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Straightforward access to linear and cyclic polypeptides


Ring-opening polymerization of α-amino acid N-carboxyanhydrides (NCAs) is a powerful synthetic methodology for generating well-defined functional polypeptides. However, conventional procedures require a compromise between obtaining controlled microstructures and employing the optimized polymerization conditions. Specifically, a versatile method to access sequenced cyclic polypeptides remains challenging due to the difficulty in site-specific cyclization. Here we describe a general and straightforward method for the synthesis of both linear and cyclic polypeptides using organocatalytic living polymerization of NCAs. The use of an air-stable organocatalyst, imidazolium hydrogen carbonate, allows for the rapid and controlled polymerization of a variety of NCAs, leading to high conversion within a few minutes under mild conditions. Linear and cyclic block copolypeptides are also accessible simply by controlling the type of initiators and the order of addition of NCA monomers.


The desire to harvest the tunable and biomimetic functionality of biomedical macromolecules through synthetic analogues has spawned the development of polypeptide-based hybrid materials1,2,3. The remarkable applications of polypeptides in drug delivery, tissue engineering, sensing, and catalysis have simulated considerable efforts to develop routes for the synthesis of polypeptides with the desired structural and functional capabilities4,5,6,7,8. Work toward this end has mainly been pioneered by Deming and co-workers9,10,11. The ring-opening polymerization (ROP) of α-amino acid N-carboxyanhydrides (NCAs), initiated by amines or amine-derivatives (e.g., amine hydrochlorides12,13, amine trifluoroboranes14, and silazane derivatives15,16), has emerged as a versatile method due to their advantages, including being a metal-free procedure and the absence of any toxic impurities. Intensive mechanistic studies have shown that two competitive mechanisms (the normal amine mechanism and the activated monomer mechanism) lead to undesirable side reactions, preventing the formation of well-defined polypeptides with controlled molecular weights (MWs) and low polydispersity index (Đ)17,18. Moreover, this method is heavily time-dependent as polymerization usually proceeds over the course of more than 3 days. Although innovations employing new catalysts and/or optimized polymerization conditions have circumvented these problems19,20, these strategies are usually subject to a trade-off between obtaining controlled macromolecules and employing the optimized polymerization conditions: effective catalysts or high vacuum techniques may accelerate the polymerization, but also promote side reactions, making the system essentially impractical. Thus, the synthesis of polypeptides in a controlled manner and the avoidance of time-consuming processes remain formidable challenges.

Despite the crowning achievements in macromolecular topologies and manipulation of the thermal behaviour of linear polymers, exhaustive understanding of the cyclic analogues remains a work in progress. Their distinctive topological architecture imparts many characteristic properties to cyclic polymers, compared to their linear counterparts, such as novel micellar morphology, faster crystallization rate, lower intrinsic viscosity, and higher glass transition and melting temperature21,22,23,24. Variety of cyclic peptides have been discovered in nature and have various applications such as antibiotics and immunosuppressive agents. Zwitterionic ROP has recently been recognized as a fundamental strategy for the synthesis of cyclic polymers25,26. This appealing approach enables the generation of cyclic polypeptides (cPPeps), initiated by protic nucleophiles (pyridine, imidazole)27. Unexpectedly rapid precipitation of β-sheet lamellae of poly(l-alanine) prevented efficient cyclization and generated predominantly linear poly(l-alanine). Although a previously reported thermal technique can be used to generate cyclic polypeptides, this method is inherently limited by the type of NCA28. An efficient and facile strategy to access cPPeps with defined MWs is thus highly desirable.

In the wake of the pioneering study by Waymouth and co-workers, N-heterocyclic carbene (NHC)-mediated ROP of a variety of heterocyclic monomers has led to substantial advances in organocatalysis29,30,31,32. Extensive research has shown that persistent NHCs are privileged organocatalysts for metal-free polymerization because of their unique chemical characteristics, i.e., strong σ-donor and good Brønsted base properties33,34. We thus envisioned to employ organocatalysts in ROP of NCAs that have never been explored in polypeptide chemistry. Daniel et al. recently reported that free NHCs can be easily released from imidazolium hydrogen carbonates (denoted as [NHC(H)(HCO3)]) precursors via the formal loss of H2CO335,36, whereas this type of easier-to-handle and air-stable precatalysts have been hitherto poorly studied, especially for polymerization purposes.

