69
July 17 2008
Quorum sensing in Cyanobacteria: N-octanoyl-homoserine lactone release and response, by the epilithic colonial cyanobacterium Gloeothece PCC6909
Dilara I Sharif, John Gallon, Chris J Smith and Ed Dudley
ISME J advance online publication, July 17, 2008; doi:10.1038/ismej.2008.68
Abstract | Full Text | PDF | Supplementary information
June 26 2008
Genomic patterns of recombination, clonal divergence and environment in marine microbial populations
Konstantinos T Konstantinidis and Edward F DeLong
ISME J advance online publication, June 26, 2008; doi:10.1038/ismej.2008.62
Abstract | Full Text | PDF | Supplementary information
Microbial ecology of the equine hindgut during oligofructose-induced laminitis
Gabriel J Milinovich, Paul C Burrell, Christopher C Pollitt, Athol V Klieve, Linda L Blackall, Diane Ouwerkerk, Erika Woodland and Darren J Trott
ISME J advance online publication, June 26, 2008; doi:10.1038/ismej.2008.67
Abstract | Full Text | PDF | Supplementary information
Seasonal dynamics of the endosymbiotic, nitrogen-fixing cyanobacterium Richelia intracellularis in the eastern Mediterranean Sea
Edo Bar Zeev, Tali Yogev, Dikla Man-Aharonovich, Nurit Kress, Barak Herut, Oded Béjà and Ilana Berman-Frank
ISME J advance online publication, June 26, 2008; doi:10.1038/ismej.2008.56
June 19 2008
Protein-based stable isotope probing (Protein-SIP) reveals active species within anoxic mixed cultures
Nico Jehmlich, Frank Schmidt, Martin von Bergen, Hans-Hermann Richnow and Carsten Vogt
ISME J advance online publication, June 19, 2008; doi:10.1038/ismej.2008.64
Abstract | Full Text | PDF | Supplementary information
Light dependency of nitrogen fixation in a coastal cyanobacterial mat
Ina Severin and Lucas J Stal
ISME J advance online publication, June 19, 2008; doi:10.1038/ismej.2008.63
High aromatic ring-cleavage diversity in birch rhizosphere: PAH treatment-specific changes of I.E.3 group extradiol dioxygenases and 16S rRNA bacterial communities in soil
Timo P Sipilä, Anna-Kaisa Keskinen, Marja-Leena Åkerman, Carola Fortelius, Kielo Haahtela and Kim Yrjälä
ISME J advance online publication, June 19, 2008; doi:10.1038/ismej.2008.50
June 12 2008
Isolation of Streptomyces sp. PCB7, the first microorganism demonstrating high-affinity uptake of tropospheric H2
Philippe Constant, Laurier Poissant and Richard Villemur
ISME J advance online publication, June 12, 2008; doi:10.1038/ismej.2008.59
Dynamics and diversity of newly produced virioplankton in the North Sea
Verónica Parada, Anne-Claire Baudoux, Eva Sintes, Markus G Weinbauer and Gerhard J Herndl
ISME J advance online publication, June 12, 2008; doi:10.1038/ismej.2008.57
Characterization of Fe(II) oxidizing bacterial activities and communities at two acidic Appalachian coalmine drainage-impacted sites
John M Senko, Pauline Wanjugi, Melanie Lucas, Mary Ann Bruns and William D Burgos
ISME J advance online publication, June 12, 2008; doi:10.1038/ismej.2008.60
Abstract | Full Text | PDF | Supplementary information
June 5 2008
Spatial structure and nutrients promote invasion of IncP-1 plasmids in bacterial populations
Randal E Fox, Xue Zhong, Stephen M Krone and Eva M Top
ISME J advance online publication, June 5, 2008; doi:10.1038/ismej.2008.53
Distantly sampled soils carry few species in common
Roberta R Fulthorpe, Luiz F W Roesch, Alberto Riva and Eric W Triplett
ISME J advance online publication, June 5, 2008; doi:10.1038/ismej.2008.55
