Perspective
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Open Access
Featured
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Original Article
| Open AccessQuantifying separation and similarity in a Saccharomyces cerevisiae metapopulation
- Sarah Knight
- & Matthew R Goddard
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Original Article |
An in vitro culture model to study the dynamics of colonic microbiota in Syrian golden hamsters and their susceptibility to infection with Clostridium difficile
- Matthew Miezeiewski
- , Todd Schnaufer
- & Jon H Heinrichs
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Original Article |
Life on the edge: functional genomic response of Ignicoccus hospitalis to the presence of Nanoarchaeum equitans
- Richard J Giannone
- , Louie L Wurch
- & Mircea Podar
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Original Article |
Deterministic processes guide long-term synchronised population dynamics in replicate anaerobic digesters
- Inka Vanwonterghem
- , Paul D Jensen
- & Gene W Tyson
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Original Article |
Fine-scale spatial patterns in bacterial community composition and function within freshwater ponds
- Gavin Lear
- , Julia Bellamy
- & Hannah L Buckley
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Original Article |
Direct exchange of vitamin B12 is demonstrated by modelling the growth dynamics of algal–bacterial cocultures
- Matthew AA Grant
- , Elena Kazamia
- & Alison G Smith
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Original Article |
A new biofilm-associated colicin with increased efficiency against biofilm bacteria
- Olaya Rendueles
- , Christophe Beloin
- & Jean-Marc Ghigo
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Original Article |
Community shifts of actively growing lake bacteria after N-acetyl-glucosamine addition: improving the BrdU-FACS method
- Yuya Tada
- & Hans-Peter Grossart
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Original Article |
Microbial and viral metagenomes of a subtropical freshwater reservoir subject to climatic disturbances
- Ching-Hung Tseng
- , Pei-Wen Chiang
- & Sen-Lin Tang
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Original Article |
Combining high-throughput sequencing with fruit body surveys reveals contrasting life-history strategies in fungi
- Otso Ovaskainen
- , Dmitry Schigel
- & Jenni Nordén
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Original Article |
A global perspective on marine photosynthetic picoeukaryote community structure
- Amy R Kirkham
- , Cécile Lepère
- & David J Scanlan
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Original Article |
Speedy speciation in a bacterial microcosm: new species can arise as frequently as adaptations within a species
- Alexander F Koeppel
- , Joel O Wertheim
- & Frederick M Cohan
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Original Article |
Bacterial colonization of Hydra hatchlings follows a robust temporal pattern
- Sören Franzenburg
- , Sebastian Fraune
- & Thomas CG Bosch
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Original Article |
In situ substrate preferences of abundant bacterioplankton populations in a prealpine freshwater lake
- Michaela M Salcher
- , Thomas Posch
- & Jakob Pernthaler
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Original Article |
Reproducibility of Vibrionaceae population structure in coastal bacterioplankton
- Gitta Szabo
- , Sarah P Preheim
- & Martin F Polz
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Original Article |
Strain-specific functional and numerical responses are required to evaluate impacts on predator–prey dynamics
- Zhou Yang
- , Chris D Lowe
- & David J S Montagnes
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Original Article
| Open AccessDiversity and population structure of Marine Group A bacteria in the Northeast subarctic Pacific Ocean
- Elke Allers
- , Jody J Wright
- & Matthew B Sullivan
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Short Communication |
A decade of seasonal dynamics and co-occurrences within freshwater bacterioplankton communities from eutrophic Lake Mendota, WI, USA
- Emily L Kara
- , Paul C Hanson
- & Katherine D McMahon
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Original Article |
Hydration dynamics promote bacterial coexistence on rough surfaces
- Gang Wang
- & Dani Or
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Original Article |
Significant and persistent impact of timber harvesting on soil microbial communities in Northern coniferous forests
- Martin Hartmann
- , Charles G Howes
- & William W Mohn
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Original Article |
Shape and evolution of the fundamental niche in marine Vibrio
- Arne C Materna
- , Jonathan Friedman
- & Eric J Alm
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Original Article
| Open AccessAchieving temperature-size changes in a unicellular organism
- Jack Forster
- , Andrew G Hirst
- & Genoveva F Esteban
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Original Article |
Link between microbial composition and carbon substrate-uptake preferences in a PHA-storing community
- Maria G E Albuquerque
- , Gilda Carvalho
- & Per H Nielsen
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Original Article |
Importance of rare taxa for bacterial diversity in the rhizosphere of Bt- and conventional maize varieties
- Anja B Dohrmann
- , Meike Küting
- & Christoph C Tebbe
