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N-terminal α-methylation of RCC1 is necessary for stable chromatin association and normal mitosis

Abstract

Regulator of chromatin condensation 1 (RCC1) is the only known guanine nucleotide-exchange factor for the Ran GTPase and has pivotal roles in nucleo-cytoplasmic transport, mitosis, and nuclear-envelope assembly1. RCC1 associates dynamically with chromatin through binding to histones H2A and/or H2B in a Ran-regulated manner2,3. Here, we report that, unexpectedly, the amino-terminal serine or proline residue of RCC1 is uniquely methylated on its α-amino group. Methylation requires removal of the initiating methionine, and the presence of proline and lysine at positions 3 and 4, respectively. Methylation-defective mutants of RCC1 bind less effectively than wild-type protein to chromatin during mitosis, which causes spindle-pole defects. We propose a bimodal attachment mechanism for RCC1 in which the tail promotes stable RCC1 association with chromatin through DNA binding in an α-N-methylation-dependent manner. These data provide the first known function for N-terminal protein methylation.

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Figure 1: RCC1 N-terminal methylation.
Figure 2: Identification of N-terminal methylation motif, α-N-terminal methyltransferase activity and detection of endogenous RCC1 N-terminal methylation.
Figure 3: Methylation of RCC1 regulates its interaction with chromosomes.
Figure 4: Methylation of RCC1 is required for correct spindle assembly and chromosome segregation.

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References

  1. Hetzer, M., Gruss, O. J. & Mattaj, I. W. The Ran GTPase as a marker of chromosome position in spindle formation and nuclear envelope assembly. Nature Cell Biol. 4, E177–E184 (2002).

    Article  CAS  PubMed  Google Scholar 

  2. Nemergut, M. E., Mizzen, C. A., Stukenberg, T., Allis, C. D. & Macara, I. G. Chromatin docking and exchange activity enhancement of RCC1 by histones H2A and H2B. Science 292, 1540–1543 (2001).

    Article  CAS  PubMed  Google Scholar 

  3. Li, H. Y., Wirtz, D. & Zheng, Y. A mechanism of coupling RCC1 mobility to RanGTP production on the chromatin in vivo. J. Cell Biol. 160, 635–644 (2003).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  4. Renault, L., Kuhlmann, J., Henkel, A. & Wittinghofer, A. Structural basis for guanine nucleotide exchange on Ran by the regulator of chromosome condensation (RCC1). Cell 105, 245–255 (2001).

    Article  CAS  PubMed  Google Scholar 

  5. Talcott, B. & Moore, M. S. The nuclear import of RCC1 requires a specific nuclear localization sequence receptor, karyopherin α3/Qip. J. Biol. Chem. 275, 10099–10104 (2000).

    Article  CAS  PubMed  Google Scholar 

  6. Nemergut, M. E. & Macara, I. G. Nuclear import of the Ran exchange factor, RCC1, is mediated by at least two distinct mechanisms. J. Cell Biol. 149, 835–850 (2000).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  7. Moore, W., Zhang, C. & Clarke, P. R. Targeting of RCC1 to chromosomes is required for proper mitotic spindle assembly in human cells. Curr. Biol. 12, 1442–1447 (2002).

    Article  CAS  PubMed  Google Scholar 

  8. Hutchins, J. R. et al. Phosphorylation regulates the dynamic interaction of RCC1 with chromosomes during mitosis. Curr. Biol. 14, 1099–1104 (2004).

    Article  CAS  PubMed  Google Scholar 

  9. Li, H. Y. & Zheng, Y. Phosphorylation of RCC1 in mitosis is essential for producing a high RanGTP concentration on chromosomes and for spindle assembly in mammalian cells. Genes Dev. 18, 512–527 (2004).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  10. Mosammaparast, N. et al. Nuclear import of histone H2A and H2B is mediated by a network of karyopherins. J. Cell Biol. 153, 251–262 (2001).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  11. Jenuwein, T. & Allis, C. D. Translating the histone code. Science 293, 1074–1080 (2001).

    CAS  PubMed  Google Scholar 

  12. Kai, R., Ohtsubo, M., Sekiguchi, M. & Nishimoto, T. Molecular cloning of a human gene that regulates chromosome condensation and is essential for cell proliferation. Mol. Cell Biol. 6, 2027–2032 (1986).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  13. Stock, A., Clarke, S., Clarke, C. & Stock, J. N-terminal methylation of proteins: structure, function and specificity. FEBS Lett 220, 8–14 (1987).

