Abstract
In order to identify novel single nucleotide polymorphisms (SNPs), we sequenced a 940 bp region of the 5′ flanking region of the IL-6 gene in 63 normal African-Americans. We identified a biallelic (G/C) SNP at position −573 relative to the transcription start site (−573C allele frequency 0.095). This SNP, together with SNPs at −598 and −174, allows identification of five probable haplotypes. Haplotypes containing the −174C allele, which has been associated with lower plasma IL-6 levels, were uncommon (4%). These haplotypes may influence IL-6 gene transcription and thus may contribute to racial differences in the prevalence of inflammatory diseases.
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Supported by grants from the Emory Medical Care Foundation (J McNicholl), Arthritis Foundation (T Kuffner), NIH R01A-A44384 (L Moreland), and a grant from the Charles E Culpeper Foundation (L Moreland).
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Osiri, M., McNicholl, J., Moreland, L. et al. A novel single nucleotide polymorphism and five probable haplotypes in the 5′ flanking region of the IL-6 gene in African-Americans. Genes Immun 1, 166–167 (1999). https://doi.org/10.1038/sj.gene.6363652
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DOI: https://doi.org/10.1038/sj.gene.6363652
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