Emitted from the oceans, iodine-bearing molecules are ubiquitous in the atmosphere and a source of new atmospheric aerosol particles of potentially global significance. However, its inclusion in atmospheric models is hindered by a lack of understanding of the first steps of the photochemical gas-to-particle conversion mechanism. Our laboratory results show that under a high humidity and low HOx regime, the recently proposed nucleating molecule (iodic acid, HOIO2) does not form rapidly enough, and gas-to-particle conversion proceeds by clustering of iodine oxides (IxOy), albeit at slower rates than under dryer conditions. Moreover, we show experimentally that gas-phase HOIO2 is not necessary for the formation of HOIO2-containing particles. These insights help to explain new particle formation in the relatively dry polar regions and, more generally, provide for the first time a thermochemically feasible molecular mechanism from ocean iodine emissions to atmospheric particles that is currently missing in model calculations of aerosol radiative forcing.
The impacts of iodine on tropospheric and stratospheric chemistry were anticipated by seminal work published in the 80s and 90s1,2. The characterization of global iodine sources3,4 and the demonstration of its ubiquitous presence in the marine boundary layer (MBL)5,6, the free troposphere7,8, and the stratosphere9 have enabled an assessment of the important role of iodine in O3 depletion in past, present, and future climate scenarios5,9,10,11,12,13,14,15. Iodine oxide-driven new particle formation was first observed in mid-latitude coastal locations16,17,18. Its high nucleation and growth rates may enable new iodine particles to survive fast scavenging by background aerosol19 and to develop into sea mist and fog20. Iodine oxide particles (IOPs) have also been observed in the polar MBL21,22,23. Field observations in diverse locations with completely different meteorological and chemical conditions suggest a wider relevance of this phenomenon in the global atmosphere.
Laboratory studies have investigated the effect of different environmental variables on nm-sized IOPs17,24,25,26. For example, both high temperature and humidity slow down IOP growth and reduce IOP number density relative to colder/drier conditions24,26. The I2O3 and I2O4 molecules have been observed in the laboratory and linked to IOP formation in dry conditions27. However, the O/I ratio measured in the particles collected has been shown to be closer to I2O526. I2O5 is the anhydride form of iodic acid (HOIO2), which is the proposed composition of liquid IOPs in the humid MBL28. Recently, field observations of IO3− and HIO3− containing cluster anions by chemical ionization–atmospheric pressure interface–time-of-flight mass spectrometry (CI-API-ToF-MS) have been reported23. These observations, which employ nitrate (NO3−) and acetate (CH3COO−) reagent ions for reaction with the analytes, have been interpreted as resulting from atmospheric gas-phase HOIO2 and molecular cluster formation via HOIO2 addition steps. Well-established gas-phase kinetics and thermochemistry do not indicate any straightforward route to HOIO2. The OIO + OH reaction is predicted to yield HOIO229, but the concentration of OH in the MBL is far too low to explain IOP formation. It has been proposed that water plays an important role in generating HOIO2 and IOPs23,30, although a strong anticorrelation between particle production probability and water vapor has been observed in the field31. In order to form HOIO2, H2O must be able to intercept some of the initial products of the reaction between atomic iodine and O3, i.e., IOx (I, IO, and OIO) or I2Oy. The bimolecular reactions of IOx with H2O are precluded by their large endothermicities, and termolecular reactions form only weakly bound clusters32. A reaction of any of these H2O…IOx adducts with O3 to form oxyacids requires substantial bond rearrangement and barriers are expected. Recent ab initio studies have found a substantial barrier in the potential energy surface (PES) of the I2O5 + H2O ↔ 2HOIO2 reaction30,33, precluding not only formation of HOIO2 but also a nucleation mechanism depending on the formation of I2O5 from the HOIO2 self-reaction23,30.
Here, we present results from flow tube kinetic experiments in order to fill the knowledge gap between gas-phase atmospheric iodine molecules and IOPs. Our results show that water reacts very slowly with atomic iodine and iodine oxides, and that forming particulate HOIO2 does not require gas-phase HOIO2, implying a limited role of oxyacids in IOP formation, which is instead initiated by clustering of IxOy. Based on our experiments and calculations, an iodine gas-to-particle conversion mechanism is proposed.
Pulsed laser photolysis experiments
We have carried out laboratory flow tube kinetic experiments to look at IOP formation and evaporation (see “Methods” and Supplementary Figs. 1 and 2) starting from standard chemistry (Supplementary Table 1). Figure 1a shows an average of mass spectra recorded for time delays of up to 20 ms between 248 nm pulsed laser photolysis (PLP) of a mixture of O3 and I2 at 10 Torr of N2, and 10.5 eV photoionization (PI). This “dry” spectrum shows positive ion peaks generated by near-threshold PI (Supplementary Table 2) of known neutral iodine species: I+ (m/z = 127), IO+ (143), OIO+ (159), I2+ (254), I2O+ (270), I2O2+ (286), I2O3+ (302), and I2O4+ (318). A peak corresponding to I2O5+ (m/z = 334) is absent. The predicted vertical ionization potential of I2O5 is 11.4 eV, but this molecule is not observed with the 11.6 eV PI beam either, as shown in Fig. 2. The major peaks of the higher m/z progressions observed in Fig. 1a are I3O7+ (493), I5O12+ (827), I7O17+ (1161), I9O22+ (1495), I11O27+ (1829), and I13O32+ (2163). Minor peaks which indicate up to four missing oxygen atoms are also observed. Starting from I3O7+ and moving to higher m/z, the peaks are separated by I2O5 units (Fig. 1b), even though gas-phase I2O5 does not appear to form. The chemical composition of the main and last peak of each progression can be described as (I2O5)nOIO+. Molecular clusters with even numbers of iodine atoms (I4O7+, I4O9+) are also detected but are very minor.
