Pelak et al. used genome-wide SNP arrays on >2,000 HIV-1-infected patients to identify copy number variants (CNVs) associated with HIV infection control. Increased copy number of genes encoding two immunoglobulin-like receptors, KIR3DL1 and KIR3DS1, correlated with a lower viral load, although this effect was dependent on epistatic interactions between these receptor genes and those of their HLA ligands. This reinforces a model — for which the authors obtained functional evidence — whereby these receptors, which are present on natural killer cells, influence the immune response to HIV-1-infected cells.