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The PSI-MOD community standard for representation of protein modification data

Nature Biotechnology volume 26, pages 864866 (2008) | Download Citation

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Acknowledgements

We gratefully acknowledge the work of David Horn of Agilent Technologies, Santa Clara, California, USA, and Detlev Suckau of Bruker Daltonik GmbH, Bremen, Germany, while working on development of the PSI-MS list of descriptive labels. We also acknowledge the contribution made by Ken Mitchelhill in preparing the DeltaMass list and by Len Packman in maintaining it for the Association of Biomolecular Resource Facilities. We thank Richard Cote of the European Bioinformatics Institute Proteomics Services Team for his work in developing the Ontology Lookup Service and the Ontology Browser for the PRIDE Project, and especially for developing the PSI-MOD mass search server. We thank Henning Hermjakob of the European Bioinformatics Institute for his leadership of the Proteomics Services Team and his contributions to the Proteomics Standards Initiative. The PSI meetings were supported by the Human Proteome Organization and by generous sponsorship from academic and commercial organizations. The collaborative development process has been facilitated by the infrastructure provided by Source Forge.

Author information

Affiliations

  1. European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK.

    • Luisa Montecchi-Palazzi
    •  & John S Garavelli
  2. Beavis Informatics, Suite 706, 70 Arthur Street, Winnipeg, MB, R3B 1G7 Canada.

    • Ron Beavis
  3. Swiss Institute of Bioinformatics, 1 Rue Michel-Servet, CH-1211 Geneva, Switzerland.

    • Pierre-Alain Binz
  4. Geneva Bioinformatics (GeneBio) S.A., 25 Avenue de Champel, CH-1206 Geneva, Switzerland.

    • Pierre-Alain Binz
  5. Mass Spectrometry Facility, University of California, 600 16th Street, MC 2240, Genentech Hall, Suite N472A, San Francisco, California 94143-0446, USA.

    • Robert J Chalkley
  6. Matrix Science, 8 Wyndham Place, London W1H 1PP, UK.

    • John Cottrell
    •  & David Creasy
  7. Thermo Fisher Scientific 355 River Oaks Parkway San Jose, California 95134, USA.

    • Jim Shofstahl
  8. Applied Biosystems|MDS Analytical Technology, 850 Lincoln Centre Dr., Foster City, California 94404, USA.

    • Sean L Seymour

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Correspondence to John S Garavelli.

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https://doi.org/10.1038/nbt0808-864

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