Herein, we present the [NHC(H)(HCO3)]-mediated ROP of a broad scope of NCAs to access both linear polypeptides (lPPeps) and cPPeps in the presence and absence of a primary amine initiators, respectively (Fig. 1). Notably, the polymerization occurs very rapidly and high conversion is achieved within a few minutes under the well-optimized conditions. Moreover, linear and cyclic block copolypeptides are easily accessible by tuning the type of initiator and by sequential addition of monomers. This bifunctional organocatalysis strategy was developed based on the conjecture that:25,34,37 free NHCs can form a hydrogen bonding network with the initiating amines and the subsequently formed ω-amino terminus of the propagating chains (Fig. 2). This H-bonding interaction facilitate nucleophilic attack on the NCAs, thereby resulting in the rapid generation of lPPeps.21 While in the absence of amines, free NHCs might behave as a sole nucleophile to initiate NCAs and generate the imidazolium carbamate zwitterionic intermediate, allowing for subsequent intramolecular decarboxylation and chain propagation to yield cPPeps.

Fig. 1

Ring-opening polymerization of various NCAs. Synthesis of linear and cyclic polypeptides by using [NHC(H)(HCO3)] with diverse steric and electronic properties

Fig. 2

Proposed mechanism. Bifunctional organocatalysis strategy for [NHC(H)(HCO3)] mediated ROP of NCAs to access both linear and cyclic polypeptides in the presence and absence of a primary amine, respectively


Synthesis and characterization of polypeptides

As depicted in Fig. 2, free NHCs are released at room temperature from its [NHC(H)(HCO3)] precursor by formal loss of H2CO335. In the presence of a primary amine, the NHCs act as potent organocatalysts for the ROP of four representative types of NCAs (those with nonpolar side chains, benzyl or benzyloxy carbamate protected polar, basic, and acidic side chains), generating respective linear polypeptides with controlled MWs and low Đ values (Table 1, entries 1−7). 1H NMR spectroscopy analysis corroborated the lPPep structure with primary amino end groups (Supplementary Figures 17). While, in the absence of amine initiators, cPPeps with tunable ring sizes (degree of polymerization (DP) = 20−300) were also obtained (Table 1, entries 14−23), where the [NHC(H)(HCO3)] served as the sole initiator. 1H NMR spectra and electrospray ionization mass spectra (ESI MS) of the purified product clearly confirmed the proposed polymeric backbone with an NHC moiety affixed to the ring (Supplementary Figures 1520 and  32). The 1H−1H homonuclear correlation spectroscopy (COSY) of two poly(l-phenylalanine) samples independently prepared from 2b mediated ROP of 1c in the presence and absence of hexylamine (HxA) reveal the same phenylalanine unit, but entirely different initiator signals in upfield (Fig. 3). In order to get further insight into the mechanism of this protocol, we investigated the chain-end groups of these two independently produced polypeptides by matrix-assisted laser desorption/ionization-time of flight mass spectroscopy (MALDI-TOF MS), respectively. The MALDI-TOF MS spectra (Fig. 4 and Supplementary Figures 3338) reveal two series of well-distinguishable molecular ion peaks, which correspond to the lPPeps with amino chain ends and the cPPeps bearing an NHC moiety, respectively. More specifically, the spectra for cPPeps detected by using dithranol matrix (Fig. 4c, d and Supplementary Figures 3437) exhibit signals corresponding to “liberated” polypeptides that the NHC was dissociated from the macrocycles38, whereas structurally intact spirocyclic polypeptides are observed in Supplementary Figure 38 (by using 2,5-dihydroxybenzoic acid matrix). These results are consistent with the mechanistic scenario outlined in Fig. 2.

Table 1 Results of controlled ROP of various NCAs with [NHC(H)(HCO3)]
Fig. 3

1H−1H COSY spectra of polypeptides. a Linear poly(l-phenylalanine) (l-P(Phe)). b Cyclic poly(l-phenylalanine) (c-P(Phe))

Fig. 4

MALDI-TOF MS spectra of polypeptides. a Linear poly(l-alanine) (l-P(Ala)). c Cyclic poly(l-alanine) (c-P(Ala)) using dithranol matrix. b, d are the expanded spectra of (a), (c), respectively

Remarkably, all polymerizations are featured by high conversion at a significantly high rate, demonstrating the powerful mediating competence of the [NHC(H)(HCO3)]. Under optimal conditions, benzylamine-initiated polymerization of 1a reached 53% conversion in less than 5 min (entry 1 in Table 1). Both polymerizations of 1g in the presence and absence of HxA proceeded over 96% conversion after 10 min (Table 1, entries 6, 20).

