Skip to main content

Thank you for visiting You are using a browser version with limited support for CSS. To obtain the best experience, we recommend you use a more up to date browser (or turn off compatibility mode in Internet Explorer). In the meantime, to ensure continued support, we are displaying the site without styles and JavaScript.

Omega 3 fatty acids stimulate thermogenesis during torpor in the Arctic Ground Squirrel


Omega 3 polyunsaturated fatty acids (PUFAs) influence metabolism and thermogenesis in non-hibernators. How omega 3 PUFAs influence Arctic Ground Squirrels (AGS) during hibernation is unknown. Prior to hibernation we fed AGS chow composed of an omega 6:3 ratio approximately 1:1 (high in omega 3 PUFA, termed Balanced Diet), or an omega 6:3 ratio of 5:1 (Standard Rodent Chow), and measured the influence of diet on core body temperature (Tb), brown adipose tissue (BAT) mass, fatty acid profiles of BAT, white adipose tissue (WAT) and plasma as well as hypothalamic endocannabinoid and endocannabinoid-like bioactive fatty acid amides during hibernation. Results show feeding a diet high in omega 3 PUFAs, with a more balanced omega 6:3 ratio, increases AGS Tb in torpor. We found the diet-induced increase in Tb during torpor is most easily explained by an increase in the mass of BAT deposits of Balanced Diet AGS. The increase in BAT mass is associated with elevated levels of metabolites DHA and EPA in tissue and plasma suggesting that these omega 3 PUFAs may play a role in thermogenesis during torpor. While we did not observe diet-induced change in endocannabinoids, we do report altered hypothalamic levels of some endocannabinoids, and endocannabinoid-like compounds, during hibernation.


Hibernation is composed of periods of radically reduced whole body metabolism and core body temperature (Tb) that last for weeks (torpor bouts) which are regularly interrupted by interbout arousals (IBA) when metabolism and Tb briefly return to euthermic levels1,2. AGS fuel the majority of their whole-body metabolism from fat stores through the hibernation season while fasting2,3. It is well-documented that specific types of lipids can regulate hibernation; the omega 6 polyunsaturated fatty acid (PUFA) linoleic acid (LA) has been known for decades to influence Tb and duration of torpor bouts in multiple species4,5,6,7,8,9,10. Fewer studies have investigated omega 3 PUFAs with conflicting results showing feeding omega 3 PUFAs prior to hibernation (1) inhibited hibernation in marmots11, (2) delayed seasonal hibernation onset in garden dormice12 or (3) had no influence on hibernation in ground squirrels7.

Recent studies in non-hibernating animals show stimulation of brown adipose tissue (BAT) and metabolism from omega 3 PUFAs13,14. Omega 3 PUFA action on thermogenesis may arise from beiging of white adipose tissue (WAT), enhancement of mitochondrial respiration in BAT or modulating miRNAs through free fatty acid receptors13,15,16,17. Thermogenesis, as well as hibernation, are also both regulated centrally in part by the preoptic area of the hypothalamus18,19,20,21,22,23. Our laboratory previously highlighted the role of the hypothalamus in increasing thermogenic capacity through the hypothalamic-pituitary-thyroid (HPT) axis in hibernation24. Endocannabinoid signaling also modulates thermogenesis through actions on the hypothalamus25. PUFAs are the parent compounds of multiple endocannabinoid and endocannabinoid-like molecules, known to modulate metabolism, thermogenesis, circannual rhythms, neurotransmission, the immune system and satiation26,27,28,29,30,31,32,33,34. Further, hypothalamic endocannabinoid levels are maintained in hibernation compared to summer in marmots35. Major endocannabinoids, such as 2-arachidonoylglycerol (2-AG) and anandamide (AEA), are derived from the omega 6 PUFA arachidonic acid, and other N-acylethanolamides (NAEs) are derived from multiple types of other fatty acids, such as omega 3 PUFAs or saturated fatty acids36,37. Some studies have found that altering PUFAs and other fats in feed can influence bioactive NAEs and endocannabinoid levels in the brain34,36,38.

Given omega 3 PUFAs are prominent in some free-ranging hibernator diets39,40, we hypothesized omega 3 PUFAs influence hibernation. Specifically, we hypothesized that the Balanced Diet would increase thermogenesis and that hypothalamic bioactive endocannabinoids, such as 2-AG and AEA, are influenced by diet. To test this hypothesis, we fed either Balanced Diet (LabDiet, 9GU5, high in omega 3 PUFAs) or a control diet, Standard Rodent Chow (Mazuri #5663, high in omega 6 PUFAs), to juvenile AGS after capture and quarantine in July until animals hibernated and recorded Tb throughout hibernation. We then measured hypothalamic NAEs, plasma, WAT and BAT fatty acids and BAT tissue mass during torpor and IBA in December. Our findings support a role for omega 3 PUFAs in increasing AGS Tb in torpor and BAT mass during hibernation.


Feeding a diet high in omega 3 PUFAs with a more balanced omega 6:3 ratio increased core body temperature in torpor

Previous work in non-hibernating mammals indicate omega 3 PUFAs can influence metabolism and thermogenesis15,16, but hibernation studies have found conflicting evidence7,11,12. Therefore, the first goal was to measure the influence of omega 3 PUFAs on Arctic Ground Squirrels (AGS) core body temperature (Tb) during hibernation. Feeding the Balanced Diet, which is heavy in alpha-linolenic acid (ALA), increased Tb in torpid AGS (Table 1a, p = 0.020, t-test). Torpor bout length and Tb during interbout arousal were not influenced by diet (Table 1a). Balanced Diet (Lab Diet 9GU5) composition predominately differed from Standard Rodent Chow (Mazuri, #5663) by increased ALA and decreased linoleic acid (LA) (Table 1b).

Table 1 Balanced Diet increases core body temperature in torpid AGS.

Feeding a diet high in omega 3 PUFAs altered fatty acid composition of brown adipose tissue, white adipose tissue and plasma in hibernators

AGS fast and rely on fat stores during hibernation. We asked how feeding the Balanced Diet prior to hibernation influenced fatty acid content in hibernating fat deposits (visceral white adipose tissue, WAT), brown adipose tissue (BAT, a major thermogenic tissue) and plasma. Feeding the Balanced Diet significantly decreased the omega 6:3 ratio in BAT, WAT and plasma in hibernating animals during torpor and IBA compared to the Standard Rodent Chow (Fig. 1, p < 0.05, two-tailed t-test).

Figure 1

Omega 6:3 ratio is lower in plasma, WAT and BAT of Balanced Diet AGS. (a) Plasma, **p < 0.001, two tailed t-test, fall n = 9, torpor n = 7–8, IBA n = 4. (b) WAT, **p < 0.001, two-tailed t-test, fall n = 11–12, torpor n = 7–8, IBA n = 4. (c) BAT, **p < 0.001, two tailed t-test, torpor n = 7–8, IBA n = 4. (d) An example of time points when AGS were sampled over the hibernation season. Data shown are mean ± SEM. Black dots are individual data points.

Balanced Diet did not significantly alter total polyunsaturated fatty acids (PUFA), monounsaturated fatty acids (MUFA) or total free fatty acids (FFA) in AGS plasma compared to the control diet animals during the hibernation season (Fig. 2). Balanced Diet did, however, increase saturated fatty acids (SFA) in torpor compared to control AGS (Fig. 2, p < 0.05, two-tailed t-test, FDR corrected).

Figure 2

In plasma, Balanced Diet does not increase Total PUFAs (a), MUFAs (c) or Free Fatty Acids (d). Balanced Diet does increase saturated fatty acids during torpor (b). *p < 0.05, two-tailed t-test, FDR corrected. Data shown are mean ± SEM. Black dots are individual data points. Fall n = 9, Torpor n = 7–8, IBA n = 4 per diet.

