Abstract
Clear G-bands were revealed by applying the TUG method on chromosomes of 5 species of higher plants (Lilium davidii, Viciafaba, Hordeum vulgare, Ginkgo biloba and Triticum monococcum). Some details of the TUG method which consisted of treating chromosomes with both trypsin and urea were also studied. The mechanisms that might account for the presence of G-bands in plants were discussed.
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Introduction
Since the beginning of 1970s, the G-banding technique for studying human and other animal chromosome has been well established. But despite much effort in many laboratories, attempts to reveal G-bands in plants had not been successful for a long time. More than a decade ago, we used, in preparing plant chromosomes, a method similar to that for preparing animal chromosome1. Only in recent years, some achivements in G-banding were reported in several species of plants3, 4, 7, 8, 13, 14, 15. However, only a few of these reports showed bands that appeared to be comparable in quality to those of animals; many of them could only be regarded as G-band equivalents instead of real ones. As a result some questions arised: Does the G-banding cast a general significance that applies to plants as well as to animals? And if so, how can we manage to reveal G-bands in highly condensed plant chromosomes? Thus, a new method of general applicability, was developed, later called TUG method. This procedure used a double treatment with trypsin and urea5. Following this method, G-bands have been clearly revealed in 16 species of plants. The G-bands of some plants with large chromosomes, for example, Lilium davidii, are even clearer than those of some animals reported lately. In the present paper, details of the TUG method and its application to karyotype analysis of Lilium davidii, Vicia faba, Hordeum vulgate, Ginkgo biloba, and Triticum monococcum are reported, and the mechanism of G-banding and some factors involved in G-banding treatment are discussed.
Materials and Methods
Meterials
Five species of plants(cf Tab 1)
Method
Chromosomes were prepared with the methods of wall-degradation, hypotonic treatment and steam-drying1, 2, 3.
Chromosome preparation
1) Roots from germinating seeds growing at 25°C, bulbs were cultured in moist wood scraps till roots were 1-3 cm long. 2) Roots tips were excised and treated with 0.02% colchicine solution for 1-2 h. 3) Excising the good root tips and immersing them in 0.075 M KCl solution for 30 min at 20-25°C for pre-hypotonic treatment. 4) They were fixed in methanol: glacial acetic acid 3:1 fixation solution for 30 min and then washed with distilled water. 5) Treated with 2.5% enzyme mixture [2.5 g cellulase (“ONOZUKA” R-10) and 2.5 g pectinase (form Aspergilus niger, from Serva, NY) in 100 ml distilled water] at 25°C for about 40-60 min. Washed with distilled water or 0.075 M KCl twice and incubated at 25°C for 15 min. 6) Freshly prepared methanol: acetic acid (3:1) was added to the material. 7) Put 1-2 root tips on the slide which was kept in frozen distilled water. Added a (few) drop(s) of fixation solution to them.Tore the material with a pair of forceps and removed the supernatant. 8) Two drops of fixation solution were added onto the slide, which were dried with steam from the undersurface of the slide and then placed in a 60–80°C oven for 2 h. The slide was stored at room temperature till use for banding 1-2 d later.
G-banding procedures
1. TUG method
Treated the chromosome samples with 0.01% trypsin (Difco) in 0.02% EDTA-CMF solution at 4-10 °C for a few sec. Washed with 0.85% NaCl. Then treated with 5.3 M urea (1 part of 8 M urea mixed with 2 parts of phosphate buffer, pH 7.4) at 4-10 °C for a few sec. Washed with 0.85% NaCl and then stained with Giemsa solution (Giemsa: phosphate buffer=1:30, pH 7.4) for 5 min.
2. Trypsin method
Treated the chromosome samples with 0.01% trypsin as mentioned above for a few seconds. Washed with 0.85% NaCl. Then stained with Giemsa solution.
3. Urea method
Treated the chromosome samples with 5.3 M urea (1 part of 8 M urea mixed with 2 parts of phosphate buffer, pH 7.4) at 20-25 °C for a few seconds. Washed with 0.85% NaCl. Then stained with Giemsa solution mentioned above.
Results
G-bands observation on chromosomes of several plant species
By using the TG, UG and TUG methods mentiond above, we revealed G-bands on chromosomes of the following species: Hordeum vulgare, Vicia faba, Ginkgo biloba, Triticam monococcum and Lilium davidii. Among the 3 methods, TUG method, i.e. treating chromosomes successively with both trypsin and urea, produced the clearest bands and results were regularly reproducible. In Hordeum vulgare, G-bands were distributed along the whole length of its chromosomes(cf Fig 1). In contrast, the C-band appeared only nearer the centromere. Fig 2 showed the G-band Vicia faba. There were (more than) 20 odd bands on its M chromosome. In Triticium monococcum and Ginkgo biloba, each chromosome also showed clear G-bands(cf Fig 3 and 4).
