Collection 

Biochemistry and biophysics of biological clocks

Submission status
Open
Submission deadline

Structural, biochemical and biophysical descriptions of clock proteins and their molecular complexes have provided important mechanistic insights into how conformational changes, protein-protein interactions, coenzyme binding, proteasomal degradation, posttranslational modifications, chromatin modifications, and macromolecular (dis)assembly generate and entrain circadian rhythms. High-resolution 3D-structures of mammalian clock proteins and complexes are instrumental for the development of small molecules that target them, both to manipulate clock function and treat clock-associated pathologies. Delineating the molecular and physicochemical interplay of the circadian oscillator with external signals (e.g. light, temperature) and other cellular pathways is vital for understanding the input pathways that allow entrainment to environmental cycles and the output pathways that coordinate a diverse array of rhythmic physiologies important for health.

While insect and mammalian clock components are partially conserved, cyanobacteria, plants and the fungus Neurospora crassa have completely different clock architectures than animals. Structural, biochemical and biophysical studies in these and other clock systems are key to i) elucidating molecular mechanisms that underlie the 24 h phosphorylation timer of the cyanobacterial KaiABC complex, ii) revealing fundamental molecular principles generating rhythmicity in diverse organisms and iii) helping to develop and diversify applications in medicine and agriculture.

We invite research articles and reviews dealing with structural, biochemical and/or biophysical in vitro studies on clock- and clock-related targets, that provide mechanistic insights into their molecular interactions, activities (e.g. light-sensing, enzymatic reactions, cellular transport), functional regulation (e.g. by PTMs, light, pH, temperature, redox changes), and impact on other cellular functions (e.g. integration to cellular metabolism, cell cycle, neuronal firing). We welcome studies on clock proteins involved in biological timing mechanisms of any organism.

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3D CG rendered image of scientifically accurate Bacteriophage HK97 virus capsid Structure based on PDB : 1OHG (ribbon zoomed view)

Editors

  • Eva Wolf, PhD

    Johannes Gutenberg University Mainz, Institute of Molecular Physiology, Germany

  • Masao Doi, PhD

    Kyoto University, Japan

The Collection will publish original research Articles, and Commentary such as Reviews, Perspectives, and Comments (full details on content types can be found here). Papers will be published in npj Biological Timing and Sleep as soon as they are accepted and then collected together and promoted on the Collection homepage. All Guest Edited Collections are associated with a call for papers and are managed by one or more of our Editorial Board Members and the journal's Editors.

This Collection welcomes submissions from all authors – and not by invitation only – on the condition that the manuscripts fall within the scope of the Collection and of npj Biological Timing and Sleep more generally. See our editorial process page for more details.

All submissions are subject to the same peer review process and editorial standards as regular npj Biological Timing and Sleep articles, including the journal’s policy on competing interests. The Guest Editors have no competing interests with the submissions, which she handles through the peer-review process. The peer review of any submissions for which the Guest Editors have competing interests is handled by another Editorial Board Member who has no competing interests. See our Collections guidelines for more details.

This Collection is not supported by sponsorship.