A succession of peaks in a mass spectrum does not necessarily reveal how a nucleation mechanism works. Laboratory time-resolved multiplexed experiments (Fig. 3) provide the sequence of reactions and are therefore essential to interpret mass spectra obtained in the field or in the chamber or flow tube steady-state experiments. The initial growth of the concentration versus time curves is generally faster for smaller iodine-bearing molecules, and the peak concentrations are reached in the following order: IO → OIO → I2O3 → I2O4 → I3O7 → I5O12 → I7O17 → I9O22, etc. (see kinetic analysis in Fig. 4). The kinetic traces indicate that I2Oy form I3Oy species preferentially over I4Oy adducts (I4Oy photofragmentation to form I3Oy+ + IOx would occur well above 10.5 eV, Supplementary Table 2). At longer time delays between PLP and PI, all peaks with the number of iodine atoms x ≤ 2 show kinetic growth at a similar rate compared with the larger clusters, indicating that the latter fragment into smaller constituent subunits following PI. This growth occurs at earlier delay times when the initial concentration of IO is higher (higher excimer laser energy or higher O3 concentration, Supplementary Fig. 3) and/or the PI energy is higher. Because of the second-order reactions involved, starting with the IO self-reaction34, the formation and removal time scales of IxOy depend on the initial concentration of IO, which itself depends on the fraction of O3 photolyzed. Thus, for high IO, IxOy clustering is fast and a dominant sink compared to other slow reactions.
Addition of water (mixing ratio x(H2O) = 2%) at 10 Torr results in a limited reduction of the OIO+ and IxOy+ signals (Fig. 1c). No reaction products are detected, except for the peak at m/z = 144, i.e., HOI+; this results from OH scavenging by I2, which also prevents any further HOx chemistry. The mass peak progressions in the presence of water remain the same: neither HOIO2 nor HOIO2-containing peaks (e.g., (I2O5)n(HIO3)0–223) are observed, and no clusters with an even number of iodine atoms emerge. The calculated ionization potential of HOIO2 is 11.3 eV, yet again no signal is observed on a time scale of 4 ms when the PI beam is tuned to 11.6 eV (Fig. 2). Regarding larger oxyacid-containing clusters, the PI threshold is expected to decrease as the size of a cluster increases, and therefore they should photoionize or even photofragment at 10.5 eV. Thus, any hypothetical IxOy + H2O reaction forming HOIO2 occurs at a slower rate than the IxOy clustering reactions under these conditions. Given the lack of reaction products upon addition of water, the limited decrease of the IxOy signals indicates that water partially inhibits the formation of large clusters, which results in a reduction of the photofragmentation signal.
Observing slow reactions requires increasing the concentration of the excess reactant (H2O) and minimizing the effect of competitive reactions. At 350 Torr and x(H2O) = 2%, for PLP-PI delays of up to 5 ms, the peaks observed at low pressure in the mass spectrum remain, and oxyacid clusters do not appear (Fig. 2). The minor peaks at m/z = 177 (H2IO3+) and m/z = 335 (HI2O5+) do not exhibit kinetic change and are decoupled from photolysis-induced chemistry. Thus, they probably result from photofragmentation of large H2O…IxOy clusters or are produced from deposits around the ToF-MS skimmer.
Continuous broadband photolysis (BBP) experiments
We have also performed high-pressure steady-state experiments using continuous BBP. In these experiments, a residence time of a few seconds combined with continuous generation of I atom and high pressure should help in enhancing the concentration of slow-reaction products. Yet again, oxyacid products are not observed under these conditions (Fig. 2). Upper limits for the rate constants of possible HOIO2-forming reactions can be obtained from kinetic modeling of our BBP experiments, and are discussed below. Separate flow tube measurements of atomic iodine by resonance fluorescence (ROFLEX)35 were performed to study the removal of I atoms in the presence of MBL-representative concentrations of O3 and H2O at 760 Torr. A slight enhancement of the I atom removal by O3 in the presence of water was observed (Supplementary Fig. 4), which yields an effective rate constant of k(I + H2O + O3) = (2.9 ± 1.0) × 10−19 cm3 s−1 molecule−1 for x(O3) = 92 ppbv and k(I + H2O + O3) = (2.0 ± 0.5) × 10−18 cm3 s−1 molecule−1 for x(O3) = 184 ppbv.
Visual inspection of the BBP experiment through a viewport revealed a plume of smoke formed at the I2 inlet under dry conditions (Supplementary Movie 1), which was quenched upon addition of H2O. That is, water appears to hinder nucleation, rather than promoting it by forming HOIO2. The observation of HOIO2 evaporated from particles by resistive heating demonstrates the capability of detecting this molecule by PI-ToF-MS at 11.6 eV and provides insights into the formation of particulate HOIO2 (Fig. 5). BBP of I2/O3 mixtures at room temperature generates IxOy and IOPs that travel for a few seconds down the flow tube toward the detection region. A few millimeters upstream of the sampling volume, the carrier gas and the particles are resistively heated (Supplementary Fig. 2) in order to observe evaporation products. The current through the filament was set to a value such that the IxOy molecules carried by the gas thermally dissociated in the absence of water (disappearance of the higher mass peaks). Thus, the observed HOIO2 and HOI cannot be products of gas-phase high-temperature IxOy + H2O reactions, but evaporation products of IOPs formed upstream in the presence of water. Under dry conditions, the oxyacid evaporation signals reduce drastically. The other effect of heating IOPs is the expected thermal decomposition of solid/liquid-phase iodine oxides into molecular oxygen and iodine36,37 (enhancement of the I2 signal).
