Skip to main content

Thank you for visiting nature.com. You are using a browser version with limited support for CSS. To obtain the best experience, we recommend you use a more up to date browser (or turn off compatibility mode in Internet Explorer). In the meantime, to ensure continued support, we are displaying the site without styles and JavaScript.

  • Biotechnical Methods Section BTS
  • Published:

Biotechnical Methods Section (BTS)

Quantitation of minimal residual disease in acute promyelocytic leukemia patients with t(15;17) translocation using real-time RT-PCR

Abstract

We took advantage of a recently developed system allowing performance of real-time quantitation of polymerase chain reaction to develop a quantitative method of measurement of PML-RARα transcripts which are hallmarks of acute promyelocytic leukemia (APL) with t(15;17) translocation. Indeed, although quantitation of minimal residual disease has proved to be useful in predicting clinical outcome in other leukemias such as chronic myeloid leukemia or acute lymphoblastic leukemia, no quantitative data have been provided in the case of APL. We present here a method for quantitation of the most frequent subtypes of t(15;17) transcripts (namely bcr1 and bcr3). One specific forward primer is used for each subtype in order to keep amplicon length under 200 bp. The expression of PML-RARα transcripts is normalized using the housekeeping porphobilinogen deaminase (PBGD) gene. This technique allows detection of 10 copies of PML-RARα or PBGD plasmids, and quantitation was efficient up to 100 copies. One t(15;17)-positive NB4 cell could be detected among 106 HL60 cells, although quantitation was efficient up to one cell among 105. Repeatability and reproducibility of the method were satisfying as intra- and inter-assay variation coefficients were not higher than 15%. The efficiency of the method was finally tested in patient samples, showing a decrease of the PML-RARα copy number during therapy, and an increase at the time of relapse.

This is a preview of subscription content, access via your institution

Access options

Buy this article

Prices may be subject to local taxes which are calculated during checkout

Figure 1
Figure 2
Figure 3

Similar content being viewed by others

References

  1. De The H, Chomienne C, Lanotte M, Degos L, Dejean A . The t(15;17) translocation of acute promyelocytic leukaemia fuses the retinoic acid receptor alpha gene to a novel transcribed locus Nature 1990 347: 558–561

    Article  CAS  Google Scholar 

  2. Pandolfi PP, Alcalay M, Fagioli M, Zangrilli D, Mencarelli A, Diverio D, Biondi A, Lo Coco F, Rambaldi A, Grignani F, Rochette-Egly C, Gaube MP, Chambon P, Pelicci PG . Genomic variability and alternative splicing generate multiple PML-RARα transcripts that encode aberrant PML proteins and PML-RARα isoforms in acute promyelocytic leukemia EMBO J 1992 11: 1397–1407

    Article  CAS  Google Scholar 

  3. Geng JP, Tong JH, Dong S, Wang ZY, Chen SJ, Chen Z, Zelent A, Berger R, Larsen CJ . Localization of the chromosome 15 breakpoints and expression of multiple PML-RARa transcripts in acute promyelocytic leukemia: a study of 28 Chinese patients Leukemia 1996 7: 20–26

    Google Scholar 

  4. Fenaux P, Chastang C, Chevret S, Sanz M, Dombret H, Archimbaud E, Fey M, Rayon C, Huguet F, Sotto JJ, Cony Makhoul P, Travade P, Solary E, Fegueux N, Bordessoule D, San Miguel J, Link H, Desablens B, Stamatoulas A, Deconinck E, Maloisel F, Castaigne S, Preudhomme C, Degos L, European APL group . A randomized comparison of all trans retinoic acid followed by chemotherapy and ATRA plus chemotherapy, and the role of maintenance therapy in newly diagnosed acute promyelocytic leukemia Blood 1999 94: 1192–1200

    CAS  PubMed  Google Scholar 

  5. Cave H, Van der Werff ten Bosch J, Suciu S, Guidal C, Waterkeyn C, Otten J, Bakkus M, Thielemans K, Grandchamp B, Vilmer E . Clinical significance of minimal residual disease in childhood acute lymphoblastic leukemia New Engl J Med 1998 339: 591–598

    Article  CAS  Google Scholar 

  6. Lin F, van Rhee F, Goldman JM, Cross NCP . Kinetics of increasing Bcr-Abl transcripts numbers in chronic myeloid leukemia patients who relapse after bone marrow transplantation Blood 1996 87: 4473–4478

    CAS  PubMed  Google Scholar 

  7. Seale JRC, Varma S, Swirsky DM, Pandolfi PP, Goldman JM, Cross NCP . Quantification of PML-RARα transcripts in acute promyelocytic leukemia: explanation for the lack of sensitivity of RT-PCR for the detection of minimal residual disease and induction of the leukaemia-specific mRNA by alpha interferon Br J Haematol 1996 95: 95–101

    Article  CAS  Google Scholar 

  8. Gibson UEM, Heid CA, Williams PM . A novel method for real time quantitative RT-PCR Genome Res 1996 6: 995–1001

    Article  CAS  Google Scholar 

  9. Mensink E, van de Locht A, Schattenberg A, Linders E, Schaap N, Geurts van Kessel A, de Witte T . Quantitation of minimal residual disease in Philadelphia chromosome positive chronic myeloid leukaemia patients using real-time quantitative RT-PCR Br J Haematol 1998 102: 768–774

    Article  CAS  Google Scholar 

  10. Marcucci G, Livak KJ, Bi W, Strout MP, Bloomfield CD, Caliguri MA . Detection of minimal residual disease in patients with AML1/ETO-associated acute myeloid leukemia using a novel quantitative reverse transcription polymerase chain reaction assay Leukemia 1998 12: 1482–1489

