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Droplet scRNA-seq is not zero-inflated

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Fig. 1: Comparing observed with expected zeros in scRNA-seq data.


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I thank E. da Veiga Beltrame for feedback on the manuscript, G. Eraslan for making fast code for fitting negative binomial models available, and the scientific community on Twitter for suggesting writing up this analysis as a manuscript. V.S. was funded in part by the EMBL International PhD Programme and NIH U19MH114830.

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Correspondence to Valentine Svensson.

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Supplementary Methods and Supplementary Figs. 1 and 2

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Svensson, V. Droplet scRNA-seq is not zero-inflated. Nat Biotechnol 38, 147–150 (2020).

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