Iodine oxide particle-formation mechanism
The chemistry initiating the formation of iodine oxide clusters and particles is reasonably well known (Supplementary Table 1). Therefore, deviations from the phenomenological growth and decay of IO and OIO documented in previous work34,38 are considered as a sign of fragmentation, especially if the IO and OIO traces track the growth of larger molecules and clusters. Data at high IOx concentration clearly suffer from this problem (e.g., experiments #2 and #3 in Supplementary Fig. 3) and cannot be used for kinetic analysis, but it must be pointed out that all datasets are affected to some extent at long delay times. Some of the fragmentation energies of large molecules listed in Supplementary Table 2 are just slightly higher than 10.5 eV or even lower. Two-photon processes may also occur like in the case of water (see “Methods”), although the reason why water is observed by resonance-enhanced multiphoton ionization (REMPI) with an unfocused laser beam is likely related to the high concentrations employed, orders of magnitude higher than the concentrations of IxOy.
The I2O+ signal that is consistently detected in all experiments may originate from an I2O parent neutral rather than from fragmentation, possibly from a bimolecular reaction between IO and the products of its self-reaction. The observation of I2O2+ is consistent with IOIO being one of the major products of the IO self-reaction34,38, although the signal is very low even in the high-pressure experiments, which may indicate some fragmentation to IO+, or a small PI cross section. I2O3+ and I2O4+ can be linked to the corresponding neutrals, which are known products of the IO + OIO and OIO + OIO reactions. The main cluster progressions observed are separated by Δ(m/z) = 334 (I2O5), while I2O5 itself does not appear to form. Thus, I2O2, I2O3, and I2O4 are considered to be the precursors to iodine oxide molecular clusters. However, they do not appear to aggregate stepwise to form clusters. The ion clusters detected have the specific elemental composition I2n+1O5n+m+ (n ≥ 1, m = 0, 1, 2), i.e., odd numbers of iodine atoms. By looking at Supplementary Table 2, it can be seen that while I4Oy species may fragment to smaller ions, they cannot fragment to I3Oy+, and therefore we assume that the latter corresponds to I3Oy molecules formed in the flow tube.
There are many possible reactions that may generate the observed peaks in the PI mass spectra. Thermochemical data are required to eliminate irrelevant reactions from the chemical mechanism (Table 1). Reactions deemed to be endothermic or forming weakly bound adducts based on our calculations are excluded. For example, I2Oy form generally weak adducts with themselves, and this may explain why the I4Oy signals are negligible and, as a consequence, clusters with even numbers of iodine atoms do not form32. The most stable predicted adduct is I4O8, formed from the I2O4 self-reaction. However, our ab initio calculations suggest that this reaction also has an exothermic bimolecular channel making I3O7. Alternative routes to I3Oy are I2Oy + IOx (y ≠ 3) followed by ozone-oxidation steps. Ozone has been found not to be required to form IOPs as long as an alternative source of oxygen atoms is available, but its presence leads to enhanced particle formation26. Thus, it could help in increasing the O/I ratio within each peak progression if the peaks with lower O/I form first from I2Oy + IOx.
I2O3, in particular, does not form stable adducts with other IOx and I2Oy (including itself)32, and we have not found any exothermic bimolecular reaction between I2O3 and IOx or I2Oy (Table 1). However, I2O3 does not accumulate in the flow tube, as shown in Fig. 4 and Supplementary Fig. 3. Therefore, we assume that it undergoes clustering with larger IxOy. Further ab initio calculations are required to investigate if this is the actual fate of I2O3.
The list of reactions added to the initial chemistry in Supplementary Table 1 are listed in Table 2. The rate constants of the selected reactions are then adjusted to model the fast formation and decay of the IxOy species, as shown in Fig. 4 (see the section “Kinetic Analysis” in “Methods”). Some reactions are grouped and assumed to have the same rate coefficient. Some rate coefficients are floated by the least-squares algorithm, while some others are changed manually. Not all coefficients can be allowed to float at the same time. Finding a reasonable result implies a few iterations. The criterion is always to minimize the difference between the measured traces and the simulations.
The rapid kinetics and smoke formation are astonishing, considering that the pressure is relatively low and that all reactions are second order. Removal rates of ~50 s−1 with concentrations of 1011 molecule cm−3 (Fig. 4 and Supplementary Fig. 3) involve rate constants of the order of 5 × 10−10 cm3 s−1 molecule−1. These are likely to be enabled by the large dipole moments characteristic of iodine oxides32 inducing long-range capture forces. Kinetic modeling efforts are rendered semi-quantitative at this point by the unknown contribution of fragmentation of large clusters to the smaller molecules. However, a reasonable global fit to all available traces (Fig. 4) may be obtained using standard chemistry (Supplementary Table 1) and the combination of clustering and bimolecular reactions listed in Table 2. In this IxOy nucleation mechanism, rapid pressure-independent bimolecular reactions between IxOy molecular clusters form larger clusters with the observed odd numbers of iodine atoms ((I2O5)nOIO), e.g.:
In addition, third-body reactions at their high-pressure limit form aggregates, e.g.:
where the O/I ratio of the aggregates may be subsequently increased through oxidation by O3. HOIO2-containing clusters23 have not been observed, and therefore no attempt has been made to model them.