Docosahexaenoic acid (DHA) and eicosapentaenoic acid (EPA) were elevated in balanced diet plasma while omega 6 PUFAs were unchanged

As DHA and EPA activate thermogenic mechanisms in non-hibernators15,16, we were interested in their presence in circulation and tissues during hibernation. AGS rely principally on fat stores during hibernation while fasting. In all tissues and plasma studied, feeding the Balanced Diet significantly increased DHA and EPA levels compared to the control diet (Fig. 3, two-tailed t-test, FDR corrected). While plasma alpha-linolenic acid (ALA) did not increase, Balanced Diet increased ALA in WAT and BAT (Fig. 3a,d,g, p < 0.05, two-tailed t-test, FDR corrected). During the hibernation season (torpor and IBA) plasma DHA was more abundant than in the fall regardless of diet (Fig. 3c, p < 0.05 one-way ANOVA, post hoc Tukey). DHA did not show the same seasonal increase in WAT (Fig. 3b) and fall samples were not available for BAT (Fig. 3g–i). BAT was the only tissue, however, where one of the omega-3 PUFAs (ALA) decreased during IBA (Fig. 3g). In BAT, ALA was significantly less during IBA than during torpor (Fig. 3g, p < 0.05, t-test, FDR corrected).

Figure 3

Feeding Balanced Diet leads to high omega 3 PUFAs in plasma and adipose tissue. (a) Plasma DHA and EPA are increased in Balanced Diet (BD) at all time points compared to Standard Rodent Chow (SRC) (*p < 0.05, **p < 0.001, t-test, FDR corrected, fall n = 9, torpor n = 7–8, IBA n = 4). Seasonal comparisons within the same diet found DHA was highest in torpor and IBA (post hoc Tukey, letters (a or b) within a given diet signify differences between phenotypic states within that diet). (b) WAT ALA, EPA and DHA are significantly increased in BD AGS compared to SRC AGS in all time points (*p < 0.05, **p < 0.001, t-test, FDR corrected, fall n = 11–12, torpor = 7–8, IBA = 4). (c) BAT ALA, EPA and DHA are significantly higher in BD AGS compared to SRC AGS in torpor and IBA (*p < 0.05, **p < 0.001, t-test, FDR corrected, torpor = 7–8, IBA = 4). Comparisons between torpor and IBA within the same diet found ALA decreased in IBA compared to torpor (t-test, FDR corrected, letters (a or b) within a given diet signify differences between phenotypic states within that diet). Fall BAT was not sampled. Data shown are mean ± SEM. Black dots are individual data points.

The Balanced Diet had a less consistent effect on plasma levels of omega 6 PUFAs than on levels of omega 3 PUFAs. In plasma, linoleic acid (LA), arachidonic acid (ARA) and docosapentaenoic acid (DPA ω6) did not differ between diets (Fig. 4a–c). In WAT and BAT, Balanced Diet decreased LA regardless of season or phenotypic state (Fig. 4d,g, p < 0.05, two-tailed t-test, FDR corrected). In WAT, ARA also decreased in Balanced Diet, but only during torpor (Fig. 4e, p < 0.05, two-tailed t-test, FDR corrected). This decrease in ARA occurred despite a tenfold higher amount of ARA in Balanced Diet chow compared to Standard Rodent Chow (Table 1b). BAT ARA and DPA ω6 did not differ between diets during hibernation (Fig. 4 h,i). By contrast, in WAT, Balanced Diet increased DPA ω6 during torpor (Fig. 4f, p < 0.05, two-tailed t-test, FDR corrected).

Figure 4

Balanced Diet does not influence omega 6 PUFAs in plasma, but diet influences LA in WAT and BAT. (a) Plasma LA, ARA and DPA w3 does not differ between Balanced Diet (BD) AGS in all time points compared to Standard Rodent Chow (SRC) AGS (t-test, FDR corrected, fall n = 9, torpor n = 7–8, IBA n = 4). Seasonal comparison within the same diet found plasma LA increases in torpor compared to fall BD AGS while DPA w6 decreases in torpor and IBA compared to fall in both diets (post hoc Tukey, letters (a or b) signify difference between season within the same diet group). (b) WAT LA is increased in SRC AGS compared to BD AGS in fall, torpor and IBA, while ARA is increased in torpid SRC animals and DPA w6 is increased in BD AGS in torpor (*p < 0.05, **p < 0.001, t-test, FDR corrected, fall n = 11–12, torpor = 7–8, IBA = 4). Seasonal comparison within the same diet found WAT LA decreases in torpor compared to fall BD AGS (post hoc Tukey, letters (a or b) signify difference between season within the same diet group) c. BAT LA is significantly higher in SRC AGS compared to BD AGS in torpor and IBA (*p < 0.05, **p < 0.001, t-test, FDR corrected, torpor = 7–8, IBA = 4). Data shown are mean ± SEM. Black dots are individual data points.

Balanced diet increased axillar brown adipose tissue deposits during hibernation

As omega 3 PUFAs have been shown to induce BAT adipogenesis15, we investigated if feeding omega 3 PUFAs increased BAT mass during the hibernation season. AGS fed the Balanced Diet had significantly more BAT mass than AGS fed the Standard Rodent Chow when measured in December during hibernation tissue collection (Fig. 5, p = 0.038, t-test).

Figure 5

Brown Adipose Tissue (BAT) mass is increased in Balanced Diet AGS (*p = 0.038, n = 11 Standard Rodent Chow, n = 12 Balanced Diet, t-test). BAT mass was sampled during the hibernation season in December. Data shown are mean ± SEM. Black dots are individual data points.

Long chain PUFAs are produced during natural interbout arousal from torpor

We next asked how the energetically demanding process of arousal from torpor affected lipid plasma profiles. For this study, where we only had access to AGS fed Standard Rodent Chow, we found that long chain PUFAs increased during early interbout arousal (IBA) (Fig. 6). Early interbout arousal is characterized by high metabolic rate and BAT thermogenesis41,42. Saturated, monounsaturated and polyunsaturated fatty acids all significantly increased during early arousal (when Tb is approximately 2.5 °C) (Fig. 6, p < 0.05, ANOVA, post hoc Tukey, n = 9). Downstream metabolites of the omega 6 and 3 cascade, such as DHA, EPA, dihomo-gamma-LA, DPA and ARA increased approximately 5–8-fold compared to late torpor and remained elevated as the animals’ core body temperature rose to 4 °C (Fig. 6). Further, specific interbout arousal periods were separated into distinct metabolic phenotypes based on lipid profile, distinct from full interbout arousal as well as from torpor (Supp. Fig. 1a, partial least-squares discriminate analysis). Pathway enrichment analysis additionally supports that PUFA chain elongation and desaturation was significant during interbout arousal (Supp Fig. 1b, p < 0.0001, n = 9).

Figure 6

Plasma metabolomic analysis during natural arousal from torpor shows spike of PUFA metabolites during early arousal. Plasma Fatty Acids and PUFAs increase significantly during early natural arousal from torpor. Data shown are relative abundance normalized to plasma sample collected at entrance into torpor at a Tb of 11–12 °C. The x-axis are phases of rewarming in natural arousal from torpor. (*p < 0.05, **p < 0.001 vs late torpor, post hoc Tukey, n = 9). Measurements are from individual animals sampled over a single, undisturbed natural arousal fed Standard Rodent Chow. Blood was sampled at specific core body temperatures (Tb) during arousal ranging from early arousal (2.5 °C) to full arousal (35 °C). Data shown as mean \(\pm\) SEM.

Balanced diet did not alter major hypothalamic endocannabinoids

The endocannabinoid system modulates metabolism, thermogenesis and circannual rhythms within the hypothalamus25,33; endocannabinoids and bioactive NAEs derive from PUFAs and fatty acids26,37. Given that previous studies have found dietary fats could sometimes alter brain NAE composition34,36, we next asked if an increase in omega 3 PUFAs through diet influenced hypothalamic endocannabinoid levels in hibernation. The majority of endocannabinoids and NAEs did not differ between the two diets in the hypothalamus during torpor, but some saturated NAEs did differ. During torpor 14:0 NAE (Supp. Table 1, p = 0.008, two-tailed t-test, FDR corrected) was significantly higher in Balanced Diet fed AGS compared to Standard Rodent Chow fed AGS while 22:0 NAE was higher in Standard Rodent Chow than Balanced Diet (Supp. Table 1, p = 0.008, two-tailed t-test, FDR corrected). Endocannabinoids 2-AG and AEA did not differ between the diets in torpor or IBA (Supp. Tables 1 and 2).