Further evidence for the cyclic architecture of the resulting polypeptides was provided by using size-exclusion chromatography (SEC) with light-scattering, refractive index, and viscosity triple detection. Linear poly(γ-benzyl-l-glutamate) (l-PBLG) with Mn = 17.8 kg mol−1 and Đ = 1.07 was prepared using a [1g]0/[HxA]0/[2b]0 ratio of 80:1:0.2, whereas the cyclic analogue (c-PBLG) with Mn = 19.4 kg·mol−1 and Đ = 1.18 was synthesized using a [1g]0/[2b]0 ratio of 80:1 (Supplementary Table 1). As expected, the c-PBLGs eluted later and exhibited lower intrinsic viscosities than their linear analogues with similar MWs, which can be attributed to the smaller hydrodynamic volume of the cyclic topology (Fig. 5a). From the linear fits of the respective Mark–Houwink plot for the cyclic and linear PLBGs, the observed [ƞ]cyclic/[ƞ]linear ratio (approximately 0.79) deviated somewhat from the theoretical prediction for cyclic polymers (0.7)29,39,40, most probably due to the residual linear contaminants present in the mostly cyclic polymers (Fig. 5b). The nearly identical exponent values in the Mark–Houwink plot (0.81 versus 0.77) revealed both polymers possessing a random coil conformation in solution. However, the circular dichroism (CD) analysis for both polymers shows double peaks in the negative region at approximately λ = 200–220 nm (Fig. 5c), indicating the α-helix conformation of the PBLG backbone. The inconsistency of these two results may be ascribed to the polypeptide taking an imperfect helix in solution, which makes the α-helix depart from rigid rectilinearity and shows flexibility to some extent41. Hence, all results excluded possible conformational effects as being responsible for the intrinsic viscosity differences.

Fig. 5

Topology analysis. a Logarithmic plot of MW (log Mw) versus elution time. b Mark−Houwink plot for l-PBLGs (red line) and c-PBLGs (blue line). c CD spectra of l-PBLGs (red line) and c-PBLGs (blue line) with a concentration of 0.2 mg mL−1 in THF

To assess the versatility of the [NHC(H)(HCO3)]-mediated ROP of NCAs, we investigated the polymerization of 1f (entry 8 in Table 1) using phosphatidylethanolamine (PE) as an initiator, resulting in an attractive synthesis of the PE-b-poly(Z-Lys) (PE-b-PZLL) bioconjugate. The 1H NMR spectra confirmed the formation of the desired chimeric bioconjugate (Supplementary Figures 89). Methoxypolyethylene glycol amine (mPEG-NH2) could also initiate to yield the desired PBLG PEGylated product (Supplementary Figures 1011).

In an attempt to broaden the scope of such a prominent precatalyst, several [NHC(H)(HCO3)] precursors with diverse steric and electronic properties were utilized to mediate the ROP of 1g (Table 1, entries 6, 9−11). Intriguingly, the controlled polymerizations yielded linear polypeptides with predictable MWs and Đ < 1.3, indicating that all of these promising [NHC(H)(HCO3)] precatalysts permit excellent control over MW and Đ. Besides, the effect of the initial [NHC(H)(HCO3)] concentration on control of the MW of the linear polymers was evaluated for the polymerization of 1f with varying concentrations of 2b and keeping initial monomer and HxA concentrations constant under the standard conditions (Table 1, entries 7, 12, and 13). The minor variation of MW with [2b]0 concentration implies that 2b simply acts as an effective catalyst to promote the polymerization. Additionally, the protected groups can be easily deprotected by treating with HBr in trifluoroacetic acid, as exemplified by linear PBLG, PZLL, and PE-b-PZLL (Supplementary Figures 1214).