Constraints to iodic acid-formation rates
Possible sources of gas-phase HOIO and HOIO2 are reactions of IOx and I2Oy with water listed in Table 1. We have carried out high-level ab initio calculations to explore the transition states toward oxyacid formation from I2Oy + H2O (y = 2, 3). The gas-phase I2O2 reaction (Supplementary Fig. 5) is more favorable than the I2O3 reaction (Supplementary Fig. 6), while the I2O4 reaction30 presents a small barrier (Supplementary Fig. 7). We have also hypothesized that wall reactions of iodine oxides with adsorbed H2O may be an additional source of oxyacids in long-residence time experiments and field instruments with long inlets. However, Born–Oppenheimer molecular simulations (BOMD) rule out I2Oy reactions in the air-water interface (see “Methods”).
We have selected five exothermic reactions producing oxyacids listed in Table 1 in order to determine their rate constants from the experimental data and from our ab initio calculations. Active addition of high water concentrations in our BBP experiments at a PI energy of 11.6 eV does not result in a detectable signal of HOIO2. Moreover, the co-products of these reactions HOI and HOIO are very weak or absent from the BBP mass spectra obtained at 10.5 eV. This suggests that these reactions are slow and cannot compete under our experimental conditions with the reactions removing IxOy in the “dry” experiments. This, however, does not rule out the possibility that under atmospheric conditions, the situation reverses as a result of the low ambient IOx ([IOx] <109 cm−3 have been measured in the field, i.e., three to four orders of magnitude lower than in our BBP experiments) and higher water concentrations. Thus, upper limits to the rate constants of these reactions need to be determined as a first step to establish the relative importance of the oxide and oxyacid clusters. This has been done by kinetic modeling of our long-residence time BBP steady-state experiments at 10.5 eV and 11.6 eV PI energy, where each process in Table 3 is included separately in the numerical model with different values of the rate constant. The calculated concentrations of the oxyacid co-products after a time equal to the residence time in the flow tube are used to scale their simulated peaks, which have the typical mass resolution of the measured spectra in the m/z = 140–200 Da range. It is assumed that the PI cross section of each iodine oxyacid is equal to that of the nearest oxide. The upper limit of each rate constant k(IxOy + H2O) is taken to be that for which the simulated mass spectrometric signal at m/z = 144, m/z = 160, and/or m/z = 176 becomes indistinguishable from the background noise of the BBP experimental data. These upper limits can then be compared with rate constants calculated with the master equation solver MESMER39 using the molecular parameters (energies, vibrational frequencies, and rotational constants) derived from our ab initio calculations (Table 3).
A comparison between the simulated ion peaks and the observed mass spectra is shown in Fig. 6. Even though HOIO2 is not expected to be observable at 10.5 eV, the data obtained at this photon energy help in reducing the upper limit of the rate constant of the I2O2 and I2O3 reactions. First, the concentrations of these two oxides, in particular, are enhanced at high pressure (the IO + OIO and OIO + OIO rate constants reach their high-pressure limit)34. Second, the water concentration is one order of magnitude higher as a result of the higher pressure (the S/N ratio at 10.6 eV was not high enough to perform experiments above 30 Torr). The upper limits are listed in Table 3. For the I2O2 + H2O and I2O4 + H2O reactions, the rate constant cannot exceed, respectively, 1 × 10−19 cm3 s−1 molecule−1 and 5 × 10−19 cm3 s−1 molecule−1. The upper limit of k(I2O3 + H2O) is 5 × 10−18 cm3 s−1 molecule−1, but owing to the large barrier of the I2O3 + H2O reaction (Supplementary Fig. 6), its rate constant is expected to be at least one order of magnitude lower, as indicated by the master equation calculation included in Table 3. The I2O2 + H2O reaction and the I2O4 + H2O reaction (concerted path30) present, respectively, a submerged barrier of −7.5 kJ mol−1 (Supplementary Fig. 5) and a low barrier of 3.4 kJ mol−1 (Supplementary Fig. 7) at the CCSD(T)//M06-2X/aug-cc-pVDZ+LANL2DZ level of theory, which yields calculated rate constants higher than the estimated upper limits deduced from the experimental data.
The upper limit determined for the rate constant of a hypothetical composite reaction where atomic iodine complexes with water, and the resulting H2O…I adduct reacts with O3 to form oxyacids (Fig. 6a, e) can be compared with the rate constants obtained from the resonance fluorescence experiments on the removal of atomic iodine by O3 in the presence of water vapor. The enhanced removal of I by O3 in the presence of H2O observed with the ROFLEX for x(O3) = 92 ppbv (k(I + H2O + O3) = (2.9 ± 1.0) × 10−19 cm3 s−1 molecule−1) appears to agree with the upper limit determined from the ToF-MS experiments: k(I + H2O + O3) < 2.8 × 10−19 cm3 s−1 molecule−1. However, this is coincidental. The O3 concentration in the ToF-MS experiments was three orders of magnitude larger than in the ROFLEX experiments, indicating that the rate constant in the former should be, if linearly extrapolated from the ROFLEX result, of the order of 2.9 × 10−16 cm3 s−1 molecule−1, i.e., well above the detection limit of ~10−18 cm3 s−1 molecule−1. Thus, the yield of HOIO and HOIO2 from this process is <0.001, implying an oxyacid-formation rate constant of the order of 10−22 cm3 s−1 molecule−1 for atmospherically relevant O3 concentrations. Therefore, the composite I + H2O + O3 reaction is not a sufficiently fast source of HOIO2. This is very important because, as discussed in Supplementary Note 1, oxyacids can only be effective IOP nucleating species if their formation is decoupled from IxOy: otherwise, oxyacid nucleation needs to proceed through two slow second-order processes to form the first cluster. To explore the relative contribution of iodine oxides and oxyacids to the nucleation of IOPs, we have modeled a BBP flow tube experiment with longer residence time (200 s). Calculated rate constants of oxyacid–oxyacid and oxide–oxyacid aggregation and dissociation rates are listed in Supplementary Table 4. Modeled concentrations are presented in Supplementary Fig. 8 as a function of water vapor concentration ([H2O] concentrations between laboratory experiments23 and ambient). Despite the many assumptions involved in this exercise, a conclusion that can be drawn is that molecular clusters descending directly from HOIO and HOIO2 can only become dominant at high water concentration (>5 × 1016 molecule cm−3), and if the direct precursor of these oxyacids is atomic iodine. If the precursors of these oxyacids are oxides—which is more likely—nucleation is started by iodine oxides.
