Abstract
The present purification protocol applies to target proteins that are fused to a double tag, such as NusA–His6, through a linker that includes a protease-recognition sequence. It involves two steps of immobilized metal ion affinity chromatography (IMAC). NusA stabilizes the passenger protein during translation, whereas the His-tag enables affinity purification of the fusion. The eluate resulting from the first IMAC is buffer-exchanged to remove the imidazole and to achieve optimal conditions for the enzymatic cleavage performed by a His-tagged recombinant protease. The digested sample is loaded directly for a second IMAC step and the target protein is selectively recovered in the flow-through. The resin binds residual non-digested fusion protein, double-tagged moiety, protease and any contaminant that bound the affinity resin and was eluted from the first IMAC. The purity of the target protein usually makes a further purification step unnecessary for most of the lab applications. It takes less than 5 hours to purify the protein from a 5 g pellet.
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References
Waugh, D.S. Making the most of affinity tags. Trends Biotechnol. 23, 316–320 (2005).
Davis, G.D., Elisee, C., Newham, D.M. & Harrison, R.G. New fusion protein systems designed to give soluble expression in Escherichia coli. Biotechnol. Bioeng. 65, 382–388 (1999).
De Marco, V., Stier, G., Blandin, S. & de Marco, A. The solubility and stability of recombinant proteins is increased by their fusion to NusA. Biochem. Biophys. Res. Comm. 322, 766–771 (2004).
Saluta, M. & Bell, P.A. Troubleshooting GST fusion protein expression in E. coli. Life Sci. News 1, 1–3 (1998).
Kaplan, W. et al. Conformational stability of pGEX-expressed Schistosoma japonicum glutathione S-transferase: a detoxification enzyme and fusion-protein affinity tag. Protein Sci. 6, 399–406 (1997).
Nilsson, J. et al. Multiple affinity domains for the detection, purification and immobilization of recombinant proteins. J. Mol. Recognit. 9, 585–594 (1996).
Pryor, K.D. & Leiting, B. High-level expression of soluble protein in Escherichia coli using a His6-tag and maltose-binding protein double-affinity fusion system. Protein Expr. Purif. 10, 309–319 (1997).
Smith, P.A. et al. A plasmid expression system for quantitative in vivo biotinylation of thioredoxin fusion proteins in Escherichia coli. Nucleic Acids Res. 26, 1414–1420 (1998).
Nallamsetty, S., Austin, B.P., Penrose, K.J. & Waugh, D.S. Gateway vectors for the production of combinatorially-tagged His6–MBP fusion proteins in the cytoplasm and periplasm of Escherichia coli. Protein Sci. 14, 1435–1442 (2005).
Cabrita, L.D., Dai, W. & Bottomley, S.P. A family of E. coli expression vectors for laboratory scale and high throughput soluble protein production. BMC Biotechnol. 6, 12 (2006).
Dümmler, A., Lawrence, A.-M. & de Marco, A. Simplified screening for the detection of soluble constructs expressed in E. coli using a modular set of vectors. Microbial Cell Factories 4, 34 (2005).
Nominé, Y. et al. A strategy for optimizing the monodispersity of the fusion proteins: application to purification of recombinant HPV E6 oncoprotein. Prot. Eng. 14, 297–305 (2001).
de Marco, A., Vigh, L., Diamant, S. & Goloubinoff, P. Native folding of aggregation-prone recombinant proteins in Escherichia coli by osmolytes, plasmid- or benzyl alcohol over-expressed molecular chaperones. Cell Stress Chaperones 10, 329–339 (2005).
Kapust, R.B. et al. Tobacco etch virus protease: mechanism of autolysis and rational design of stable mutants with wild-type catalytic proficiency. Protein Eng. 14, 993–1000 (2001).
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de Marco, A. Two-step metal affinity purification of double-tagged (NusA–His6) fusion proteins. Nat Protoc 1, 1538–1543 (2006). https://doi.org/10.1038/nprot.2006.289
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DOI: https://doi.org/10.1038/nprot.2006.289
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