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Herbicide resistance caused by spontaneous mutation of the cytoskeletal protein tubulin

Abstract

The dinitroaniline herbicides (such as trifluralin and oryzalin) have been developed for the selective control of weeds in arable crops. However, prolonged use of these chemicals has resulted in the selection of resistant biotypes of goosegrass, a major weed. These herbicides bind to the plant tubulin protein but not to mammalian tubulin1. Here we show that the major α-tubulin gene of the resistant biotype has three base changes within the coding sequence. These base changes swap cytosine and thymine, most likely as the result of the spontaneous deamination of methylated cytosine. One of these base changes causes an amino-acid change in the protein: normal threonine at position 239 is changed to isoleucine. This position is close to the site of interaction between tubulin dimers in the microtubule protofilament. We show that the mutated gene is the cause of the herbicide resistance by using it to transform maize and confer resistance to dinitroaniline herbicides. Our results provide a molecular explanation for the resistance of goosegrass to dinitroanaline herbicides, a phenomenon that has arisen, and been selected for, as a result of repeated exposure to this class of herbicide.

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Figure 1: Dinitroaniline-sensitive (S) and -resistant (R) biotypes of Eleusine indica (goosegrass).
Figure 2: A single base mutation results in an amino-acid difference between the goosegrass major α-tubulin gene from the sensitive biotype (EiStua1) and from the resistant biotype (EiRtua1).
Figure 3: DNA cassettes containing α/β-tubulin genes fused to the hybrid promoter containing the cauliflower mosaic virus (CaMV) 35S promoter and the maize alcohol dehydrogenase (adh1) intron 1 (35Si; ref. 17).
Figure 4: Response of control BMS calli and transformed BMS clones to dinitroaniline (trifuralin and oryzalin) herbicides, and to another antimicrotubule herbicide, pronamide, which has a different mode of action.
Figure 5: The α-tubulin gene product of resistant goosegrass biotypes is incorporated into the microtubule array.

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Acknowledgements

We thank J. Lowe and L. Amos for discussion about the structures of FtsZ and tubulin, E. Nogales and K. Downing for providing the coordinates of the αβ-tubulin dimer and K. Roberts and H. Dickinson for critical reading of the paper. This work was supported by the Biotechnology and Biological Sciences Research Council (R.G.A., T.R.W., P.J.H.) and, in part, by Zeneca Agrochemicals (J.R., S.B.). This paper is dedicated to the memory of the late Ray Ellis with whom the work was initiated.

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Correspondence to Patrick J. Hussey.

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Anthony, R., Waldin, T., Ray, J. et al. Herbicide resistance caused by spontaneous mutation of the cytoskeletal protein tubulin. Nature 393, 260–263 (1998). https://doi.org/10.1038/30484

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