Our laboratory results strongly support an atmospheric gas-to-particle conversion mechanism where the initial clustering steps are driven by IxOy bimolecular and third-body reactions, both under dry and wet conditions. The mechanism of atmospheric IOP formation proposed in Fig. 7 is based on the set of reactions (Table 2) that best reproduces the time-resolved mass spectrometric data (Fig. 4) in the presence and absence of water, as described in the “Results” section. The IOP pyrolysis experiments show that HOI and HOIO2 are constituents of these particles, even though we did not observe them in the gas phase at room temperature, which implies that they are not indispensable IOP gas-phase precursors. This evidences the transformation of the IxOy clusters into oxyacid-containing clusters within the flow tube residence time, which confirms earlier predictions about the composition of I2O5 IOPs in the MBL28. This scenario is represented in Fig. 7 by the hydration of the I2O5 units present in the iodine oxide clusters with the composition (I2O5)nOIO. We reported previously that the number and the size of IOPs reduces when they are formed in the presence of water26. Particle capillary collapse following water uptake could not alone explain those observations. The attachment of water molecules to molecular clusters may have the effect of reducing cluster formation and particle coagulation rates. At the molecular cluster level of the mass spectrometric observations discussed here, the addition of water results in a consistent reduction of the intensity of all masses without concomitant formation of products, which we have interpreted as inhibition of photofragmentation of larger clusters. We found previously26,32 that the key iodine oxide I2O4 forms a relatively stable complex with water, such that under the conditions prevailing in the MBL, a large fraction of I2O4 molecules would be hydrated as I2O4…H2O (> 40%). This could block the I2O4 halogen-bonding sites, and the subsequent necessary geometrical rearrangement for the reaction of I2O4 with itself or with IxOy to proceed may result in barriers in the corresponding PES. The same may occur for larger molecular clusters. It should be noted that IxOy…H2O clusters are not observed in our experiments, which may be because they promptly dissociate following absorption of vacuum ultraviolet (VUV) photons.
A possible role of iodine in the formation and growth of new particles near the tropical tropopause has been proposed9. This would be favored by low water concentrations, but it must be noted that if the mixing ratios of IxOy are low, the clustering process slows down compared to photolysis (photolysis lifetimes of tens of seconds10,40 versus reaction lifetimes of hours, Supplementary Table 5). In mid-latitude coastal regions, particle production probability shows a strong negative correlation with water vapor fluxes and relative humidity31. This is consistent with our laboratory observations of water slowing down IOP formation26, and not consistent with a mechanism which results in a positive dependence on water vapor. In the polar MBL, active iodine (IOx) mixing ratios are in general lower than in macroalgae-rich mid-latitude locations5, and consequently lower IxOy mixing ratios should result in slower IOP formation rates (Supplementary Table 5). However, nucleation is likely to be favored not only by enhanced stability of molecular clusters at low temperature26 but also because the water content of the atmosphere is lower. In fact, nucleation events observed in the Arctic21 are coincident with periods of low RH.
Although we cannot rule out the formation of gas-phase HOIO2 (and HOIO) from I2Oy in the atmosphere (see lifetimes in Supplementary Table 5), we have shown that oxyacids are unlikely to be major nucleating species of IOPs. Moreover, we have evidence indicating that CI-API-ToF-MS IO3− signals attributed to gas-phase HOIO2 prior to reaction using two reagent ions—nitrate and acetate—may require some re-interpretation (see Supplementary Note 2 and Supplementary Table 3). Besides collisional fragmentation issues of this technique41, IO3− ions are exothermic reaction products of the dissociative charge transfer between I2Oy (y = 2, 3, 4) and NO3− (and CH3COO−), and therefore it is likely that I2Oy contributes significantly to the IO3− signal. The apparent paradox is that the IO3− CI-API-ToF measurements23 remains a very useful proxy for tracking iodine nucleation in the field, because it may result from ionization of I2Oy and/or HOIO2 generated by I2Oy + H2O. Nevertheless, connecting the dots between these observations and those of precursors and smaller gas-phase species (I2, I, IO, HOI, OIO)5 is crucial to facilitating the development of a chemical mechanism that can be adapted for atmospheric modeling purposes. To our best knowledge, ours is the first complete iodine gas-to-particle conversion mechanism (Fig. 7) supported by direct experimental evidence. Future modeling work should adapt this scheme to carry out a global assessment of the contribution of iodine new particle formation to the atmospheric aerosol burden and its associated radiative forcing.