As a follow-up, we examined the influence of season and physiological state on hypothalamic endocannabinoids and NAEs. Summer Standard Rodent Chow hypothalamic samples were compared to torpor and IBA time points. AEA, OEA and synaptamide were higher in summer than in either hibernation state (Table 2, p < 0.05, one-way ANOVA, post hoc Tukey). PEA and 2-AG were increased in torpor compared to IBA (Table 2, p < 0.05, one-way ANOVA, post hoc Tukey).

Table 2 Seasonal changes in hypothalamic endocannabinoids and NAEs.


Feeding increased omega 3 PUFAs prior to hibernation, with a more balanced omega 6:3 ratio, positively modulates thermogenesis in torpor when animals fast and live off fat stores. This effect could be mediated by increasing BAT mass accumulation and increasing DHA and EPA levels in plasma, WAT and BAT. The altered diet did not influence hypothalamic endocannabinoids during the hibernation season, as initially hypothesized, but did alter some saturated hypothalamic NAEs during torpor. Omega 3 PUFAs are prominent in free-ranging hibernator diets11,39,40, and we show are liberated during the major thermogenic and energetically costly3 periods of hibernation (interbout arousal). Omega 3 PUFAs therefore may represent a dietary factor which could directly support critical thermogenic function during the hibernation season.

BAT adipogenesis, evidenced by the increase in axillary BAT mass in Balanced Diet AGS, may arise prior to or during hibernation. In non-hibernators omega 3 PUFAs enhance BAT adipogenesis via cAMP activation and upregulation of microRNAs15. Further, recent studies have found agonists of FFAR4, such as DHA, directly increase transcriptional programming for BAT adipogenesis in non-hibernating species15,43,44. As BAT is a major contributor of thermogenesis in hibernation we propose the higher levels of DHA in Balanced Diet AGS drives BAT adipogenesis resulting in the larger BAT deposits that likely contribute to the overall higher AGS Tb in torpor. As animals were kept at 2 °C, increased Tb in torpor requires an increase in metabolism.

One of the most striking characteristics of Balanced Diet AGS plasma are high levels of DHA and EPA compared to Standard Rodent Chow fed AGS in torpor. We propose circulating DHA and EPA may also stimulate thermogenesis in Balanced Diet animals. Although other FFAs can also directly stimulate uncoupling protein 1 (UCP1) in BAT, no difference in total plasma FFA, PUFA or MUFA was found between the diet groups indicating thermogenic mechanisms did not depend on changes in total concentration of FFA23. While multiple fatty acids have signaling properties, the fivefold increase in plasma DHA in torpor stands in contrast to the lack of difference in plasma omega 6 cascade metabolites (LA, ARA, DPA ω6) or total PUFAs levels between the two diets. This suggests either lipolysis and release of DHA and EPA into circulation during hibernation in the Balanced Diet AGS or increased production of DHA and EPA through altered enzymatic activity of elongation and desaturation for the omega 3 synthesis pathway in Balanced Diet AGS. Enhanced production of omega 3 long chain PUFAs is supported in other species as DHA in marmot cardiac and liver phospholipid membranes increases over the hibernation season40. Further, Arnold et al. (2011) hypothesized these omega 3 PUFAs may exert some thermogenic influence on timing of interbout arousal40.

DHA itself is also a powerful modulator of many signaling cascades45,46,47. Previous studies in non-hibernators have shown omega 3 PUFA intake (via DHA and EPA) increases mitochondrial respiration in BAT, stimulates the beiging of white adipose tissue (WAT) to thermogenically active tissue, and increases whole body thermogenesis13,15,16,17,43,48. Proposed mechanisms of action include stimulation of omega 3 PUFA receptor FFAR4 (GPR120) or modulation of thermosensing channel TRPV1 with downstream activation of fibroblast growth factor-21 (FGF21)13,15,44,49. FFAR4 is a G-protein coupled receptor highly expressed in fat tissues49. When bound by omega 3 PUFAs, FFAR4 activates a Ca2+ signaling cascade that sensitizes insulin signaling and inhibits inflammation49,50,51. PUFAs, such as LA and DHA, are also known to bind and activate other free fatty acid receptors such as FFA152. Former studies show treatment with mercaptoacetate, a deregulator of beta-oxidation and a known antagonist of FFA1 (GPR40)53, altered thermoregulation in hibernating ground squirrels54. Therefore, multiple fatty acid receptors could be targets of future investigations on signaling mechanisms for thermogenesis in hibernation.

A preference for the omega 3 synthesis pathway in hibernation, as well as active metabolism of omega 3 PUFAs, is indicated by seasonally high plasma DHA in both feed groups in torpor compared to fall levels. In contrast, ω6 DPA decreases and ARA remains unchanged in torpor compared to fall in both diets. As the major source of the omega 3 PUFA in Balanced Diet is ALA, the decrease in BAT ALA in IBA compared to torpor potentially indicates consumption of the omega 3 PUFA. Non-hibernator BAT cells, but not WAT, have been shown to produce DHA55.

A preference for PUFA metabolism also appears during interbout arousal from torpor. Our data shows plasma PUFA metabolites increase up to eightfold during natural early interbout arousal when the majority of thermogenesis is thought to be produced from BAT42,56. While lipolysis is part of the endogenous arousal process and many free fatty acids are released in early interbout arousal, the increase in DHA, EPA, and ARA are significantly higher than their parent compounds or MUFAs or SFAs and remain elevated into the second phase of early interbout arousal. Curiously, bats were found to oxidize PUFAs significantly more than SFAs in hibernation, potentially supporting a more dynamic use of PUFAs in hibernation than previously considered57. The sustained increase in long chain PUFAs, such as DHA, could further be explained by the fact ALA β-oxidation kinetics are known to be faster than other fatty acids in mitochondria58.

A question our study raises is if free-ranging hibernators actively use omega 3 PUFAs as thermogenic mediators during the winter. Arnold et al. (2011) documented systemic omega 3 PUFA loss from tissue stores in free-ranging marmots over a hibernation season barring an accumulation of DHA in cardiac and liver phospholipids40. Theoretically, DHA and EPA production during natural interbout arousal may constitute part of a signaling mechanism to enhance thermogenesis or BAT mass. Given free-ranging hibernators consume omega 3 PUFAs, omega 3 stimulated BAT accumulation could additionally be beneficial for cold challenged, free-ranging animals. In the wild, AGS encounter ambient temperatures that dip as low as − 19 °C2. To defend a Tb greater than − 3 °C, they increase metabolism and thermogenesis59,60. Cold challenge, known to increase metabolism, also activates FFAR4 in BAT, indicating a linked mechanism to omega 3 thermogenesis15,43,44,49,61. Greater deposition of BAT could be a defense mechanism against this natural environmental challenge42,62.

While we propose omega 3 PUFAs play a role in BAT accumulation and thermogenesis in hibernation, altered PUFA phospholipid membrane incorporation may also impact metabolism and thermoregulation63 Arnold et al. hypothesized phospholipid composition is specifically retained at a high omega 6:3 ratio for cardiac function at low temperature and to enhance sacro/endoplasmic reticulum Ca2+-ATPase (SERCA) function63,64,65. As we show in BAT, WAT and plasma, Balanced Diet lowered the omega 6:3 PUFA ratio by over half, suggesting a physiologically significant change we expect to be present in phospholipid membrane incorporation as well. Further work would need to discriminate the possible influence of Balanced Diet on phospholipid composition, free fatty acids in plasma and triglyceride composition.

