Abstract
TMKS8A (1), a new chlorinated α-lapachone derivative, along with five known related metabolites, A80915 C (2), SF2415B1 (3), chlorinated dihydroquinone 3 (4), SF2415B3 (5), and A80915 C (6), were identified from the culture extract of Streptomyces sp. TMKS8, which was isolated from a sea slug, Paromoionchis tumidus. The structure of 1 was determined by the analysis of NMR and MS spectral data, assisted by NMR chemical shift prediction using DFT-based calculation. The absolute configuration was determined to be R by comparison of experimental and calculated ECD spectra. Compound 1 displayed antimicrobial activity against Gram-positive bacteria with MIC values ranging from 6.25 to 12.5 μg ml−1 and cytotoxicity against murine leukemia P388 cells with IC50 9.8 μM.
This is a preview of subscription content, access via your institution
Access options
Subscribe to this journal
Receive 12 print issues and online access
$259.00 per year
only $21.58 per issue
Buy this article
- Purchase on Springer Link
- Instant access to full article PDF
Prices may be subject to local taxes which are calculated during checkout
References
Pereira F. Have marine natural product drug discovery efforts been productive and how can we improve their efficiency? Expert Opin Drug Discov. 2019;14:717–22.
Wiese J, Imhoff JF. Marine bacteria and fungi as promising source for new antibiotics. Drug Dev Res. 2019;80:24–7.
Blunt JW, Carroll AR, Copp BR, Davis RA, Keyzers RA, Prinsep MR. Marine natural products. Nat Prod Rep. 2018;35:8–53.
Sibero MT, et al. Two new aromatic polyketides from a sponge-derived Fusarium. Beilstein J Org Chem. 2019;15:2941–7.
Carroll AR, Copp BR, Davis RA, Keyzers RA, Prinsep MR. Marine natural products. Nat Prod Rep. 2019;36:122–73.
Carroll AR, Copp BR, Davis RA, Keyzers RA, Prinsep MR. Marine natural products. Nat Prod Rep. 2020;37:175–223.
Silva TR, et al. Bacteria from Antarctic environments: diversity and detection of antimicrobial, antiproliferative, and antiparasitic activities. Polar Biol. 2018;41:1505–19.
Sharma AR, Zhou T, Harunari E, Oku N, Trianto A, Igarashi Y. Labrenzbactin from a coral-associated bacterium Labrenzia sp. J Antibiot. 2019;72:634–9.
Wu SM, Liu G, Zhou SN, Sha ZX, Sun CM. Characterization of antifungal lipopeptide biosurfactants produced by marine bacterium Bacillus sp. CS30. Mar Drugs. 2019;17:199.
Zhang ZW, Zhou T, Harunari E, Oku N, Igarashi Y, Iseolides A–C. antifungal macrolides from a coral-derived actinomycete of the genus Streptomyces. J Antibiot. 2020;73:534–41.
Wang E, Sorolla MA, Krishnan PDG, Sorolla A. From seabed to bedside: a review on promising marine anticancer compounds. Biomolecules. 2020;10:248.
Indraningrat AAG, Smidt H, Sipkema D. Bioprospecting sponge-associated microbes for antimicrobial compounds. Mar Drugs. 2016;14:87.
Adnan M, Alshammari E, Patel M, Ashraf SA, Khan S, Hadi S. Significance and potential of marine microbial natural bioactive compounds against biofilms/biofouling: necessity for green chemistry. PeerJ. 2018;6:e5049.
Fenical W. Marine microbial natural products: the evolution of a new field of science. J Antibiot. 2020;7:481–7.
Cristianawati O, et al. Screening of antibacterial activity of seagrass-associated bacteria from the North Java Sea, Indonesia against multidrug-resistant bacteria. AACL Bioflux. 2019;12:1054–64.
Ayuningrum D, et al. Tunicate-associated bacteria show a great potential for the discovery of antimicrobial compounds. PLoS One. 2019;14:e0213797.
Kristiana R, et al. Antibacterial potential of nudibranch-associated bacteria from Saparua and Nusa Laut Islands, Indonesia. Biodiversitas. 2019;20:1811–9.