Pulsed laser and continuous broad band photolysis
A PLP system (Supplementary Fig. 1) was employed to generate iodine oxides from the 193-nm or 248-nm photolysis of I2/O3 mixtures in a 3.75-cm diameter tubular reaction cell. Alternatively, a Xenon lamp was used for continuous BBP of I2 in the presence of O3. A flow of 0.2–20 slm of N2 carrier gas (99.999%) was introduced in the reactor, depending on the target pressure. I2 molecules were entrained in the carrier flow by passing a smaller flow of carrier gas (10–500 sccm) through a heated, temperature-controlled flask containing I2 crystals. O3 was added by flowing O2 (10–200 sccm) through an electrical discharge. The excimer laser and the lamp beams were passed unfocussed through a quartz viewport along the tube main axis. An atmospheric pressure bubbler was employed to entrain water vapor into the carrier flow at approximately the equilibrium vapor pressure, resulting in a water mixing ratio of ~2% in the flow tube ([H2O] = 2.3 × 1017 molecule cm−3 at 350 torr and 295 K). The pressure in the reactor was set by a throttle valve placed between the reactor and an Edwards 80 roots blower—oil rotary pump combination. The flows were set using MKS calibrated mass flow controllers, and pressure was measured using a set of 10 Torr and 1000 Torr MKS Baratron pressure transducers. O3 and I2 concentrations were measured using a Herriott-type absorption cell situated upstream of the reactor42.
Photoionization time-of-flight mass spectrometry
PI-ToF-Ms systems at Leeds University have been employed extensively to study reaction kinetics relevant to combustion-related and tropospheric organic and halogen chemistry43,44,45, and upper atmospheric chemistry of meteoric metals46. The first direct observation of IxOy (x ≥ 2) gas-phase species was achieved using the older of these two systems27. The newer machine employed in this work has been described in detail in a previous publication46.
The gas in the reactor tube (Supplementary Fig. 1) is sampled on the axis via a skimmer cone with a 200-μm pinhole using a scroll pump-backed turbo-molecular pump. PI of molecules and clusters takes place in the ionization chamber (P = 10−4−10−5 Torr) before mass spectrometric detection. Alternatively, a differentially pumped roughing chamber can be inserted between the reactor and the PI chamber for experiments requiring high pressure (P > 20 Torr). In this configuration, the gas is sampled via a 500-μm pinhole into the roughing chamber, forming a high-density jet that is directed toward the 200-μm pinhole skimmer cone. The PI chamber is fitted with viewports, allowing a pulsed laser beam to be directed through the high-density region of the sampled gas jet. VUV ionization is achieved by tightly focusing in a rare-gas cell (Xe) the third harmonic of a Nd:YAG laser (Continuum Surelite 10-II), which produces VUV radiation by frequency tripling (118.2 nm, or equivalently 10.5 eV)47,48. The 118.2-nm radiation is delivered at the PI chamber by a waveguide, which is a ¼” glass tube with either constant inner diameter or tapered for enhanced PI efficiency. This technique shows an excellent detection limit for organic molecules such as acetone43 (1011 molecule cm−3 in a single accumulation in analog mode), which is used as a standard for optimizing the performance of the instrument. The conversion efficiency of frequency tripling in a rare gas is low (~10−5), and therefore VUV PI is a viable method for molecules with substantial PI cross-sections (>10−18 cm2 molecule−1). Possible interference from the 355-nm fundamental, if not separated from the VUV third harmonic, needs to be considered. This is important for molecules with UV–vis absorption bands, low ionization energy and high two-photon PI cross-sections. For example, water is detected at m/z = 18 (Fig. 1) using the 118.2-nm (10.5 eV) PI beam, even though its ionization potential is 12.621 eV. This most likely results from REMPI, where the intermediate state at 118.2 nm is the C electronic state or a Rydberg state of water49, and a 355-nm photon is enough for reaching the ground state of the ion. Although the PI beam is diverging in the ionization volume, this appears to be compensated by the high water concentrations employed. A 106.7 nm (11.6 eV) PI beam can also be generated by frequency tripling the second harmonic of a 532-nm pumped dye laser running on DCM dye. The power of this beam is approximately an order of magnitude lower than that of the 10.5 eV beam.
The positive ions resulting from PI of molecules in the sampled gas jet are accelerated toward the ToF-MS (Kore Technology) by a set of ion optics. This machine has been described in detail elsewhere46. A pre-amplifier coupled to the positive ion detector provides simultaneous analog and digital outputs. The analog output, which can be modulated linearly by varying the detector gain, is intended for registering large signals from species with high PI efficiency and/or high concentration. This output is recorded by using a digital oscilloscope (Picoscope 6000). The mass peaks appear in the time axis of the oscilloscope delayed with respect to the PI laser pulse by a characteristic time of flight. The peaks are then gate-integrated and passed on to a PC for further analysis. A limitation of this method is that strong signals cause detector overload after the corresponding peak during a significant lapse, which appears as a negative signal with respect to the spectrum baseline. Thus, peaks of other species arriving at the detector closely after the species causing a large peak are affected by this interference. Overloads can be eliminated by tuning down the detector gain, but this also reduces the sensitivity to small signals. To prevent detector overload by I+ and I2+, their mass peaks were gated out by pulsed biasing of the ion optics using a house-built dual-gating box.
