Skip to main content

Thank you for visiting nature.com. You are using a browser version with limited support for CSS. To obtain the best experience, we recommend you use a more up to date browser (or turn off compatibility mode in Internet Explorer). In the meantime, to ensure continued support, we are displaying the site without styles and JavaScript.

  • News & Views
  • Published:

Genome informatics

Uncovering the genetic circuits that drive diseases

A hierarchical Bayesian method identifies cell-type specific changes in gene regulatory circuits in disease by integrating single-cell and three-dimensional measurements of the genome.

This is a preview of subscription content, access via your institution

Access options

Buy this article

Prices may be subject to local taxes which are calculated during checkout

Fig. 1: MAGICAL identifies cell-type specific gene regulatory circuits disrupted in disease.

References

  1. Kim, H. D., Shay, T., O’Shea, E. K. & Regev, A. Science 325, 429–32 (2009).

    Article  Google Scholar 

  2. Kim-Hellmuth, S. et al. Science 369, eaaz8528 (2020).

    Article  Google Scholar 

  3. Kreitmaier, P., Katsoula, G. & Zeggini, E. Trends Genet. 39, 46–58 (2022).

    Article  Google Scholar 

  4. Chen, X. et al. Nat. Comput. Sci. https://doi.org/10.1038/s43588-023-00476-5 (2023)

  5. Cao, J. et al. Science. 361, 1380–1385 (2018).

    Article  Google Scholar 

  6. Klemm, S. L., Shipony, Z. & Greenleaf, W. J. Nat. Rev. Genet. 20, 207–220 (2019).

    Article  Google Scholar 

  7. Schoenfelder, S. & Fraser, P. Nat. Rev. Genet. 20, 437–455 (2019).

    Article  Google Scholar 

  8. Nagano, T. et al. Nature 502, 59–64 (2013).

    Article  Google Scholar 

  9. Lähnemann, D. et al. Genome Biol. 21, 31 (2020).

    Article  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Pawel F. Przytycki.

Ethics declarations

Competing interests

The author declares no competing interests.

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Przytycki, P.F. Uncovering the genetic circuits that drive diseases. Nat Comput Sci 3, 584–585 (2023). https://doi.org/10.1038/s43588-023-00475-6

Download citation

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1038/s43588-023-00475-6

Search

Quick links

Nature Briefing

Sign up for the Nature Briefing newsletter — what matters in science, free to your inbox daily.

Get the most important science stories of the day, free in your inbox. Sign up for Nature Briefing