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Original Article
| Open AccessLake microbial communities are resilient after a whole-ecosystem disturbance
- Ashley Shade
- , Jordan S Read
- & Katherine D McMahon
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Original Article |
Dynamics of ammonia-oxidizing archaea and bacteria populations and contributions to soil nitrification potentials
- Anne E Taylor
- , Lydia H Zeglin
- & Peter J Bottomley
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Scientific Correspondence |
Monitoring of Vibrio harveyi quorum sensing activity in real time during infection of brine shrimp larvae
- Tom Defoirdt
- & Patrick Sorgeloos
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Original Article |
Vertical segregation and phylogenetic characterization of ammonia-oxidizing Archaea in a deep oligotrophic lake
- Jean-Christophe Auguet
- , Xavier Triadó-Margarit
- & Emilio O Casamayor
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Original Article |
Spatial and temporal dynamics of the microbial community in the Hanford unconfined aquifer
- Xueju Lin
- , James McKinley
- & Allan Konopka
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Original Article |
Stochastic and deterministic assembly processes in subsurface microbial communities
- James C Stegen
- , Xueju Lin
- & James K Fredrickson
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Short Communication |
Genomic evidence of rapid, global-scale gene flow in a Sulfolobus species
- Dominic Mao
- & Dennis Grogan
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Original Article |
Ecological niche models reveal the importance of climate variability for the biogeography of protosteloid amoebae
- María Aguilar
- & Carlos Lado
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Original Article |
Effect of oxygen minimum zone formation on communities of marine protists
- William Orsi
- , Young C Song
- & Virginia Edgcomb
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Original Article |
Microbial diversity in arctic freshwaters is structured by inoculation of microbes from soils
- Byron C Crump
- , Linda A Amaral-Zettler
- & George W Kling
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Original Article |
Composition of the summer photosynthetic pico and nanoplankton communities in the Beaufort Sea assessed by T-RFLP and sequences of the 18S rRNA gene from flow cytometry sorted samples
- Sergio Balzano
- , Dominique Marie
- & Daniel Vaulot
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Original Article
| Open AccessInfluence of nutrients and currents on the genomic composition of microbes across an upwelling mosaic
- Lisa Zeigler Allen
- , Eric E Allen
- & Andrew E Allen
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Original Article
| Open AccessVariation in local carrying capacity and the individual fate of bacterial colonizers in the phyllosphere
- Mitja N P Remus-Emsermann
- , Robin Tecon
- & Johan H J Leveau
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Short Communication
| Open AccessSelection of primers for optimal taxonomic classification of environmental 16S rRNA gene sequences
- David A W Soergel
- , Neelendu Dey
- & Steven E Brenner
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Original Article |
Proteus mirabilis interkingdom swarming signals attract blow flies
- Qun Ma
- , Alicia Fonseca
- & Thomas K Wood
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Original Article |
Acyl homoserine lactone-based quorum sensing in a methanogenic archaeon
- Guishan Zhang
- , Fan Zhang
- & Xiuzhu Dong
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Short Communication
| Open AccessHigh local substrate availability stabilizes a cooperative trait
- Herwig Bachmann
- , Douwe Molenaar
- & Johan ET van Hylckama Vlieg
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Original Article |
An integrative study of a meromictic lake ecosystem in Antarctica
- Federico M Lauro
- , Matthew Z DeMaere
- & Ricardo Cavicchioli
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Original Article |
Effect of temperature and cycle length on microbial competition in PHB-producing sequencing batch reactor
- Yang Jiang
- , Leonie Marang
- & Mark C M van Loosdrecht
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Original Article |
Novel Clostridium populations involved in the anaerobic degradation of Microcystis blooms
- Peng Xing
- , Liang Guo
- & Qinglong L Wu
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Original Article |
Examining the global distribution of dominant archaeal populations in soil
- Scott T Bates
- , Donna Berg-Lyons
- & Noah Fierer
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Original Article |
Metatranscriptomic analysis of ammonia-oxidizing organisms in an estuarine bacterioplankton assemblage
- James T Hollibaugh
- , Scott Gifford
- & Mary Ann Moran
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Original Article |
Recovery of methanotrophs from disturbance: population dynamics, evenness and functioning
- Adrian Ho
- , Claudia Lüke
- & Peter Frenzel
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Original Article |
Multiple syntrophic interactions in a terephthalate-degrading methanogenic consortium
- Athanasios Lykidis
- , Chia-Lung Chen
- & Wen-Tso Liu
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Original Article |
The impact of reduced pH on the microbial community of the coral Acropora eurystoma
- Dalit Meron
- , Elinor Atias
- & Ehud Banin