The digital output is provided to a counting system (time-to-digital convertor, TDC) by means of a fast comparator. The Kore Technology TDC counts ions within a sequence of flight-time bins (0.5 ns) referred to the PI laser pulse. In this way, a histogram of counts versus time of flight, (i.e., a mass spectrum) is built. The counting method is suitable for capturing small signals (low concentration or low PI efficiency). The signal remains proportional to concentration for low counting rates. Although spectra measured with this technique are not affected by detector overload, for high counting rates, departure from linearity occurs and the peaks appear saturated.
Lasers and detectors are synchronized using a delay generator (Quantum Composers, 9518). In every measuring cycle, the delay generator triggers the Nd:YAG laser and after a few microseconds triggers the TDC or the scope to establish the time zero event of each measuring cycle. In addition, the delay generator triggers the excimer laser that initiates chemistry by photolyzing a radical precursor. The delay between the photolysis and the PI laser is scanned in order to sample reaction kinetics. In a typical digital experiment, 1000 digital spectra were accumulated for every reactant concentration and laser pulse delay, which at a 5-Hz laser-repetition rate takes 200 s. The built-in software of the MS-ToF does not handle synchronization of the delay generator and the TDC, and therefore the delays were set manually, at the cost of a poorer time resolution. Once the accumulation was complete, the delay between laser pulses and/or concentration of reagents was changed, and a new accumulation started. Kinetic experiments using the digital output are shown in Fig. 4 and Supplementary Fig. 3 (Exp. #1). Alternatively, the mass spectra in the analog mode were recorded by scanning automatically the delay between the lasers using a LabView program, which was coded to operate synchronously the delay generators and the digital oscilloscope. Typically, around 30 delay scans were average in analog mode. Kinetic experiments using the analog output are illustrated in Supplementary Fig. 3 (Exps. #2 and #3).
Additional experiments to study the influence of water on the removal of atomic iodine were carried out with the Resonance and off-Resonance Fluorescence by Lamp Excitation (ROFLEX) machine35 in an atmospheric pressure BBP flow tube set up. A 3–15 slm flow of synthetic air carrying molecular iodine (~1010 molecule cm−3) and ozone (~1012 molecule cm−3) was passed to a 4-cm-diameter, 50-cm-long quartz tube where it was irradiated by a Xe arc lamp. The main flow and flow ratios were varied to keep the concentration of I2 and O3 constant while varying the residence time of the gas mixture on the tube. The gas mixture was sampled at the end of the flow tube by using a small aperture into the ROFLEX chamber at 40 Torr. Iodine atomic resonance fluorescence is excited by a temperature-stabilized iodine radiofrequency lamp, and collected perpendicularly by using a VUV-sensitive channel photomultiplier in counting mode. The data collected in these experiments is plotted in Supplementary Fig. 4. The analysis of this dataset using numerical kinetic modeling is explained below.
The processed PI-ToF-MS data consist of integrated peak signals (proportional to concentration) versus laser delay time in the case of PLP experiments, or a single mass spectrum in the case of BBP experiments, which correspond to a single time point, time being the residence time in the flow tube. The data obtained with the ROFLEX machine comprises the iodine atomic resonance fluorescence signal versus residence time in the flow tube.
Simple chemical systems can be described by sets of ordinary differential equations (ODEs) that are analytically solvable. In these cases, the observed data can be fitted to analytical expressions using a least-squares method, from which reaction rates can be extracted. This can be done for example in the case of the resonance fluorescence experiments if we assume that the only relevant reactions describing the behavior of atomic iodine are:
Because of the fast photolytic removal of I2, an effective iodine loss rate in the presence of water can be extracted by simply fitting exponential decays to the time traces and calculating the differences between the removal rates with and without water. This, however, would not allow the concentration of O3 to be estimated because IO reactions recycling atomic iodine are ignored:
Multiplexed detection systems like the PI-ToF-MS provide simultaneous data from many molecules. To explain their kinetic traces, complex mechanisms with many reactions need to be constructed (e.g., Supplementary Tables 1 and 2). For these, the corresponding ODEs are coupled and not amenable to analytical solution. By combining an ODE numerical integrator and a nonlinear least-squares algorithm to fit simulated curves to the observed ones, some of the unknown reaction rates of the system may be determined, provided that the problem has enough degrees of freedom and that the free parameters are uncorrelated. When the initial conditions are known (concentration of precursors and laser energies), it is possible to derive the scaling factors of the signals observed by setting them as floating parameters. We use a standard integrator for stiff ODE problems (i.e., containing reaction rates spanning orders of magnitude) and a constrained nonlinear multivariable least-squares method from the Mathematics Matlab toolboxes50.
The left panel of Supplementary Fig. 4 shows the results obtained for the ROFLEX flow tube data with the numerical integration–nonlinear fitting analysis considering IO reactions. The right panel compares the effective removal rate constants obtained by analytical fitting and numerical integration–nonlinear fitting.
Iodine oxide particle pyrolysis
The set up was modified to conduct a set of BBP-pyrolysis experiments by placing near the sampling point an iron wire shaped into a 10-mm diameter coil connected to a power supply by electrical feedthrough (Supplementary Fig. 2). The IOPs grew to a few nanometers26 in the flow tube at room temperature over ~3 s residence time. The carrier gas and particles passed through the first wire loop and were then sampled from the center of the coil in order to detect potential evaporation products. The color of the glowing filament suggested a temperature range of 1500–2500 K, although the gas temperature was presumably much lower. The gas spent a few tens of milliseconds in the hot region before sampling. Before adding water to the main flow, the current through the wire was changed until all IxOy signals were removed by thermal dissociation, in order to minimize potential contributions of gas-phase reactions generating HOIO2 at high temperature.
