Over the last few years, the implementation of whole exome sequencing (WES) technologies has nominated several pathogenic mutations for familial forms of multiple sclerosis (MS) [1,2,3]. Recently, Garcia-Rosa et al. described a homozygous loss-of-function mutation in galanin receptor 2 (GALR2 p.Trp249Leu, rs61745847) in a female patient who developed MS at 22 years of age [4]. The validity of WES studies, and the existence of pathogenic mutations for Mendelian forms of MS, has proven a controversial topic [5, 6]. Therefore, it is important to assess newly identified mutations in additional populations of MS patients and healthy controls, to confirm their role in the pathophysiology of disease.
To further define the contribution of GALR2 p.Trp249Leu in the onset of MS, we genotyped rs61745847 in 2433 patients diagnosed with MS and 1066 healthy controls. All participants reported European ancestry, and were collected through the longitudinal Canadian Collaborative Project on Genetic Susceptibility to Multiple Sclerosis. Basic demographics for this population have been provided elsewhere [7, 8]. The ethical review board at the University of British Columbia approved the study, and all participants provided informed consent. Genotyping rs61745847 in these MS patients and controls using a Taqman probe, did not identify any GALR2 p.Trp249Leu homozygote carriers. However, 46 MS patients and 21 healthy controls were found to carry one copy of the mutation, resulting in a minor allele frequency of 0.94 and 0.98%, respectively (Table 1), suggesting that heterozygote mutation carriers are not at an increased risk of developing MS (Fisher’s p = 0.89).
To investigate whether other potentially pathogenic GALR2 mutations are present in the Canadian MS cohort, we mined WES data from 483 MS patients for homozygote or compound heterozygote mutations, resulting in missense or nonsense GALR2 substitutions. This genetic resource was generated using an Ion Ampliseq exome kit and an Ion Torrent Proton sequencer with 100× minimum average sequencing depth, as previously described [7]. Mining WES data from MS patients did not identify potentially pathogenic mutations in GALR2. One patient carrying a heterozygous p.Pro130Ala (rs761610755) variant, and five p.Ser346Arg (rs8192514) heterozygote carriers were identified. The prevalence of these mutations in our cohort is consistent with the allelic frequencies reported in The Genome Aggregation Database for samples of European ancestry (0.003 and 0.58%) [9], indicating that they are unlikely to play a role in the onset of MS.
In summary, the genetic characterization of GALR2 in MS patients and controls of European ancestry from Canada did not provide additional support for this galanin receptor subtype having a role in the biological processes leading to the development of disease. Given the rs61745847 minor allele frequency observed in our study, we can extrapolate that ~3300 Canadians are homozygote for GALR2 p.Trp249Leu, assuming a Canadian population of 36 million and a homozygote frequency of 0.00962. If this mutation was sufficient for the development of clinical MS symptoms, GALR2 would account for ~3.3% of the ~100,000 Canadians diagnosed with MS [10], thus resulting in numerous homozygote carriers in our cohort. The lack of such homozygote patients suggests that GALR2 p.Trp249Leu may only have a role in the pathophysiology of MS, if additional yet to be determined genetic and/or environmental factors are also present. Alternatively, despite the known GALR2 role in neurogenesis and neuronal healthy, and the observed cellular miss localization of GALR2 p.Trp249Leu [4]; it is possible that one of the other four rare homozygote and predicted deleterious mutations identified by Garcia-Rosa et al., or a mutation overlooked in their analysis, is responsible for the onset of MS in their patient. Thus, further genetic analysis characterizing GALR2 in MS patients, and in particular the p.Trp249Leu (rs61745847) mutation, are warranted to confirm a role for galanin receptors in the pathological mechanisms leading to the onset of MS.
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Acknowledgements
This research was funded by the Michael Smith Foundation for Health Research (16827), Canadian Institutes of Health Research (MOP-137051), and the Vancouver Foundation (ADV14–1597).
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Encarnacion, M., Bernales, C.Q., Traboulsee, A.L. et al. Analysis of galanin receptor GALR2 in multiple sclerosis. Pharmacogenomics J 19, 499–500 (2019). https://doi.org/10.1038/s41397-019-0100-6
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DOI: https://doi.org/10.1038/s41397-019-0100-6