Sibero MT, et al. Antibacterial activity of Indonesian sponge-associated fungi against clinical pathogenic multidrug-resistant bacteria. J Appl Pharm Sci. 2018;8:088–94.
Hanif N, Murni A, Tanaka C, Tanaka J. Marine natural products from Indonesian waters. Mar Drugs. 2019;17:364.
Tanaka J. How can we develop marine natural products chemistry in Indonesia? J Phys Conf Ser. 2020;1460:012079.
Sabdaningsih A, et al. A new citrinin derivative from the Indonesian marine aponge-associated fungus Penicillium citrinum. Mar Drugs. 2020;18:227.
Sibero MT, et al. Sponge-associated fungi from a mangrove habitatin Indonesia: species composition, antimicrobial activity, enzyme screening and bioactive profiling. Int Aquat Res. 2019;11:173–86.
Sibero MT, et al. Chromanone-type compounds from marine sponge-derived Daldinia eschscholtzii KJMT FP 4.1. J Appl Pharm Sci. 2020;10:1–7.
Farnaes L, et al. Napyradiomycin derivatives, produced by a marine-derived actinomycete, illustrate cytotoxicity by induction of apoptosis. J Nat Prod. 2014;77:15–21.
Motohashi K, Sue M, Furihata K, Ito S, Seto H. Terpenoids produced by actinomycetes: napyradiomycins from Streptomyces antimycoticus NT17. J Nat Prod. 2008;71:595–601.
Cheng YB, Jensen PR, Fenical W. Cytotoxic and antimicrobial napyradiomycins from two marine-derived Streptomyces strains. Eur J Org Chem. 2013;3751–7.
Lodewyk MW, Siebert MR, Tantillo DJ. Computational prediction of 1H and 13C chemical shifts: a useful tool for natural product, mechanistic, and synthetic organic chemistry. Chem Rev. 2012;112:1839–62.
Wu ZC, et al. Antibacterial and cytotoxic new napyradiomycins from the marine-derived Streptomyces sp. SCSIO 10428. Mar Drugs. 2013;11:2113–25.
MacroModel, Schrödinger, LLC: New York, NY, 2020.
Gaussian 16, Revision B.01; Gaussian, Inc.: Wallingford, CT, 2016.
Karim MRU, Harunari E, Oku N, Akasaka K, Igarashi Y. Bulbimidazoles A-C antimicrobial and cytotoxic alkanoyl imidazoles from a marine gammaproteobacterium Microbulbifer species. J Nat Prod.2020;83:1295–9.
Sugimura N, Furuya A, Yatsu T, Shibue T. Application of density functional theory (DFT) and empirical scaling to practical prediction of 13C-NMR of (−)-napyradiomycin A1. Bunseki Kagaku. 2015;64:147–50.
Shepherd ED, et al. Structure determination of a chloroenyne from Laurencia majuscula using computational methods and total synthesis. J Org Chem. 2019;84:4971–91.
Braddock DC, Rzepa HS. Structural reassignment of obtusallenes V, VI, and VII by GIAO-based density functional prediction. J Nat Prod. 2008;71:728–30.
Acknowledgements
P388 cells were obtained from JCRB Cell Bank under an accession code JCRB0017 (Lot. 06252002). We thank Mr. Tatsuya Matsui and Mr. Yiwei Ge at Toyama Prefectural University for cytotoxicity assay.
Author information
Authors and Affiliations
Corresponding author
Ethics declarations
Conflict of interest
The authors declare no competing interests.
Additional information
Publisher’s note Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.
Supplementary information
Rights and permissions
About this article
Cite this article
Zhang, Z., Sibero, M.T., Kai, A. et al. TMKS8A, an antibacterial and cytotoxic chlorinated α-lapachone, from a sea slug-derived actinomycete of the genus Streptomyces. J Antibiot 74, 464–469 (2021). https://doi.org/10.1038/s41429-021-00415-4
Received:
Revised:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1038/s41429-021-00415-4