Interestingly, our findings differed from some previous omega 3 hibernation studies7,11,12. One study found feeding higher ratios of omega 3 PUFAs than we employed caused marmots to maintain euthermic Tb and not hibernate throughout the entire hibernation season11. This suggests that there may be a concentration dependent influence of omega 3 PUFAs on hibernation. Further, two hibernation studies found no influence of omega 3 PUFAs on thermogenesis7,12, suggesting there may be species specific reactions to omega 3 PUFA feeding as well. Further, while increased Tb is often associated with shorter torpor bouts10, our increase in Tb did not translate to shorter torpor bout lengths. While this could suggest there may be more efficiency in energy expenditure in Balanced Diet AGS, further studies are required. An alternative explanation could be that the increase in Tb was not extensive enough to influence torpor bout length duration. Secondly, because tissues were collected mid-December, it is possible that an influence on torpor bout length would appear later in the hibernation season. Our results correspond with Frank et al. who found feeding higher levels of omega 3 PUFAs did not influence torpor bout length7.

Our results did not support our hypothesis that Balanced Diet would influence hypothalamic endocannabinoid and bioactive NAE levels, but data does show seasonal trends in endocannabinoids with some differences in saturated NAEs between diets. PEA (16:0 NAE), a bioactive fatty acid amide that is close in structure to AEA, and 2-AG, a full agonist of the CB1 receptor, increased in torpor in AGS compared to IBA, but did not differ from summer, potentially representing a circannual rhythm between the hibernation phases. As 2-AG is thought to modulate metabolism and induce hypothermia32, an intriguing question is whether increased 2-AG in torpor has any physiologic effect, such as reduction in body temperature. Additionally, the relationship between torpid and IBA 2-AG levels is somewhat similar to certain fasting experiments which saw increased 2-AG during severe fasting and reduction of 2-AG with feeding31. PEA on the other hand is not known to directly activate CB1 or CB2 receptors, but has been shown to desensitize TRPV1, activate PPARα and PPARγ as well as have strong anti-inflammatory and analgesic activity28. The seasonal increase in PEA may represent a protective mechanism given its anti-inflammatory and analgesic properties. While a recent study documented no significant change in hypothalamic endocannabinoids in marmots between summer and hibernation, they did see significant decreases in endocannabinoids in other tissues35. In conjunction with our findings, a lack of depression in multiple hypothalamic endocannabinoids and NAEs between both our studies (excluding the decreases in AEA, OAE and synaptamide) is intriguing in that most metabolic functions are profoundly downregulated in torpor. Given the unique position the endocannabinoid system holds in metabolism, satiation, thermogenesis, synaptic plasticity and 2-AG and PEA’s oscillation in hibernation, the physiologic role of endocannabinoids in hibernation beyond omega 3 dietary influence requires further study.

In conclusion, dietary omega 3 PUFAs, such as DHA and EPA, may play a beneficial role in increasing thermogenic capacity in hibernators. Increased BAT accumulation driven by dietary omega 3 PUFAs may represent a natural mechanism for AGS to increase BAT stores prior to and during hibernation.


Animal trapping

Juvenile AGS were lived-trapped during July on the northern side of the Brooks Range in Alaska, forty miles south of Toolik Field Station (64° 86′ N, 147° 84′ W). AGS were transported to the University of Alaska Fairbanks under IACUC approved protocols and Alaska Fish and Game permits.


Captive AGS were housed individually in 30 cm × 48.3 cm × 30 cm stainless steel wire mesh hanging cages with cotton nests. Cages were hung over ammonia absorbing corn cob litter. AGS were housed at ambient temperature (Ta, 16–18 °C) and 16L:8D hour light/dark cycle until August 15th, when they were moved to cold chambers with Ta of 2 °C at a 4L:20D hour light/dark cycle. In mid-July, animals were offered 47 g daily of either Standard Rodent Chow (#5663, Mazuri, PMI Nutrition International, Richmond, IN) or Balanced Diet (9GU5, formulated with Lab Diet, St. Louis, MO) and were provided water ad litbitum during the euthermic period (Table 1b). Once animals began hibernating, food was withdrawn. At this time animals were placed in polycarbonate cages (21.6 cm × 43.2 cm × 21.6 cm) with shavings, cotton bedding and gel hydration packets. The majority of AGS entered hibernation in September. Feed groups were evenly staggered on racks to ensure micro-climates in the cold chamber did not confound effects of diet on core body temperature (Tb). Care was taken to minimize all disturbances in the hibernation chamber during the hibernation season and access was restricted to research and veterinary staff per University of Alaska Fairbanks Institutional Animal Care and use Committee (IACUC) approved protocols.


Both diets were stored at − 4 °C. The contents of the Balanced diet (9GU5, formulated by Lab Diet, St. Louis, MO) provided by the manufacturer were 23.4% protein, 6.5% fat, 6% ash, 3.3% fiber. The contents of the Standard Rodent Chow (#5663, Mazuri, PMI Nutrition International, Richmond, IN) provided by the manufacturer were 23% protein, 6.5% fat, 4.5% fiber, 6.5% ash. Basic fatty acid composition, determined by GC as described below, of both diets is provided (Table 1b).


All procedures were performed and approved in accordance with University of Alaska Fairbanks Institutional Animal Care and use Committee and the Guide for Care and Use of Laboratory Animals (Eighth edition). Each dietary group had 6 juvenile males and 6 juvenile females. One animal died in the fall for reasons unrelated to diet. All animals remaining hibernated through the winter.


During the pre-hibernation feed period, waxed and sterilized I-button temperature loggers (DS1922L-F5 temperature accuracy from − 10 to + 65 °C, resolution ± 0.5 °C, Maxim Integrated, San Jose, CA) were implanted in the abdominal cavity using sterile technique as previously described66. Loggers were recovered after tissue collection in winter and temperature data were downloaded. I-button sampling rate was every 30 min throughout the hibernation season.

Blood and tissue collection

During the hibernation season, the “shavings added” method was employed to track torpor bout length66. On the first day of torpor when respirations were below 5 breaths per minute and the animal was inactive and showed a curled posture, shavings were placed onto the animals’ back. When animals arouse during IBA, shavings are disturbed. Using this method to identify when animals were hibernating, we monitored the length of torpor bouts. Animals were checked daily through the entire hibernation season. Torpor bout length and hibernation parameters were verified by I-button temperature data after euthanasia. Tissues were collected mid-December during three distinct physiological states of the hibernation torpor bout: Early torpor (defined as 10–25% of torpor bout length based on the average of the previous two torpor bouts, n = 7), late torpor (defined as 89–100% of torpor bout length based on the average of the previous two torpor bouts, n = 8) and IBA (core body temperature, (Tb) above 33 °C, n = 8). All torpid animals were euthanized between 9 and 11 am. Interbout arousal was induced by handling at 9 am, IBA tissues were collected at 1 pm.

To compare mass of BAT between animals we needed to collect all BAT tissue within the same seasonal time frame (mid-December). For this reason, we chose to induce arousal by brief, gentle, handling. Arousal induced by handling induces thermogenesis faster than natural arousal, but total thermogenesis is expected to be similar between handling-induced and natural arousal. For this reason, we do not think that handling animals to induce arousal confounds our interpretation of results.

Prior to tissue collection, euthermic animals were anesthetized with isoflurane (5% mixed with medical grade oxygen and delivered at 1.5 L/min) to achieve a surgical plane of anesthesia. Blood was sampled by cardiac puncture within 3 min after removing AGS from the home cage and a rectal thermometer was placed in the AGS. Animals (n = 23) were immediately decapitated after blood collection and tissues were dissected, wrapped in foil and placed immediately on dry ice. Brown adipose tissue (BAT) axillary deposits were easily dissected from surrounding tissue and weighed. Visceral white adipose tissue (WAT) was sampled from the abdominal cavity without difficulty. Fall plasma and visceral WAT were opportunistically sampled in August during surgery (approximately 3 weeks into the start of the feed trial), but BAT was not sampled in fall to reduce stress on the animals. Summer hypothalamus measurements for endocannabinoids came from a separate group of AGS fed Standard Rodent Chow Diet.