Abstract | Full Text | PDF | Supplementary information
Indole cell signaling occurs primarily at low temperatures in Escherichia coli
Jintae Lee, Xue-Song Zhang, Manjunath Hegde, William E Bentley, Arul Jayaraman and Thomas K Wood
ISME J advance online publication, June 5, 2008; doi:10.1038/ismej.2008.54
Abstract | Full Text | PDF | Supplementary information
Diversity and abundance of diazotrophic microorganisms in the South China Sea during intermonsoon
Pia H Moisander, Roxanne A Beinart, Maren Voss and Jonathan P Zehr
ISME J advance online publication, June 5, 2008; doi:10.1038/ismej.2008.51
Abstract | Full Text | PDF | Supplementary information
Long-term experimental warming alters nitrogen-cycling communities but site factors remain the primary drivers of community structure in high arctic tundra soils
Jennifer K M Walker, Keith N Egger and Gregory H R Henry
ISME J advance online publication, June 5, 2008; doi:10.1038/ismej.2008.52
Abstract | Full Text | PDF | Supplementary information
May 29 2008
Function and evolution of the psbA gene family in marine Synechococcus: Synechococcus sp. WH7803 as a case study
Laurence Garczarek, Alexis Dufresne, Nicolas Blot, Amanda M Cockshutt, Anne Peyrat, Douglas A Campbell, Ludovic Joubin and Christophe Six
ISME J advance online publication, May 29, 2008; doi:10.1038/ismej.2008.46
Abstract | Full Text | PDF | Supplementary information
May 15 2008
Pseudomonas aeruginosa uses type III secretion system to kill biofilm-associated amoebae
Carsten Matz, Ana Maria Moreno, Morten Alhede, Mike Manefield, Alan R Hauser, Michael Givskov and Staffan Kjelleberg
ISME J advance online publication, May 15, 2008; doi:10.1038/ismej.2008.47
Abstract | Full Text | PDF | Supplementary information
Temperature thresholds for bacterial symbiosis with a sponge
Nicole S Webster, Rose E Cobb and Andrew P Negri
ISME J advance online publication, May 15, 2008; doi:10.1038/ismej.2008.42
Abstract | Full Text | PDF | Supplementary information
May 8 2008
Hindsight in the relative abundance, metabolic potential and genome dynamics of uncultivated marine archaea from comparative metagenomic analyses of bathypelagic plankton of different oceanic regions
Ana-Belen Martin-Cuadrado, Francisco Rodriguez-Valera, David Moreira, José C Alba, Elena Ivars-Martínez, Matthew R Henn, Emmanuel Talla and Purificación López-García
ISME J advance online publication, May 8, 2008; doi:10.1038/ismej.2008.40
Abstract | Full Text | PDF | Supplementary information
May 1 2008
Community proteogenomics highlights microbial strain-variant protein expression within activated sludge performing enhanced biological phosphorus removal
Paul Wilmes, Anders F Andersson, Mark G Lefsrud, Margaret Wexler, Manesh Shah, Bing Zhang, Robert L Hettich, Philip L Bond, Nathan C VerBerkmoes and Jillian F Banfield
ISME J advance online publication, May 1, 2008; doi:10.1038/ismej.2008.38
Abstract | Full Text | PDF | Supplementary information
April 17 2008
Selection of bacterial populations in the mycosphere of Laccaria proxima: is type III secretion involved?
Jan Aaldrik Warmink and Jan Dirk van Elsas
ISME J advance online publication, April 17, 2008; doi:10.1038/ismej.2008.41
February 28 2008
Response of fermentation and sulfate reduction to experimental temperature changes in temperate and Arctic marine sediments
Niko Finke and Bo Barker Jørgensen
ISME J advance online publication, February 28, 2008; doi:10.1038/ISMEJ.2008.20
