Abstract
Sequence data from slowly evolving macromolecules have been recognized for at least two decades1 to be of value in reconstructing the ordering and timing of evolutionary events as far back as the origins of eukaryotes and prokaryotes2,3. Fungi are particularly suitable organisms for investigating phylogenetic relationships by this approach. The fossil record is poor4 and morphological characters are limited, providing few reliable markers of phylogenetic relationships. To date, nearly all molecular sequence data from fungi have been derived from ascomycetes5,6, primarily yeasts. Basidiomycetes are represented by only one relevant macromolecular sequence, that of the cytochrome c from Ustilago sphaerogena7. Here, we report 5S ribosomal RNA (rRNA) nucleotide sequences from eight species of basidiomycetes. These sequences define two distinct clusters that correlate with the presence or absence of cell wall septal dolipores rather than with the traditional division of these species between the classes8,9 Heterobasidiomycetae and Homobasidiomycetae. We believe this provides a striking example of the utility of molecular sequence data in distinguishing reliable morphological or cytological marker(s) for a given phylogenetic lineage.
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References
Zuckerkandl, E. & Pauling, L. in Horizons in Biochemistry (eds Kasha, M. & Pullman, B.) 189–225 (Academic, New York, 1962).
Schwartz, R. M. & Dayhoff, M. O. Science 199, 395–403 (1978).
Woese, C. R. & Fox, G. E. Proc. natn. Acad. Sci. U.S.A. 74, 5088–5090 (1977).
Tiffney, B. H. & Barghoorn, E. S. Occas. Pap. Farlow Herb. Cryptogam. Bot. Harv. Univ. 7, 1–42 (1974).
Schwartz, R. M. & Dayhoff, M. O. in Atlas of Protein Sequences and Structure Vol. 5, Suppl. 3 (ed. Dayhoff, M. O.) 28–43 (National Biomedical Research Foundation, Washington DC, 1979).
Erdmann, V. A. Nucleic Acids Res. 10, r93–r114 (1982).
Bitar, K. G., Vinogradov, S. N., Nolan, C., Weiss, L. J. & Margoliash, E. Biochem. J. 129, 561–569 (1972).
Patouillard, N. thesis, Paris Univ. (1900).
Whittaker, R. H. Science 163, 150–160 (1969).
Donis-Keller, H., Maxam, A. M. & Gilbert, W. Nucleic Acids Res. 4, 2527–2538 (1977).
MacKay, R. M., Gray, M. W. & Doolittle, W. F. Nucleic Acids Res. 8, 4911–4917 (1980).
Peattie, D. A. Proc. natn. Acad. Sci. U.S.A. 76, 1760–1764 (1979).
Donis-Keller, H. Nucleic Acids Res. 8, 3133–3142 (1980).
Boguski, M. S., Heiter, P. A. & Levy, C. C. J. biol. Chem. 255, 2160–2163 (1980).
Böhm, S., Fabian, H. & Welfle, H. Acta biol. med. germ. 40, K19–K29 (1981).
Diels, L., DeBaere, R., Vandenberghe, A. & DeWachter, R. Nucleic Acids Res. 9, 5141–5144 (1981).
Leuhrsen, K. R. & Fox, G. E. Proc. natn. Acad. Sci. U.S.A. 78, 2150–2154 (1981).
Garrett, R. A., Douthwaite, S. & Noller, H. F. Trends biochem. Sci. 6, 137–139 (1981).
Bessey, E. A. Morphology and Taxonomy of Fungi, 436–463 (Hafner, New York, 1961).
Olive, L. S. J. Elisha Mitchell scient. Soc. 84, 261–266 (1967).
Long, E. O. & Dawid, I. B. A. Rev. Biochem. 49, 727–764 (1980).
Selker, E. U. et al. Cell 24, 819–828 (1981).
Ford, P. J. & Brown, R. D. Cell 8, 485–493 (1976).
Mashkova, T. D. et al. Nucleic Acids Res. 9, 2141–2151 (1981).
Bracker, C. E. A. Phytopath. 5, 343–374 (1967).
Gull, K. in The Filamenteous Fungi Vol. 3 (eds Smith, J. E. & Berry, D. R.) 78–93 (Wiley, New York, 1978).
Moore, R. T. & McAlear, J. H. Am. J. Bot. 49, 86–100 (1962).
Blanz, P. Z. Mykologia 44, 91–107 (1978).
Kreger-van Rij, N. J. W. & Veenhuis, M. J. gen. Microbiol. 68, 87–95 (1971).
Haskins, R. H. Can. J. Bot. 53, 1139–1148 (1975).
Martinez, A. T. Stud. Mycol. 19, 50–57 (1979).
Saito, I., Suzui, T. & Baba, T. Trans. Mycol. Soc. Jpn 21, 187–192 (1980).
Deml, G. Z. Pilzkunde 43, 291–303 (1977).
Khan, S. R. J. gen. Microbiol. 97, 339–342 (1976).
Moore, R. T. Mycologia 70, 1008–1024 (1978).
Kreger-van Rij, N. J. W. in The Fungi: an Advanced Treatise Vol. 4A (eds Ainsworth, C. G., Sparrow, F. K. & Sussman, A. S.) 11–32 (Academic, New York, 1973).
Khan, S. R. & Talbot, P. H. B. Mycologia 68, 1027–1036 (1976).
Anderson, J., Andresini, W. & Delihas, N. J. biol. Chem. (in the press).
Baba, M. L., Darga, L. L., Goodman, M. & Czelusniak, J. J. molec. Evol. 17, 197–213 (1981).
Talbot, P. H. B. Persoonia 3, 371–406 (1965).
Lowy, B. Taxon 17, 118–127 (1968).
Shaffer, R. L. Mycologia 67, 1–19 (1975).
Moore, R. T. Antonie van Leewenhoek Ned. Tindsch. Hyg. 38, 567–584 (1972).
Dykstra, M. J. Can. J. Bot. 52, 971–972 (1974).
Khan, S. R. & Kimbrough, J. W. Can. J. Bot. 58, 642–647 (1980).
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Walker, W., Doolittle, W. Redividing the basidiomycetes on the basis of 5S rRNA sequences. Nature 299, 723–724 (1982). https://doi.org/10.1038/299723a0
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DOI: https://doi.org/10.1038/299723a0
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