Hibernation physiology

Tb was monitored to assess the impact of diet on hibernation. AGS Tb in torpor was reported as the average Tb during torpor, defined as a Tb less than 4 °C after animals had their first two torpor bouts. AGS Tb in interbout arousal was reported as the average Tb after animals had their first two torpor bouts when animal’s Tb was over 34 °C. AGS torpor bout length was reported as hours from entrance to torpor to exit from torpor when animal’s Tb was below 5 °C. Torpor bouts last approximately 14–21 days after the first initial torpor bouts. Torpor is interrupted by interbout arousal periods (IBA) that last approximately 24 h (Fig. 2d).

Lipid fatty acid analysis

100 µl of plasma was thawed and decanted into a screw top test tube. 100 μg of free nonadecanoic acid (19:0) was added as an internal fatty acid standard (odd chain fatty acids are found in low abundance in non-rumen animals). Plasma lipids were then converted to fatty acid methyl esters with the addition of sulfuric acid in methanol and heated for 60 min at 100 °C67. Fatty acid methyl esters were extracted from sample tubes with the addition of water and distilled petroleum ether (mixed hexanes). The resulting non-polar ether phase was decanted and dried down under a gentle stream of nitrogen at ambient temperature.

Dried samples were immediately reconstituted with 100 µl of petroleum ether and decanted to a sample vial. Fatty acid methyl esters were then analyzed with a Shimadzu gas chromatograph (GC) model 2010. Samples were injected in split mode into a Restek (Bellefonte, PA) FAMEWAX 30 m column. The GC was programmed from 160 to 220 °C and detection conducted with flame ionization detection (FID). White adipose tissues were processed as described above with additional vortexing. For chow analysis, chow was homogenized with a standard coffee grinder into a fine particulate. The fatty acid and fat content of chow were determined as detailed above. Chromatograms and data were reviewed and calculated with Shimadzu Class VP software. Data are expressed as µg fatty acid per ml of plasma or mg of tissue (wet weight).

NAE and endocannabinoid hypothalamic analysis

Hypothalamus (5–10 mg excision) samples were subjected to Bligh and Dyer lipid extraction67 using Barocycler 2320EXT apparatus (Pressure Biosciences, Inc., Medford, MA), Teflon tubes with 0.15 ml with microcaps, and cycling pressure mode. Tubes were filled with 0.15 ml methanol/chloroform/0.9%KCl (2:1:0.5, v/v) and subjected to 30 pressure cycles of extraction (20 s at 35,000 psi then 20 s at 0 psi) at 4 °C. After pressure-assisted extraction, extracts were transferred into 8-ml glass screw-capped tubes with methanol, chloroform, and 0.9%KCl to produce a total of 2 mL methanol, 1 mL chloroform, and 0.5 mL 0.9%KCl. At this step, 20 pmol d5-2AG, 20 pmol d4-anandamide (both from Cayman Chemicals, Ann Arbor, MI) and 20 ng d4-NAE internal standard mix (made by transamination of a mixture of triglycerides and d4-ethanolamine (130 °C × 4 h) with subsequent d4-NAE precipitation from acetone and calibration by gas chromatography) were added. Extraction was finalized by the addition of 1 mL chloroform, 1.3 mL 0.9%KCl, vortexing and centrifugation (2000×g × 15 min). Chloroform phase was collected, evaporated by the stream of nitrogen, and re-dissolved in exactly 1 mL volume of methanol/chloroform (9:1, v/v). Extract aliquots (0.01 mL) were taken and total lipid phosphorus content was measured as described68. At the end, extracts were evaporated again, re-dissolved in 0.15 mL methanol and transferred into injection vials for NAE-2AG analysis by liquid chromatography electrospray ionization tandem mass spectrometry (LC–MS/MS).

LC–MS/MS of NAE and 2-AG was performed using AB Sciex 6500QTRAP mass spectrometer coupled with Shimadzu Nexera X2 UHPLC system. NAE and 2-AG were resolved on Ascentis Express RP-Amide 2.7 μm 2.1 × 50 mm column using gradient elution from methanol/water/formic acid (65:35:0.5, 5 mM ammonium formate) to methanol/chloroform/water/formic acid (90:10:0.5:0.5, 5 mM ammonium formate). NAEs were detected in a positive ions mode as a transition from corresponding molecular ions to m/z 62 (natural NAEs) or m/z 66 (d4-NAE); 2-AG was detected in positive ions mode as a transition from m/z 379 to m/z 287, and d5-2AG was detected as a transition from m/z 384 to m/z 287. Each analyte was detected based on principles previously described69,70 and quantified using isotope dilution approach and normalized per total sample lipid phosphorus content.

Undisturbed sampling of plasma during natural interbout arousal

Another set of AGS were instrumented with chronic femoral arterial and venous cannulas (3 Fr cannula, Instech Laboratories Inc, Plymouth Meeting, PA, USA) and either TA-F40 or CTA-F40 core body temperature (Tb) loggers implanted in the abdominal cavity (Data Sciences International, St. Paul, MN, USA, calibrated to 0, 35 and 39 °C, resolution ± 0.01 °C) in July and August as described previously41. Tb was recorded throughout the hibernation season at intervals of every 10 min. Cannulas were maintained with a heparin/glycerol locking solution (1:1). These animals were solely used for undisturbed sampling of plasma during natural IBA from torpor and were fed Standard Rodent Chow (n = 9). Blood was sampled during a torpor bout and through a natural IBA without disturbing AGS (female n = 5, male n = 4). Blood sampled at four time points of natural interbout arousal: Early arousal (Tb 2.5 °C), early arousal (Tb 4 °C), mid arousal (Tb 16 °C) and full arousal (Tb 35 °C). To delineate early lipolysis fueling interbout arousal we sampled two early arousal time points.

Ultrahigh-performance liquid chromatograph mass spectrometry (UHPLC-MS) analysis

Plasma samples (20 µL) were extracted using ice cold methanol:acetonitrile:water (5:3:2) at 1:25 dilution as previously described71. Extracts were analyzed on a Thermo Vanquish ultra-high performance liquid chromatograph (UHPLC) coupled online to a Thermo Q Exactive mass spectrometer using a 5 min C18 gradient method in positive and negative modes as described previously72,73. Peak picking and metabolite assignment were performed using Maven (Princeton University) against the KEGG database74,75,76, confirmed against chemical formula determination from isotopic patterns and accurate mass, and validated against experimental retention times for > 650 standard compounds (Sigma Aldrich; MLSMS, IROATech, Bolton, MA, USA)77.

Statistical analysis

Results were analyzed using SPSS statistical package (IBM, v. 25) and MetaboAnalyst 4.0. Data are shown as mean ± standard error of the means (SEM). Data were checked for normal distribution. Two-tailed t-test results that violated Levene’s test for equality of variances were reported with equal variances not assumed. T-tests were reported with false discovery rate (FDR) correction (p < 0.05) based on the Benjamini–Hochberg procedure. ANOVAs were reported with post hoc Tukey correction. Late torpor and early torpor samples were combined because fatty acid and endocannabinoid levels did not significantly differ between early and late torpor (t-test with FDR correction). Pathway enrichment analysis and PLS-DA were performed using MetaboAnalysist 4.078,79.

Data availability

The datasets generated during and/or analyzed during the current study are available from the corresponding author on reasonable request.



Balanced diet


Standard Rodent Chow


Arctic Ground Squirrel


Brown Adipose Tissue


White Adipose Tissue

Tb :

Core body temperature


Interbout arousal








Polyunsaturated fatty acid


Free fatty acid


Saturated fatty acid


Docosahexaenoic acid


Eicosapentaenoic acid


Arachidonic acid


Alpha linolenic acid


Linoleic acid


  1. 1.

    Carey, H. V., Andrews, M. T. & Martin, S. L. Mammalian hibernation: cellular and molecular responses to depressed metabolism and low temperature. Physiol. Rev. 83, 1153–1181. (2003).

    CAS  Article  PubMed  Google Scholar 

  2. 2.