Kinetic study

[NHC(H)(HCO3)] had remarkable control over most of polymerizations tested. Taking 2b-mediated ROP of 1g as an example (Fig. 6a), the resultant c-PBLGs display linearly increased MWs, nearly identical to the expected MWs, as the feeding monomer/initiator ([M]0/[I]0) ratios from 20 to 200. At [M]0/[I]0 ratio of 300/1, the obtained DP was about 233, nearly 22.4% deviation from the expected DP (as shown in Table 1, entry 23). Furthermore, the MWs of c-PBLG increase linearly with the conversion of 1g (Fig. 6b), verifying the living nature of polymerizations. Preliminary kinetic investigations of c-PBLG further corroborate the living character. The plot of ln([M]0/[M]) versus time fits well to a linear theoretical line, suggesting that the polymerization proceeds with a first-order kinetic character on the 1g concentration and gives the observed polymerization rate constant kobs = 0.265 ± 0.01 min−1 (Fig. 6c). All these experimental data confirmed that the ROP of 1g mediated by 2b proceeded in a controlled/living way. Similar living feature was also observed for l-PLBGs, as evidenced by the control experiments for the polymerization of 1g in the presence of HxA (Supplementary Figure 39).

Fig. 6

Kinetic study. a Plot of Mn and Đ versus monomer/initiator ([M]0/[I]0) ratio. b Plot of Mn and Đ versus monomer conversion for c-PBLG ([M]0/[I]0 = 50:1, [M]0 = 0.3 M). c Kinetic plot of ln ([M]0/[M]) versus time for c-PBLG ([M]0/[I]0 = 50:1, [M]0 = 0.3 M)

Copolymerization of Bn-Glu NCA and Z-Lys NCA

In analogy with the living feature of the propagating chains, a chain extension experiment was conducted by utilizing the c-PBLG (DP = 30) macroinitiator prepared by 2b-mediated polymerization of 1g ([1g]0 = 0.2 M, [1g]0/[2b]0 = 30:1). After complete conversion of 1g, a second batch of 1f ([1f]0/[2b]0 = 70:1) was added to the reaction mixture to allow for further chain propagation (Supplementary Table 2). 1H and 13C NMR analyses (Supplementary Figures 2122) of the resultant copolymer reveal significant resonance signals for the PZLL unit, as compared to c-PBLG. 1H, 1H-COSY, and HSQC spectral analyses (Supplementary Figures 23, 24) further confirm the formation of the anticipated cyclic block copolypeptides (c-(PBLG-b-PZLL)). Based on comparison of c-PBLG and c-(PBLG-b-PZLL), for example, the 1H, 1H-COSY spectra present four representative upfield signals for the methylene protons of c-(PBLG-b-PZLL), strongly suggesting the formation of the anticipated c-(PBLG-b-PZLL). Encouraged by these initial findings, linear block copolypeptides (l-(PBLG-b-PZLL), [1g]0/[1f]0/[HxA]0/[2b]0 = 20:60:1:0.2) were also accessed by using a l-PLBG (DP = 20) macroinitiator (Supplementary Figure 25). SEC analysis of the resulting polymers obtained prior to and after the addition of the second monomer shows unimodal distributions and the increase in the MWs of the polymer agreed reasonably well with the theoretically predicted value, suggesting controlled chain extension and successful synthesis of cyclic and linear block copolypeptides (Fig. 7).

Fig. 7

Chain extension experiment. a Representative SEC chromatograms of l-PBLG macroinitiator (black curve) and l-(PBLG-b-PZLL) (red curve). b c-PBLG Macroinitiator (black curve) and c-(PBLG-b-PZLL) (red curve)

Mechanistic insight of [NHC(H)(HCO3)]-mediated ROP

It is well known that the propagation is slow for the normal amine mechanism due to the weak nucleophilic ω-amino group of the propagating chain21. We thus speculate that the aforementioned H-bonding interaction continues activating the subsequently formed ω-amino terminus of the propagating chains, resulting in the rapid generation of lPPeps. Toward this end, FT-IR spectra were recorded to verify the existence of H-bonding. As the mole ratio of [2c]/[HxA] increases from 0 to 3 (Supplementary Figure 40), N−H stretching vibration peaks at 3378 cm−1 and 3295 cm−1 shift to lower wavenumbers, whereas N−H bending vibration peak at 1586 cm−1 shifts to higher one. The formation of H-bonding causes the red/blue shifts of N−H stretching/bending vibration42,43. For further demonstrating the H-bonding interaction, 1H NMR spectra were collected for equimolar mixtures of 2b and HxA in CDCl3 at room temperature (Supplementary Figure 26). The equilibrium between 2b and imidazolium-2-carboxylates is entirely disrupted by the addition of HxA35, accompanied by the disappearance of the signals of the amide protons of HxA at 1.03 ppm and the appearance of a new broad peak at 3.14 ppm, indicative of the H-bonding interaction between 2b and HxA. To gain deep insight into this new broad peak, variable temperature 1H NMR spectra of the same mixtures were recorded at temperatures ranging from 25 to 45 °C (Supplementary Figure 27)44. The corresponding signal at 3.14 ppm shifts to upfield as temperature increases from 25 to 45 °C, implying the significantly temperature-dependent behaviour of H-bonding interaction. Thus, the results collected support the suggested H-bonding network conjecture. Even though the exact polymerization mechanism for generating cPPeps is not clear at this stage, most probably [NHC(H)(HCO3)] acts as the nucleophile to initiate NCAs.


