Table of contents


cover image
Top

Editorial

Life, but not as we know it p297

doi:10.1038/nchem.2763

There are many unanswered questions regarding how the biomolecules and biomechanical processes that define life came to be. A collection of Articles in this issue show how intermediates in RNA synthesis might have formed and how the initiation and evolution of RNA replication might have occurred.


Top

News and Views

Organometallic chemistry: A shortcut to molecular complexity pp298 - 299

Masahiro Murakami & Naoki Ishida

doi:10.1038/nchem.2750

A unique transformation for the site-selective cleavage of one C–C single bond and two C–H bonds in sequence has now been developed. This enables a simple carbon skeleton to be reorganized into a significantly more complex form with remarkable efficiency.

See also: Article by Ye et al.


Organomimetic clusters: Precision in 3D pp299 - 301

Marek B. Majewski, Ashlee J. Howarth & Omar K. Farha

doi:10.1038/nchem.2756

Biomimetic molecules that can be easily tailored offer numerous opportunities. Now, boron-based clusters have been shown to be excellent biomimetics. The ease with which the cluster surfaces can be modified stands to change how chemists might go about preparing materials for imaging, drug delivery and other applications.

See also: Article by Qian et al.


Top

Articles

A prebiotically plausible synthesis of pyrimidine β-ribonucleosides and their phosphate derivatives involving photoanomerization pp303 - 309

Jianfeng Xu, Maria Tsanakopoulou, Christopher J. Magnani, Rafał Szabla, Judit E. Šponer, Jiří Šponer, Robert W. Góra & John D. Sutherland

doi:10.1038/nchem.2664

no alt info

Although ribose aminooxazoline has been shown to be a potential intermediate in prebiotic pyrimidine ribonucleotide synthesis, a route by which this could occur has remained elusive. Now, a remarkably efficient photoanomerization reaction has been investigated by theory and experiment. The new route affords enantiomerically pure ribonucleotides when the starting material is enantioenriched.


Prebiotic synthesis of phosphoenol pyruvate by α-phosphorylation-controlled triose glycolysis pp310 - 317

Adam J. Coggins & Matthew W. Powner

doi:10.1038/nchem.2624

no alt info

Chemical reconstitution of the triose glycolysis pathway is controlled by α-phosphorylation and provides a generational link between prebiotic ribonucleotide synthesis, triose glycolysis and serine metabolism. Now, research suggests that unification of nucleotide synthesis and triose metabolism may have been a fundamentally important step towards the origins of life.


A viscous solvent enables information transfer from gene-length nucleic acids in a model prebiotic replication cycle pp318 - 324

Christine He, Isaac Gállego, Brandon Laughlin, Martha A. Grover & Nicholas V. Hud

doi:10.1038/nchem.2628

no alt info

An unanswered question in the RNA world scenario is how sequence information could be transferred during replication of duplex RNA. Without the aid of sophisticated enzymes, strand reannealing occurs more quickly than template-directed synthesis. Now, a plausible prebiotic solution to this problem is presented, in which a viscous solvent enables information transfer from a gene-length double-stranded template.


Simple peptides derived from the ribosomal core potentiate RNA polymerase ribozyme function pp325 - 332

Shunsuke Tagami, James Attwater & Philipp Holliger

doi:10.1038/nchem.2739

no alt info

Lysine-rich peptides from the ribosomal core and derived homolysine decapeptides of either L-, D- or mixed chirality have now been shown to enhance RNA polymerase ribozyme activity at low magnesium concentrations, accelerate ribozyme evolution and enable templated RNA synthesis within membranous protocells.


Atomically precise organomimetic cluster nanomolecules assembled via perfluoroaryl-thiol SNAr chemistry pp333 - 340

Elaine A. Qian, Alex I. Wixtrom, Jonathan C. Axtell, Azin Saebi, Dahee Jung, Pavel Rehak, Yanxiao Han, Elamar Hakim Moully, Daniel Mosallaei, Sylvia Chow, Marco S. Messina, Jing Yang Wang, A. Timothy Royappa, Arnold L. Rheingold, Heather D. Maynard, Petr Král & Alexander M. Spokoyny

doi:10.1038/nchem.2686

no alt info

The operational simplicity of modifying the surfaces of thiol-capped gold nanoparticles has been a hallmark of their success in materials chemistry, despite having limited control over the surface composition. Now, SNAr chemistry on activated perfluoroaromatics has been shown to mimic this simplicity and allow for the synthesis of atomically precise nanomolecules.

See also: News and Views by Majewski et al.


Dynamics of the triplet-pair state reveals the likely coexistence of coherent and incoherent singlet fission in crystalline hexacene pp341 - 346

Nicholas R. Monahan, Dezheng Sun, Hiroyuki Tamura, Kristopher W. Williams, Bolei Xu, Yu Zhong, Bharat Kumar, Colin Nuckolls, Avetik R. Harutyunyan, Gugang Chen, Hai-Lung Dai, David Beljonne, Yi Rao & X.-Y. Zhu

doi:10.1038/nchem.2665

no alt info

Singlet fission — the splitting of a singlet exciton into two triplets — is a process that could be exploited to improve the power conversion efficiency of solar cells. Spectroscopic data now suggest that coherent and incoherent mechanisms for singlet fission in crystalline hexacene coexist and occur on different timescales.