    Barnes, B. M. Freeze avoidance in a mammal: body temperatures below 0 degree C in an Arctic hibernator. Science 244, 1593–1595 (1989).

    ADS  CAS  Article  Google Scholar 

  3. 3.

    Karpovich, S. A., Toien, O., Buck, C. L. & Barnes, B. M. Energetics of arousal episodes in hibernating arctic ground squirrels. J. Comp. Physiol. B 179, 691–700. (2009).

    Article  PubMed  Google Scholar 

  4. 4.

    Geiser, F. The effect of unsaturated and saturated dietary lipids on the pattern of daily torpor and the fatty acid composition of tissues and membranes of the deer mouse Peromyscus maniculatus. J. Comp. Physiol. B 161, 590–597 (1991).

    ADS  CAS  Article  Google Scholar 

  5. 5.

    Geiser, F. & Kenagy, G. J. Dietary fats and torpor patterns in hibernating ground squirrels. Can. J. Zool. 161, 590–597 (1993).

    Google Scholar 

  6. 6.

    Frank, C. L. Short-term variations in diet fatty acid composition and torpor by ground squirrels. J. Mammol. 83, 1013–1019 (2002).

    Article  Google Scholar 

  7. 7.

    Frank, C. L., Hood, W. R. & Donnelly, M. C. The role of alpha-Linolenic acid (18:3) in mammalian torpor. In Life in the Cold: Evolution, Mechanisms, Adaptation, and Application (eds Barnes, B. M. & Carey, H. V.) 71–80 (University of Alaska Fairbanks, Fairbanks, 2004).

    Google Scholar 

  8. 8.

    Frank, C. L., Karpovich, S. & Barnes, B. M. Dietary fatty acid composition and the hibernation patterns in free-ranging arctic ground squirrels. Physiol. Biochem. Zool. 81, 486–495. (2008).

    CAS  Article  PubMed  Google Scholar 

  9. 9.

    Florant, G. L., Hester, L., Ameenuddin, S. & Rintoul, D. A. The effect of a low essential fatty acid diet on hibernation in marmots. Am. J. Physiol. 264, R747-753. (1993).

    CAS  Article  PubMed  Google Scholar 

  10. 10.

    Geiser, F. & Kenagy, G. J. Polyunsaturated lipid diet lengthens torpor and reduces body temperature in a hibernator. Am. J. Physiol. 252, R897-901. (1987).

    CAS  Article  PubMed  Google Scholar 

  11. 11.

    Hill, V. L. & Florant, G. L. The effect of a linseed oil diet on hibernation in yellow-bellied marmots (Marmota flaviventris). Physiol. Behav. 68, 431–437 (2000).

    CAS  Article  Google Scholar 

  12. 12.

    Giroud, S. et al. Dietary lipids affect the onset of hibernation in the garden dormouse (Eliomys quercinus): implications for cardiac function. Front. Physiol. 9, 1235. (2018).

    Article  PubMed  PubMed Central  Google Scholar 

  13. 13.

    Kim, M. et al. Fish oil intake induces UCP1 upregulation in brown and white adipose tissue via the sympathetic nervous system. Sci. Rep. 5, 18013. (2015).

    ADS  CAS  Article  PubMed  PubMed Central  Google Scholar 

  14. 14.

    Bargut, T. C., Silva-e-Silva, A. C., Souza-Mello, V., Mandarim-de-Lacerda, C. A. & Aguila, M. B. Mice fed fish oil diet and upregulation of brown adipose tissue thermogenic markers. Eur. J. Nutr. 55, 159–169. (2016).

    CAS  Article  PubMed  Google Scholar 

  15. 15.

    Kim, J. et al. Eicosapentaenoic acid potentiates brown thermogenesis through FFAR4-dependent up-regulation of miR-30b and miR-378. J. Biol. Chem. 291, 20551–20562. (2016).

    CAS  Article  PubMed  PubMed Central  Google Scholar 

  16. 16.

    Lund, J., Larsen, L. H. & Lauritzen, L. Fish oil as a potential activator of brown and beige fat thermogenesis. Adipocyte 7, 88–95. (2018).

    Article  PubMed  PubMed Central  Google Scholar 

  17. 17.

    Oudart, H. et al. Brown fat thermogenesis in rats fed high-fat diets enriched with n-3 polyunsaturated fatty acids. Int. J. Obes. Relat. Metab. Disord. 21, 955–962. (1997).

    CAS  Article  PubMed  Google Scholar 

  18. 18.

    Florant, G. L. & Heller, H. C. CNS regulation of body temperature in euthermic and hibernating marmots (Marmota flaviventris). Am. J. Physiol. 232, R203-208. (1977).

    CAS  Article  PubMed  Google Scholar 

  19. 19.

    Heller, H. C. & Colliver, G. W. CNS regulation of body temperature during hibernation. Am. J. Physiol. 227, 583–589. (1974).

    CAS  Article  PubMed  Google Scholar 

  20. 20.

    Drew, K. L. et al. Central nervous system regulation of mammalian hibernation: implications for metabolic suppression and ischemia tolerance. J. Neurochem. 102, 1713–1726. (2007).

    CAS  Article  PubMed  PubMed Central  Google Scholar 

  21. 21.

    Drew, K. L., Frare, C. & Rice, S. A. Neural signaling metabolites may modulate energy use in hibernation. Neurochem. Res. 42, 141–150. (2017).

    CAS  Article  PubMed  Google Scholar 

  22. 22.

    Morrison, S. F., Madden, C. J. & Tupone, D. Central neural regulation of brown adipose tissue thermogenesis and energy expenditure. Cell Metab. 19, 741–756. (2014).

    CAS  Article  PubMed  PubMed Central  Google Scholar 

  23. 23.

    Braun, K., Oeckl, J., Westermeier, J., Li, Y. & Klingenspor, M. Non-adrenergic control of lipolysis and thermogenesis in adipose tissues. J. Exp. Biol. 221, 163541. (2018).

    Article  Google Scholar 

  24. 24.

    Frare, C., Jenkins, M. E., Soldin, S. J. & Drew, K. L. The raphe pallidus and the hypothalamic-pituitary-thyroid axis gate seasonal changes in thermoregulation in the hibernating Arctic Ground Squirrel (Urocitellus parryii). Front. Physiol. 9, 1747. (2018).

    Article  PubMed  PubMed Central  Google Scholar 

  25. 25.

    Fitton, A. G. & Pertwee, R. G. Changes in body temperature and oxygen consumption rate of conscious mice produced by intrahypothalamic and intracerebroventricular injections of delta 9-tetrahydrocannabinol. Br. J. Pharmacol. 75, 409–414. (1982).

    CAS  Article  PubMed  PubMed Central  Google Scholar 

  26. 26.

    Berdyshev, E. V. et al. Cannabinoid-receptor-independent cell signalling by N-acylethanolamines. Biochem. J. 360, 67–75. (2001).

    CAS  Article  PubMed  PubMed Central  Google Scholar 

  27. 27.

    Berdyshev, E. V. Cannabinoid receptors and the regulation of immune response. Chem. Phys. Lipids. 108, 169–190. (2000).

    CAS  Article  PubMed  Google Scholar 

  28. 28.

    Ambrosino, P., Soldovieri, M. V., Russo, C. & Taglialatela, M. Activation and desensitization of TRPV1 channels in sensory neurons by the PPARalpha agonist palmitoylethanolamide. Br. J. Pharmacol. 168, 1430–1444. (2013).

    CAS  Article  PubMed  PubMed Central  Google Scholar 

  29. 29.

    Cedernaes, J. et al. Sleep restriction alters plasma endocannabinoids concentrations before but not after exercise in humans. Psychoneuroendocrinology 74, 258–268. (2016).

    CAS  Article  PubMed  Google Scholar 

  30. 30.

    Fraga, D., Zanoni, C. I., Rae, G. A., Parada, C. A. & Souza, G. E. Endogenous cannabinoids induce fever through the activation of CB1 receptors. Br. J. Pharmacol. 157, 1494–1501. (2009).