    Article  CAS  Google Scholar 

  11. Pongers-Willemse MJ, Verhagen OJHM, Tibbe GJM, Wijkhuijs AJM, de Haas V, Roovers E, van der Schoot CE, van Dongen JJM . Real-time quantitative PCR for the detection of minimal residual disease in acute lymphoblastic leukemia using junctional region specific TaqMan probes Leukemia 1998 12: 2006–2014

    Article  CAS  Google Scholar 

  12. Castaigne S, Balitrand N, de The H, Dejean A, Degos L, Chomienne C . A PML/retinoic acid receptor alpha fusion transcript is constantly detected by RNA-based polymerase chain reaction in acute promyelocytic leukemia Blood 1992 79: 3110–3115

    CAS  PubMed  Google Scholar 

  13. Holland PM, Abramson RD, Watson R, Gelfand GH . Detection of specific polymerase chain reaction products by utilizing the 5′ to 3′ exonuclease activity of Thermus aquaticus DNA polymerase Proc Natl Acad Sci USA 1991 88: 7276–7280

    Article  CAS  Google Scholar 

  14. Heid CA, Stevens J, Livak KJ, Williams PM . Real time quantitative PCR Genome Res 1996 6: 986–994

    Article  CAS  Google Scholar 

  15. Chretien S, Dubart A, Beaupain D, Raich N, Grandchamp B, Rosa J, Goosens M, Romeo PH . Alternative transcription and splicing of the human porphobilinogen deaminase gene result either in tissue-specific or in housekeeping expression Proc Natl Acad Sci USA 1988 85: 6–10

    Article  CAS  Google Scholar 

  16. Fincke J, Fritzen R, Ternes P, Lange W, Dolken G . An improved strategy and a useful housekeeping gene for RNA analysis from formalin-embedded tissues by PCR Biotechniques 1993 14: 448–453

    Google Scholar 

  17. Lee LG, Connell CR, Bloch W . Allelic discrimination by nick-translation PCR with fluorogenic probes Nucleic Acids Res 1993 21: 3761–3766

    Article  CAS  Google Scholar 

  18. Fink L, Seeger W, Ermert L, Hanze J, Stahl U, Grimminger F, Kummer W, Bohle RM . Real-time quantitative RT-PCR after laser-assisted cell picking Nature Med 1998 4: 1329–1333

    Article  CAS  Google Scholar 

  19. Lo Coco F, Diverio D, Pandolfi PP, Biondi A, Rossi V, Avvisati G, Rambaldi A, Arcese W, Petti MC, Meloni G, Mandeli F, Grignani F, Macera G, Barbui T, Pelicci PG . Molecular evaluation of residual disease as a predictor of relapse in acute promyelocytic leukemia Lancet 1992 340: 1437–1438

    Article  CAS  Google Scholar 

  20. Miller WH, Kakizuka A, Frankel SR, Warrel RP, DeBlasio A, Levine K, Evans RM, Dmitrovsky E . Reverse transcription polymerase chain reaction for the rearranged retinoic acid receptor alpha clarifies diagnosis and detects minimal residual disease in acute promyelocytic leukemia Proc Natl Acad Sci USA 1992 89: 2694–2698

    Article  CAS  Google Scholar 

  21. Grimwade D, Howe K, Langabeer S, Burnett S, Goldstone A, Solomon E . Minimal residual disease detection in acute promyelocytic leukemia by reverse-transcriptase PCR: evaluation of PML-RAR alpha and RAR alpha-PML assessment in patients who ultimately relapse Leukemia 1996 10: 61–66

    CAS  PubMed  Google Scholar 

  22. Chomienne C . RT-PCR in acute promyelocytic leukemia: second workshop of the European Retinoic Group Leukemia 1996 10: 368–371

    Google Scholar 

  23. Bolufer P, Barragan E, Sanz MA, Martin G, Bornstein R, Colomer D, Delgado MD, Gonzalez M, Marugan I, Roman J, Gomez MT, Anguita E, Diverio D, Chomienne C, Briz M . Preliminary experience in external quality control of RT-PCR PML-RAR alpha detection in promyelocytic leukemia Leukemia 1998 12: 2024–2028

    Article  CAS  Google Scholar 

  24. Gerard CJ, Olsson K, Ramanathan R, Reading C, Hanania EG . Improved quantitation of minimal residual disease in multiple myeloma using real-time polymerase chain reaction and plasmid-DNA complementarity determining in region III standards Cancer Res 1998 58: 3957–3964

    CAS  PubMed  Google Scholar 

  25. Henry JM, Sykes PJ, Brisco MJ, To LB, Juttner CA . Comparison of myeloma cell contamination of bone marrow and peripheral blood stem cell harvests Br J Haematol 1996 92: 614–619

    Article  CAS  Google Scholar 

Download references

Acknowledgements

This work was supported by the Ligue Contre le Cancer des Hauts de Seine and the Association pour la Recherche contre le Cancer.

Author information

Authors and Affiliations

Authors

Rights and permissions

Reprints and permissions

About this article

Cite this article

Cassinat, B., Zassadowski, F., Balitrand, N. et al. Quantitation of minimal residual disease in acute promyelocytic leukemia patients with t(15;17) translocation using real-time RT-PCR. Leukemia 14, 324–328 (2000). https://doi.org/10.1038/sj.leu.2401652

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1038/sj.leu.2401652

Keywords

This article is cited by

Search

Quick links