In summary, the [NHC(H)(HCO3)]-mediated procedure presented in this work not only permits the rapid and efficient synthesis of well-defined polypeptides via an ROP of a variety of NCAs, but also provides control over the polypeptide architecture. The living nature of this process allows for the straightforward access to both linear and cyclic block copolypeptides simply by tuning the type of initiators and by sequential addition of NCAs. More importantly, the [NHC(H)(HCO3)] salts are versatile and easy-to-handle precatalysts for the precise polypeptides synthesis, without particular precautions of storage. This strategy opens up opportunities for the practical use of these masked NHCs in various NHC-catalysed macromolecular reactions, and enables bulk-scale synthesis, potentially providing an avenue for practical implementation in the design of diverse polypeptide-based hybrid materials. Further efforts are underway to elucidate the mechanistic and kinetic features of this organocatalysis machinery in detail.


Synthesis and characterization

See Supplementary Methods, Supplementary Tables 13, and Supplementary Figures 143 (1H and 13C NMR spectra, MALDI-TOF and ESI MS spectra). The results of independently synthesized NHCs mediated the polymerization of NCAs to generate both linear and cyclic polypeptides are available in Supplementary Figures 2831 and 43.

General procedures for synthesis polypeptides

Linear polypeptides were synthesized according to the following steps. 1g (263.25 mg, 1 mmol) was added to the Schlenk flask with 4.5 mL of DMF. Molecular sieves were subsequently added into the reaction mixture to trap the water released from the [NHC(H)][HCO3]. n-Hexylamine (2.7 µL, 2 × 10−5 mol) was introduced into the solution, and a predetermined amount of 2b/DMF stock solution (500 µL, 1 × 10−5 mol, 0.02 M) was then added to the reaction mixture using a syringe. The reaction mixture was stirred for an appropriate time at room temperature and the conversion of NCA was determined by 1H NMR spectrum of an aliquot of reaction mixture. After the desired period, the polymerization was quenched by adding 10 mL of methanol. The quenched mixture was further precipitated by adding excess amount of methanol. After sonication and centrifugation twice to remove the unreacted monomers, the white solid was dried under vacuum. A similar procedure was employed for the preparation of the cyclic polypeptides in the absence of amine initiators.

General procedures for synthesis copolypeptides

Linear copolypeptides were synthesized according to the following procedures. 1g polymerization ([1g]0 = 0.2 M, [1g]0/[I]0 = 20:1, [2b]0 = 2.0 mM) was carried out by the same procedure as mentioned above. Aliquots of the reaction mixture were taken and the MW of the polypeptides was analysed by SEC and the monomer conversion was determined by 1H NMR. 1f ([1f]0/[I]0 = 60:1) dissolved in 2 mL DMF was then added to the solution and the mixture was stirred for an additional 30 min to reach complete conversion. The solution was precipitated with excess methanol. After sonication and centrifugation twice to remove unreacted monomers, the white solid was dried under vacuum to afford the linear block copolypeptides. The final products were analysed by SEC and 1H NMR. A similar procedure was employed for the preparation of cyclic copolypeptides in the absence of amine initiators.

Data availability

The datasets generated and analysed during the current study are available from the corresponding authors on reasonable request.


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This work was supported by the Basic Science Research Program through the National Research Foundation of Korea (2015R1D1A1A09057372). The authors also thank the BK21 PLUS Program for partial financial support.

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Y.Z., R.L. and I.K. conceived the idea and designed the experiments. Y.Z. and H.J. performed the experiments. Y.Z., W.S., R.A., and I.K. participated in data analyses and discussions. Y.Z. and I.K. co-wrote the manuscript.

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Correspondence to Il Kim.

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Zhang, Y., Liu, R., Jin, H. et al. Straightforward access to linear and cyclic polypeptides. Commun Chem 1, 40 (2018).

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