    CAS  Article  PubMed  PubMed Central  Google Scholar 

  31. 31.

    Kirkham, T. C., Williams, C. M., Fezza, F. & Di Marzo, V. Endocannabinoid levels in rat limbic forebrain and hypothalamus in relation to fasting, feeding and satiation: stimulation of eating by 2-arachidonoyl glycerol. Br. J. Pharmacol. 136, 550–557. (2002).

    CAS  Article  PubMed  PubMed Central  Google Scholar 

  32. 32.

    Long, J. Z. et al. Selective blockade of 2-arachidonoylglycerol hydrolysis produces cannabinoid behavioral effects. Nat. Chem. Biol. 5, 37–44. (2009).

    CAS  Article  PubMed  Google Scholar 

  33. 33.

    Pertwee, R. G. Pharmacological actions of cannabinoids. Handb. Exp. Pharmacol. 1, 1–51. (2005).

    Article  Google Scholar 

  34. 34.

    Naughton, S. S., Mathai, M. L., Hryciw, D. H. & McAinch, A. J. Fatty acid modulation of the endocannabinoid system and the effect on food intake and metabolism. Int. J. Endocrinol. 2013, 361895. (2013).

    CAS  Article  PubMed  PubMed Central  Google Scholar 

  35. 35.

    Mulawa, E. A. et al. Seasonal changes in endocannabinoid concentrations between active and hibernating marmots (Marmota flaviventris). J. Biol. Rhythms 33, 388–401. (2018).

    CAS  Article  PubMed  Google Scholar 

  36. 36.

    Berger, A., Mutch, D. M., German, J. B. & Roberts, M. A. Dietary effects of arachidonate-rich fungal oil and fish oil on murine hepatic and hippocampal gene expression. Lipids Health Dis. 1, 2. (2002).

    Article  PubMed  PubMed Central  Google Scholar 

  37. 37.

    Wang, J. & Ueda, N. Biology of endocannabinoid synthesis system. Prostaglandins Other Lipid Mediat. 89, 112–119. (2009).

    CAS  Article  PubMed  Google Scholar 

  38. 38.

    Artmann, A. et al. Influence of dietary fatty acids on endocannabinoid and N-acylethanolamine levels in rat brain, liver and small intestine. Biochim. Biophys. Acta 1781, 200–212. (2008).

    CAS  Article  PubMed  Google Scholar 

  39. 39.

    Florant, G. L., Nuttle, L. C., Mullinex, D. E. & Rintoul, D. A. Plasma and white adipose tissue lipid composition in marmots. Am. J. Physiol. 258, R1123-1131. (1990).

    CAS  Article  PubMed  Google Scholar 

  40. 40.

    Arnold, W., Ruf, T., Frey-Roos, F. & Bruns, U. Diet-independent remodeling of cellular membranes precedes seasonally changing body temperature in a hibernator. PLoS ONE 6, e18641. (2011).

    ADS  CAS  Article  PubMed  PubMed Central  Google Scholar 

  41. 41.

    Toien, O., Drew, K. L., Chao, M. L. & Rice, M. E. Ascorbate dynamics and oxygen consumption during arousal from hibernation in Arctic ground squirrels. Am. J. Physiol. Regul. Integr. Comp. Physiol. 281, R572-583. (2001).

    CAS  Article  PubMed  Google Scholar 

  42. 42.

    Horwitz, B. A., Smith, R. E. & Pengelley, E. T. Estimated heat contribution of brown fat in arousing ground squirrels (Citellus lateralis). Am. J. Physiol. 214, 115–121. (1968).

    CAS  Article  PubMed  Google Scholar 

  43. 43.

    Pahlavani, M. et al. Eicosapentaenoic acid regulates brown adipose tissue metabolism in high-fat-fed mice and in clonal brown adipocytes. J. Nutr. Biochem. 39, 101–109. (2017).

    CAS  Article  PubMed  Google Scholar 

  44. 44.

    Quesada-Lopez, T. et al. The lipid sensor GPR120 promotes brown fat activation and FGF21 release from adipocytes. Nat. Commun. 7, 13479. (2016).

    ADS  Article  PubMed  PubMed Central  Google Scholar 

  45. 45.

    Akbar, M., Calderon, F., Wen, Z. & Kim, H. Y. Docosahexaenoic acid: a positive modulator of Akt signaling in neuronal survival. Proc. Natl. Acad. Sci. USA 102, 10858–10863. (2005).

    ADS  CAS  Article  PubMed  Google Scholar 

  46. 46.

    Guo, M., Stockert, L., Akbar, M. & Kim, H. Y. Neuronal specific increase of phosphatidylserine by docosahexaenoic acid. J. Mol. Neurosci. 33, 67–73. (2007).

    CAS  Article  PubMed  Google Scholar 

  47. 47.

    Salem, N. Jr., Litman, B., Kim, H. Y. & Gawrisch, K. Mechanisms of action of docosahexaenoic acid in the nervous system. Lipids 36, 945–959. (2001).

    CAS  Article  PubMed  Google Scholar 

  48. 48.

    Ghandour, R. A. et al. Impact of dietary omega3 polyunsaturated fatty acid supplementation on brown and brite adipocyte function. J. Lipid. Res. 59, 452–461. (2018).

    CAS  Article  PubMed  PubMed Central  Google Scholar 

  49. 49.

    Fan, R., Koehler, K. & Chung, S. Adaptive thermogenesis by dietary n-3 polyunsaturated fatty acids: emerging evidence and mechanisms. Biochim. Biophys. Acta Mol. Cell. Biol. Lipids 59–70, 2019. (1864).

    CAS  Article  Google Scholar 

  50. 50.

    Shao, C. et al. Shotgun proteomics analysis of hibernating arctic ground squirrels. Mol. Cell Proteomics 9, 313–326. (2010).

    CAS  Article  PubMed  Google Scholar 

  51. 51.

    Song, T., Yang, Y., Zhou, Y., Wei, H. & Peng, J. GPR120: a critical role in adipogenesis, inflammation, and energy metabolism in adipose tissue. Cell. Mol. Life Sci. 74, 2723–2733. (2017).

    CAS  Article  PubMed  Google Scholar 

  52. 52.

    Itoh, Y. et al. Free fatty acids regulate insulin secretion from pancreatic beta cells through GPR40. Nature 422, 173–176. (2003).

    ADS  CAS  Article  PubMed  Google Scholar 

  53. 53.

    Darling, R. A. et al. Mercaptoacetate and fatty acids exert direct and antagonistic effects on nodose neurons via GPR40 fatty acid receptors. Am. J. Physiol. Regul. Integr. Comp. Physiol. 307, R35-43. (2014).

    CAS  Article  PubMed  PubMed Central  Google Scholar 

  54. 54.

    Dark, J. & Miller, D. R. Metabolic fuel privation in hibernating and awake ground squirrels. Physiol. Behav. 63, 59–65. (1997).

    CAS  Article  PubMed  Google Scholar 

  55. 55.

    Qin, X. et al. Brown but not white adipose cells synthesize omega-3 docosahexaenoic acid in culture. Prostaglandins Leukot. Essent. Fatty Acids 104, 19–24. (2016).

    CAS  Article  PubMed  Google Scholar 

  56. 56.

    Kitao, N. & Hashimoto, M. Increased thermogenic capacity of brown adipose tissue under low temperature and its contribution to arousal from hibernation in Syrian hamsters. Am. J. Physiol. Regul. Integr. Comp. Physiol. 302, R118-125. (2012).

    CAS  Article  PubMed  Google Scholar 

  57. 57.

    Rosner, E. & Voigt, C. C. Oxidation of linoleic and palmitic acid in pre-hibernating and hibernating common noctule bats revealed by (13)C breath testing. J. Exp. Biol. 221, 168096. (2018).

    Article  Google Scholar 

  58. 58.

    Gavino, V. C., Cordeau, S. & Gavino, G. Kinetic analysis of the selectivity of acylcarnitine synthesis in rat mitochondria. Lipids 38, 485–490. (2003).

    CAS  Article  PubMed  Google Scholar 

  59. 59.