    Article  CAS  PubMed  Google Scholar 

  14. Kalab, P., Pralle, A., Isacoff, E. Y., Heald, R. & Weis, K. Analysis of a RanGTP-regulated gradient in mitotic somatic cells. Nature 440, 697–701 (2006).

    Article  CAS  PubMed  Google Scholar 

  15. Caudron, M., Bunt, G., Bastiaens, P. & Karsenti, E. Spatial coordination of spindle assembly by chromosome-mediated signaling gradients. Science 309, 1373–1376 (2005).

    Article  CAS  PubMed  Google Scholar 

  16. Sluder, G., Thompson, E. A., Miller, F. J., Hayes, J. & Rieder, C. L. The checkpoint control for anaphase onset does not monitor excess numbers of spindle poles or bipolar spindle symmetry. J. Cell Sci. 110, 421–429 (1997).

    CAS  PubMed  Google Scholar 

  17. Chen, A. E., Ginty, D. D. & Fan, C. M. Protein kinase A signalling via CREB controls myogenesis induced by Wnt proteins. Nature 433, 317–322 (2005).

    Article  CAS  PubMed  Google Scholar 

  18. Perche, P. Y. et al. Higher concentrations of histone macroH2A in the Barr body are correlated with higher nucleosome density. Curr. Biol. 10, 1531–1534 (2000).

    Article  CAS  PubMed  Google Scholar 

  19. Brownawell, A. M., Kops, G. J., Macara, I. G. & Burgering, B. M. Inhibition of nuclear import by protein kinase B (Akt) regulates the subcellular distribution and activity of the forkhead transcription factor AFX. Mol. Cell Biol. 21, 3534–3546 (2001).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  20. Chen, T., Brownawell, A. M. & Macara, I. G. Nucleocytoplasmic shuttling of JAZ, a new cargo protein for exportin-5. Mol. Cell Biol. 24, 6608–6619 (2004).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  21. Martin, S. E., Shabanowitz, J., Hunt, D. F. & Marto, J. A. Subfemtomole MS and MS/MS peptide sequence analysis using nano-HPLC micro-ESI fourier transform ion cyclotron resonance mass spectrometry. Anal. Chem. 72, 4266–4274 (2000).

    Article  CAS  PubMed  Google Scholar 

  22. Syka, J. E., Coon, J. J., Schroeder, M. J., Shabanowitz, J. & Hunt, D. F. Peptide and protein sequence analysis by electron transfer dissociation mass spectrometry. Proc. Natl Acad. Sci. USA 101, 9528–9533 (2004).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  23. Dignam, J. D., Lebovitz, R. M. & Roeder, R. G. Accurate transcription initiation by RNA polymerase II in a soluble extract from isolated mammalian nuclei. Nucleic Acids Res. 11, 1475–1489 (1983).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

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Acknowledgements

We thank members of the Macara laboratory for helpful suggestions, especially G. Riddick for conducting statistical tests. We also thank J. Nelson for MDCK cells stably expressing GFP–tubulin; S. Khochbin for GFP–H2A; L. Pemberton for core histones; R. Tsien for mRFP1; and T. Stukenberg, M. Smith and A. Spang for helpful suggestions and critical reading of the manuscript. This work was supported by grants from the National Institutes of Health (NIH) to I.G.M (GM070902, CA040042) and D.F.H. (GM37537).

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Contributions

T.C. made the RCC1 mutant proteins, identified the methyltransferase activity and its recognition motif, and performed the assays to identify its function. T.L.M. and J.S. performed the mass spectrometry. C.E.S.-T. made the antibodies against methylated RCC1 and performed the experiments with them. D.F.H. directed the mass spectrometry. I.G.M. directed the biochemical and cell biological studies. T.C. and I.G.M. wrote the paper. All authors discussed results and contributed to the manuscript.

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Correspondence to Ian G. Macara.

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The authors declare no competing financial interests.

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Supplementary Figures S1, S2, S3, S4, S5 and Supplementary Table S1 (PDF 605 kb)

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Chen, T., Muratore, T., Schaner-Tooley, C. et al. N-terminal α-methylation of RCC1 is necessary for stable chromatin association and normal mitosis. Nat Cell Biol 9, 596–603 (2007). https://doi.org/10.1038/ncb1572

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