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- Bioluminescence imaging
- 3-D reconstruction
- Diffusion tensor imaging
- Endoscopy
- Fluorescence imaging
- Functional magnetic resonance imaging
- Magnetic resonance imaging
- Magnetoencephalography
- Molecular imaging
- Optical imaging
- Positron-emission tomography
- Time-lapse imaging
- Ultrasound
- Viral tracing
- X-ray tomography