Comparison of G-bands on homologous chromosome
To determine the correspondence between G-bands of homologous chromosomes, cells at 3 stages of metaphase (pro-metaphase, early-metaphase and mid-metaphase) from Lilium davidii were adopted for examination. Fig 5A, 5B and 5C demonstrated that all 3 substages revealed clear G-bands. These were the clearest G-bands so far obtained in plants, and were very similar to those of animal chromosomes. Bands of pro-metaphase chromosomes are easily distinguishable. Furthermore, in each cell, bands of the 2 homologous chromosomes were identical in number, relative width and location which will be very useful in pairing homologous chromosomes.
Correlation between band number and cell division stages
It was found that the number of G-bands was closely related to the division stages in plant chromosomes. Fig 6 showed the chromosome III of Lilium davidii. There were 32 bands at late prophase, 21 at pro-metaphase, 17 at early metaphase and 12 at mid-metaphase. These results were very similar to those found in the high resolution G-banding study of Muntiak muntiak11 and humans12. Thus it can be said that there were many similarities between G-bands of plant chromosomes and those of animal chromosomes. They both exhibited dark and light bands and their number varied with the cell division stages. From prophase to metaphase, bands darkened and their number decreased as a result of because of the union of sub-bands, indicating that a band in metaphase may include several sub-bands in prophase. Hence the most favorable stage for G-banding lies somewhere between prophase and early metaphase, when the chromosome structure is most relaxed, rather than in mid metaphase.
Discussion
Relationship between G-banding and the method used in preparing plant chromosome samples
Recently, some assumptions have been proposed to explain why plant chromosomes do not show G-bands. Greilhuber(1977) pointed out that if the crux of the problem does not lie in the method of preparing the plant chromosome samples, then it is plausible to assume that G-bands do not exist at all. From our work, it becomes evident that the main trouble is that suitable means for preparing the chromosome samples to reveal the G-bands had not yet been devised. It has been proposed that the procedures in preparing chromosome samples for C-banding should not be copied for G-banding procedures3, because degradation with HCl is unfavorable to the induction of G-band6 and the flame-drying makes chromosomes insensitive to the band-revealing treaments. So the traditional HCl hydrolyzing squashing method was abandoned and cell wall-degradation hypotonic treatment method was adopted instead1. A mixture of cellulase and pectinase was used to degradate the cell wall. Then chromosome samples were made by means similar to that used in human samples. Slides were dried with steam(60–80°C), which can assure heating the slides evenly. The enzyme degradation and hypotonic treatment are the crucial steps in the procedures. The concentration of enzyme mixture higher than 5%, especially a high concentration of cellulase, will interfere with the revealing of G-bands. On the other hand, hypotonic treatment with KCl is absolutely necessary as using pure water would being about untoward influences.
Peculiarities of plant chromosome and the G-banding methods
Drewry7 first revealed G-bands and C-bands in Pinus resinosa using trypsin. Chen et al4 reported G-bands in several species of plants revealed by the same method. It has been proved that the trypsin method can widely be applied in animal and plant chromosome G-banding. However, we found that the time of trypsin digestion in plant and human chromosomes should be notably different, i. e. much shorter for palnts material. This illustrates that plant and human chromosomes are distinct in structure, and this distinction probably involves not only DNA, but also the type and content of chromosomal protein. In generall, DNA of plant chromosome are tightly coiled and highly condensed, so the proteins covering chromosome may be less than that of animal chromosomes, requiring a much shorter digestion time. In contrast, the degree of DNA condensation of human chromosomes is relatively low, and there may be more associated proteins on their surface; hence a longer digestion time is needed. According to Mckay10, the bands were resulted from differences in condensation of the chromatin and were intrinsic properties that could be revealed by banding treatments, rather than artifacts produced during the course of manipulation. As a result, we believed that there is a close relationship between the proteins covering the surface of chromosomes and G-band revealing. The TUG methods recommended eliminate proteins mildly so that much clearer G-bands may therely be obtained. It is accepted that more in depth study should be programmed to further improve this method.
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*The project was supported by the National Natural Sciences Foundation of China.
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Chen, R., Song, W., Li, X. et al. Chromosome G-banding in plants by inducing with trypsin and urea. Cell Res 4, 79–87 (1994). https://doi.org/10.1038/cr.1994.8
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DOI: https://doi.org/10.1038/cr.1994.8
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