    Buck, C. L. & Barnes, B. M. Effects of ambient temperature on metabolic rate, respiratory quotient, and torpor in an arctic hibernator. Am. J. Physiol. Regul. Integr. Comp. Physiol. 279, R255-262. (2000).

    CAS  Article  PubMed  Google Scholar 

  60. 60.

    Richter, M. M. et al. Thermogenic capacity at subzero temperatures: how low can a hibernator go?. Physiol. Biochem. Zool. 88, 81–89. (2015).

    CAS  Article  PubMed  Google Scholar 

  61. 61.

    Rosell, M. et al. Brown and white adipose tissues: intrinsic differences in gene expression and response to cold exposure in mice. Am. J. Physiol. Endocrinol. Metab. 306, E945-964. (2014).

    CAS  Article  PubMed  PubMed Central  Google Scholar 

  62. 62.

    Milner, R. E., Wang, L. C. & Trayhurn, P. Brown fat thermogenesis during hibernation and arousal in Richardson’s ground squirrel. Am. J. Physiol. 256, R42-48. (1989).

    CAS  Article  PubMed  Google Scholar 

  63. 63.

    Arnold, W., Giroud, S., Valencak, T. G. & Ruf, T. Ecophysiology of omega Fatty acids: a lid for every jar. Physiology 30, 232–240. (2015).

    CAS  Article  PubMed  Google Scholar 

  64. 64.

    Giroud, S. et al. Membrane phospholipid fatty acid composition regulates cardiac SERCA activity in a hibernator, the Syrian hamster (Mesocricetus auratus). PLoS ONE 8, e63111. (2013).

    ADS  CAS  Article  PubMed  PubMed Central  Google Scholar 

  65. 65.

    Ruf, T. & Arnold, W. Effects of polyunsaturated fatty acids on hibernation and torpor: a review and hypothesis. Am. J. Physiol. Regul. Integr. Comp. Physiol. 294, R1044-1052. (2008).

    CAS  Article  PubMed  Google Scholar 

  66. 66.

    Frare, C., Jenkins, M. E., McClure, K. M. & Drew, K. L. Seasonal decrease in thermogenesis and increase in vasoconstriction explain seasonal response to N(6) -cyclohexyladenosine-induced hibernation in the Arctic ground squirrel (Urocitellus parryii). J. Neurochem. 151, 316–335. (2019).

    CAS  Article  PubMed  PubMed Central  Google Scholar 

  67. 67.

    Bligh, E. G. & Dyer, W. J. A rapid method of total lipid extraction and purification. Can. J. Biochem. Physiol. 37, 911–917. (1959).

    CAS  Article  PubMed  PubMed Central  Google Scholar 

  68. 68.

    Vaskovsky, V. E., Kostetsky, E. Y. & Vasendin, I. M. A universal reagent for phospholipid analysis. J. Chromatogr. 114, 129–141. (1975).

    CAS  Article  PubMed  Google Scholar 

  69. 69.

    Zoerner, A. A. et al. Quantification of endocannabinoids in biological systems by chromatography and mass spectrometry: a comprehensive review from an analytical and biological perspective. Biochim. Biophys. Acta 706–723, 2011. (1811).

    CAS  Article  Google Scholar 

  70. 70.

    Dumlao, D. S., Buczynski, M. W., Norris, P. C., Harkewicz, R. & Dennis, E. A. High-throughput lipidomic analysis of fatty acid derived eicosanoids and N-acylethanolamines. Biochim. Biophys. Acta 724–736, 2011. (1811).

    CAS  Article  Google Scholar 

  71. 71.

    Moore, H. B. et al. The metabolic time line of pancreatic cancer: opportunities to improve early detection of adenocarcinoma. Am. J. Surg. 218, 1206–1212. (2019).

    Article  PubMed  Google Scholar 

  72. 72.

    Gehrke, S. et al. Red blood cell metabolic responses to torpor and arousal in the hibernator arctic ground squirrel. J. Proteome Res. (2019).

    Article  PubMed  PubMed Central  Google Scholar 

  73. 73.

    Nemkov, T., Reisz, J. A., Gehrke, S., Hansen, K. C. & D’Alessandro, A. High-throughput metabolomics: isocratic and gradient mass spectrometry-based methods. Methods Mol. Biol. 13–26, 2019. (1978).

    CAS  Article  Google Scholar 

  74. 74.

    Kanehisa, M. & Goto, S. KEGG: kyoto encyclopedia of genes and genomes. Nucleic Acids Res. 28, 27–30. (2000).

    CAS  Article  PubMed  PubMed Central  Google Scholar 

  75. 75.

    Kanehisa, M. The KEGG database. Novartis Found. Symp. 247, 91–101 (2002) (Discussion 101–103, 119–128, 244–152).

    CAS  Article  Google Scholar 

  76. 76.

    Kanehisa, M., Sato, Y., Furumichi, M., Morishima, K. & Tanabe, M. New approach for understanding genome variations in KEGG. Nucleic Acids Res. 47, D590–D595. (2019).

    CAS  Article  PubMed  Google Scholar 

  77. 77.

    Nemkov, T., Hansen, K. C. & D’Alessandro, A. A three-minute method for high-throughput quantitative metabolomics and quantitative tracing experiments of central carbon and nitrogen pathways. Rapid Commun. Mass Spectrom. 31, 663–673. (2017).

    ADS  CAS  Article  PubMed  PubMed Central  Google Scholar 

  78. 78.

    Chong, J., Wishart, D. S. & Xia, J. Using MetaboAnalyst 4.0 for comprehensive and integrative metabolomics data analysis. Curr. Protoc. Bioinform. 68, e86. (2019).

    Article  Google Scholar 

  79. 79.

    Xia, J. & Wishart, D. S. Web-based inference of biological patterns, functions and pathways from metabolomic data using MetaboAnalyst. Nat. Protoc. 6, 743–760. (2011).

    CAS  Article  PubMed  Google Scholar 

Download references


We thank Chris Terzi and Carla Willetto for their veterinary assistance, Carla Frare for reviewing this manuscript and Hoshi Sugiura and Melanie Roed for assistance with animal husbandry. We also thank Pressure Biosciences, Inc. for a generous loan of Barocycler 2320EXT instrument to EB.


Research reported in this publication was supported by an Institutional Development Award (IDeA) from the National Institute of General Medical Sciences of the National Institutes of Health under grant numbers 2P20GM103395 and P20GM130443 and NSF IOS 1258179. BLaST is supported by the NIH Common Fund, through the Office of Strategic Coordination, Office of the NIH Director with the linked awards: TL4GM118992, RL5GM118990, & UL1GM118991. The content is solely the responsibility of the authors and does not necessarily represent the official views of the National Institutes of Health.

Author information




S.R., M.M. and K.D. conceived and designed the experiments. S.R. and M.M. performed the experiments. S.R., M.M., E.B., I.B., A.D., S.G., J.R. and D.B. analyzed samples and data. S.R. wrote the manuscript with input from all authors.

Corresponding author

Correspondence to K. L. Drew.

Ethics declarations

Competing interests

SR, MM, EB, IB, AD, SG, JR declare no conflict of interest. KLD has a financial interest in Be Cool Pharmaceutics and DB has a financial interest in Lipid Technologies, LLC.

Additional information

Publisher's note

Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.

Supplementary Information

Rights and permissions

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit

Reprints and Permissions

About this article

Verify currency and authenticity via CrossMark

Cite this article

Rice, S.A., Mikes, M., Bibus, D. et al. Omega 3 fatty acids stimulate thermogenesis during torpor in the Arctic Ground Squirrel. Sci Rep 11, 1340 (2021).

Download citation


By submitting a comment you agree to abide by our Terms and Community Guidelines. If you find something abusive or that does not comply with our terms or guidelines please flag it as inappropriate.


Quick links

Nature Briefing

Sign up for the Nature Briefing newsletter — what matters in science, free to your inbox daily.

Get the most important science stories of the day, free in your inbox. Sign up for Nature Briefing