Surfactant-free single-layer graphene in water pp347 - 352

George Bepete, Eric Anglaret, Luca Ortolani, Vittorio Morandi, Kai Huang, Alain Pénicaud & Carlos Drummond

doi:10.1038/nchem.2669

no alt info

Aggregation usually prevents dissolution of graphene in water. Now, hydroxide ion adsorption has been shown to allow the stabilization of true single-layer graphene in water — with no surfactant required — so long as the liquid is degassed beforehand. The resulting aqueous dispersions can contain high concentrations of exfoliated graphene that are stable for several months.


Computational design of self-assembling cyclic protein homo-oligomers pp353 - 360

Jorge A. Fallas, George Ueda, William Sheffler, Vanessa Nguyen, Dan E. McNamara, Banumathi Sankaran, Jose Henrique Pereira, Fabio Parmeggiani, T. J. Brunette, Duilio Cascio, Todd R. Yeates, Peter Zwart & David Baker

doi:10.1038/nchem.2673

no alt info

A computational method to design cyclic protein homo-oligomers has been developed. Using this approach, a series of idealized repeat proteins incorporating designed interfaces that direct their assembly into complexes possessing cyclic symmetry were fabricated. 15 out of 96 oligomers that were characterized experimentally were shown to be consistent with the computational model.


Remote C−H alkylation and C−C bond cleavage enabled by an in situ generated palladacycle pp361 - 368

Juntao Ye, Zhihao Shi, Theresa Sperger, Yoshifumi Yasukawa, Cian Kingston, Franziska Schoenebeck & Mark Lautens

doi:10.1038/nchem.2631

no alt info

Existing methods for C–H activation depend on pre-installed directing groups, the removal of which poses a practical limitation on the use of these reactions in synthesis. Now, a remote-selective C−H alkylation reaction of arenes using an in situ generated spiropalladacycle has been shown to furnish benzofurans and indoles without the need for a directing group.

See also: News and Views by Murakami & Ishida


Real-time molecular scale observation of crystal formation pp369 - 373

Roy E. Schreiber, Lothar Houben, Sharon G. Wolf, Gregory Leitus, Zhong-Ling Lang, Jorge J. Carbó, Josep M. Poblet & Ronny Neumann

doi:10.1038/nchem.2675

no alt info

Homogeneous crystal nucleation has now been observed by transmission electron microscopy in real time on a molecular scale. Countercation-dependent observations of polyoxometalate proto-crystal formation confirm existence of a higher energy classical molecular attachment mechanism, as well as a lower energy two-step mechanism via an intermediate dense phase.


Aldehydes as alkyl carbanion equivalents for additions to carbonyl compounds pp374 - 378

Haining Wang, Xi-Jie Dai & Chao-Jun Li

doi:10.1038/nchem.2677

no alt info

Methods utilizing renewable feedstocks are critical to accessing molecules of industrial importance in light of the present ecological and economic climate. Here, it is shown that umpolung reactivity of carbonyl compounds can be used for nucleophilic additions to yield a diverse array of valuable alcohols as an alternative to using stoichiometric organometallic reagents.


Entomopathogenic bacteria use multiple mechanisms for bioactive peptide library design pp379 - 386

Xiaofeng Cai, Sarah Nowak, Frank Wesche, Iris Bischoff, Marcel Kaiser, Robert Fürst & Helge. B. Bode

doi:10.1038/nchem.2671

no alt info

Nature has evolved a variety of different mechanisms to generate chemical diversity; however, the reactions responsible for generating such diverse chemical libraries are often not clear. Now, the mechanisms employed by entomopathogenic bacteria for the biosynthesis of a large family of bioactive peptides have been identified. These include substrate promiscuity, enzyme cross-talk and enzyme stoichiometry.


Seven enzymes create extraordinary molecular complexity in an uncultivated bacterium pp387 - 395

Michael F. Freeman, Maximilian J. Helf, Agneya Bhushan, Brandon I. Morinaka & Jörn Piel

doi:10.1038/nchem.2666

no alt info

Polytheonamides are giant peptide toxins produced by the uncultivated sponge bacterium Entotheonella factor. The biosynthesis of polytheonamides involves up to 50 post-translational modifications. Now, heterologous expression in Escherichia coli and Rhizobium hosts have shown that a minimalistic, iterative enzyme set introduces this exceptional molecular complexity via epimerizations, C-/N-methylations, hydroxylations, dehydration and proteolytic maturation.


An iron-catalysed C–C bond-forming spirocyclization cascade providing sustainable access to new 3D heterocyclic frameworks pp396 - 401

Kirsty Adams, Anthony K. Ball, James Birkett, Lee Brown, Ben Chappell, Duncan M. Gill, P. K. Tony Lo, Nathan J. Patmore, Craig. R. Rice, James Ryan, Piotr Raubo & Joseph B. Sweeney

doi:10.1038/nchem.2670

no alt info

The use of earth-abundant metals in catalysis is a prerequisite for the development of sustainable synthetic chemical processes for the future. Now, biomass-derived chemicals can be used in an efficient iron-catalysed reaction to make complex spirocycles. The resulting products contain two asymmetric centres that are furnished in high stereoselectivity.


Top

In Your Element

Iterations of ytterbium p402

Alasdair Skelton & Brett F. Thornton

doi:10.1038/nchem.2755

Alasdair Skelton and Brett F. Thornton examine the twisting path through the several discoveries of ytterbium, from the eighteenth century to the present.


Top