Electronic structure and master equation calculations
All gas-phase quantum-mechanical calculations reported in this work were performed using the Gaussian0951 software, and thermodynamic quantities are reported for the conditions of standard temperature (298.15 K) and pressure (1 atm).
The I2O2 + H2O ↔ HOIO + HOI and I2O3 + H2O ↔ HOIO2 + HOI reactions in the gas-phase (Supplementary Figs. 5 and 6, respectively) were explored using a high-level method employed in previous work for the I2O4 + H2O ↔ HOIO2 + HOIO (Supplementary Fig. 7) and I2O5 + H2O ↔ 2HOIO2 reactions30. The geometries of the stationary points on the PES of both reactions were first optimized at the M06-2X52 level of theory, using the aug-cc-pVDZ53 basis set for H and O, and the effective core potential LANL2DZ basis set for Iodine atoms (M06-2X/aug-cc-pVDZ+LANL2DZ). Normal-mode vibrational frequency analyses were carried out to ensure that the stable minima had all positive vibrational frequencies. Energies were refined at the CCSD(T)54 level of theory with the aug-cc-pVTZ+LANL2DZ basis set. For all reactions, unscaled vibrational frequencies calculated with the M06-2X/aug-cc-pVDZ+LANL2DZ method were used to estimate the zero-point energy (ZPE) corrections.
A detailed description of the methods employed in our Born–Oppenheimer Molecular Dynamics (BOMD) simulations can be found in a previous publication30. The droplet system contained 191 water molecules and one I2Oy (y = 2, 3, 4) molecule. The simulations were carried out in the constant volume and temperature (300 K) ensemble. The integration step was set as 1 femtosecond, which has been proven to achieve sufficient energy conservation in water systems55,56,57,58. The I2O2, I2O3, and I2O4 systems were simulated for 50, 80, and 33 picoseconds, respectively (Supplementary Videos 2, 3, and 4, respectively).
Estimates of vertical ionization and fragmentation energies of iodine oxides and oxyacids (Supplementary Table 2) as well as reaction enthalpies of relevant reactions (Table 1 and Supplementary Table 3) that are not available in the literature were obtained by using the B3LYP functional combined with the standard 6-311 + G(2d,p) triple-ζ basis set for O and H and an all-electron (AE) basis set for I59. This may be described as a supplemented (15s12p6d)/[10s9p4d] 6-311G basis, the [5211111111, 411111111, 3111] contraction scheme being supplemented by diffuse s and p functions, together with d and f polarization functions. The full basis set is given in Table XIII of Glukhovtsev et al.59 Following geometry optimizations of the reactant and product molecules and ions and the determination of their corresponding vibrational frequencies and (harmonic) ZPE, energies relative to the reactants were obtained. Geometry optimizations and energy calculations for most of the molecules listed in Table 1 are already available from our previous work32,60. The additional calculations in this work have been carried out for IxOy with y = 3, 4 and HIOz with z = 2, 3. Ionization energies and reaction enthalpies obtained at B3LYP/6-311 + G(2d, p) (+AE) level of theory compare reasonably well with experimental values and calculations at the higher level reported in the literature (see Table 1 and Supplementary Tables 2 and 3). This method has also been used to calculate the enthalpies of chemical ionization reactions of iodine oxides and oxyacids with nitrate, bromide and acetate ions generating IO−, IO2−, and IO3− (Supplementary Table 3).
To determine rate constants from ab initio data, we have used the Master Equation Solver for Multi-Energy well Reactions (MESMER)39,61. The set of ro-vibrational energy levels in the ab initio PES are grouped into energy grains, whose populations are described by a system of coupled differential equations that account for collisional energy transfer and dissociation. The microcanonical rate coefficients of the unimolecular reactions that occur in each grain are calculated from the ab initio PES. For barrierless association reactions, the inverse Laplace transform method (ILT)62,63 is used to calculate the microcanonical association rates from an estimate of the high-pressure limiting-rate coefficient for the molecular association. The microcanonical dissociation rate coefficients are then determined by detailed balance. Collisional energy transfer probabilities are described by using the exponential down model. For further details, see Galvez et al.32 and references therein.
The data that support the findings of this study are available from the corresponding authors on reasonable request.
The LabView and Matlab software tools written to respectively synchronize the experiments and analyze the kinetic data are available from the corresponding authors on reasonable request.
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This study has received funding from the European Research Council Executive Agency under the European Union’s Horizon 2020 Research and Innovation programme (Project “ERC-2016-COG 726349 CLIMAHAL”). J.C.G.M. acknowledges financial support from the State Agency for Research of the Spanish MCIU through the “Center of Excellence Severo Ochoa” award to the Instituto de Astrofísica de Andalucía (SEV-2017-0709), the Ramon y Cajal Program (RYC-2016-19570) and the National I + D + i Program (RTI2018-095330-B-100). We thank the Holland Computing Center of the University of Nebraska—Lincoln for providing computing resources.
The authors declare no competing interests.
Peer review information Nature Communications thanks Thorsten Hoffmann, Gordon McFiggans, and the other, anonymous, reviewer(s) for their contribution to the peer review of this work. Peer reviewer reports are available.
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Gómez Martín, J.C., Lewis, T.R., Blitz, M.A. et al. A gas-to-particle conversion mechanism helps to explain atmospheric particle formation through clustering of iodine oxides. Nat Commun 11, 4521 (2020). https://doi.org/10.1038/s41467-020-18252-8
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