Article | Open | Published:

# Effect of Time-Delayed Feedback on the Interaction of a Dimer System with its Environment

Scientific Reportsvolume 7, Article number: 15468 (2017) | Download Citation

## Abstract

In this work, we report modeling of non-Markovian open quantum systems, consisting of an excitonic dimer that displays memory effect due to time delayed interaction with its environment. We, indeed investigate the effect of these time delays on quantum coherence and excitation dynamical behavior in the time domain generally considered for photosynthetic experiments (few hundred femtoseconds). In particular, we show that the coherence is maintained for periods proportional to time delays. Additionally, if delay is taken into account, coupling to the environment can be tuned to lower values, unlike in previous studies. This kind of intriguing effect can, therefore, when generalized to complete systems, permit more control on the experimental parameters, which may lead to more accurate description of the photosynthetic energy transfer functioning and subsequent applications in artificial photovoltaic research.

## Introduction

Photosynthesis is the main mechanism by which solar energy is converted into chemical and biological energy on earth. The captured sunlight (electronic excitation) is transferred from the antenna system to the reaction center, by transporting the electronic excitation that can be used for the charge separation initiating a bunch of biochemical processes1. This light harvesting and exciton transport by the photosynthetic protein complexes occurs with a surprisingly high efficiency. It is believed that this is quantum mechanical effect and should be accordingly explained by models based on quantum theory2,3,4,5,6,7,8,9,10,11. In fact, some of the states of molecular vibration of the chromophores facilitate the transfer of energy during the process of photosynthesis and contribute to its effectiveness11. Thus, for example, when two chromophores vibrate, it happens that certain energies associated with these collective vibrations of the two molecules are such that they correspond to transitions between two levels of electronic energy of the molecules. A resonance phenomenon occurs and a transfer of energy flows between the two chromophores8.

Several studies have reported the quantum coherence effect in excitonic transport in Fenna-Matthews-Olson (FMO) complexes. This was even experimentally proved in the seminal study of Engel and Scholes in 20072 using 2D Fourier transform electronic spectroscopy12,13. Generally, the community concentrated on studying these effects on the FMO complex, that consists of Bacteriochlorophyll (BChl) pigments bound to a protein scaffold14. FMO is generally found in green sulfur bacteria and is a simple system that can be adequately described theoretically and numerically. This complex is a trimer, where each monomer consists of eight BChl molecules, where the 8th BChl is though weakly bound15. The interest fueled among the community on FMO is justified by its well-documented structure, as well as its solubility in water, facilitating thus experimental uses16.

Soon after, several theoretical studies have been proposed in order to explain these somewhat counter-intuitive and unexpected features, i.e. highly efficient energy transfer at physiological temperatures. In fact, one would expect that a very fast decoherence due to strong interaction between the system and bath of oscillators occurs, and therefore leads to energy and phase relaxation, thus allowing for downhill directed transfer of energy17,18. However, experimental works (seminal work of Engel2) showed that decoherence times in FMO very much exceeded expected values calculated using traditional line-widths of electronic transitions19. This evidence means that the coupling to the vibrational bath must be more important than anticipated, in particular the vibrational modes with frequencies near the electronic frequency gaps between the BChl sites (to accurately model the energy transfer dynamics in the FMO complex). To this purpose, many theoretical studies used different methods to study the excitonic dynamics, e.g. hierarchy equation of motion20,21,22, multi-configuration TD Hartree17, Redfield modified equations23,24,25, path integral approach26.

Unlike Markovian quantum systems, where deriving memory-less equations of motion is a feasible task27,28,29, the study of open quantum systems with random memory (or quantum feedback) effect is more elusive, because of the absence of systematic tools independent of the system-environment specific interaction30,31. In this context, Carmichael, Gardiner, and Sokolov, independently developed the theory of cascaded quantum open systems32,33,34 where typically the output from one system is fed into another one. Conversely, coherent quantum feedback is completely different in the sense that it is not mediated by a sensor or measurement whose results are supplied to the quantum system, but rather it is a consequence of the dynamics of the system-bath coupling35. In this context Grimsmo et al. have proposed a control scheme designed to reduce the time a damped, driven system takes to reach a steady state36,37.

In this report, we utilize the modeling where delay is introduced to quantum open systems (bosonic and fermionic, alike) as in ref.38 and we propose to study a general example of a dimer, i.e. a two-level system basically (that can be used as a benchmark for describing a system of two specific BChl, as was done for example in refs39,40,41). and the population beating due to feedback in the interaction with a bath of phonons. We believe that such memory effect (non-Markovianity) can have a role in the excitonic dynamics of more complex FMO systems and that this simple model shows that taking into account this effect, one is able to reduce the coupling to vibrations (in coherence with the expected line-widths). We believe also that a more complete treatment taking into account this feedback can help in shedding new light towards the understanding of efficient energy transfer in photosynthetic organisms and to be able to propose artificial devices based on this concept10,42,43.

The outline of this manuscript is the following, in the first section we derive the theoretical model describing delay in the interaction between a two-level system and its environment (bath of phonons). In next section, we use this simplified model of dimer to study the dynamics of the populations. We finally, investigate the role of the delay $$\tau$$ in the beating effect and show how this can help in reducing the high coupling to environment.

## Theoretical modeling

Frenkel exciton Hamiltonian is generally used to describe excitonic dynamics, that consists of N sites, each having the excitation energy $$\hslash {{\rm{\Omega }}}_{n}$$. This system is embedded in a reservoir (bath) of phonons (collection of harmonic oscillators) of energies $$\hslash {\omega }_{m,\xi }$$ (where each site is assumed to be associated to its own bath).

### System Hamiltonian and approximations

The Hamiltonian that describes the complete dynamics of Frenkel excitons is given in the form11

$$H={H}_{S}+{H}_{SE}+{H}_{E},$$
(1)

where $$HS=\sum _{n,n^{\prime} }\,(\hslash {{\rm{\Omega }}}_{n}{\delta }_{n,n^{\prime} }+{V}_{n,n^{\prime} }(t)){a}_{n}^{\dagger }{a}_{n^{\prime} }$$, $${H}_{E}=\sum _{m,\xi }\hslash {\omega }_{m,\xi }{b}_{m,\xi }^{\dagger }{b}_{m,\xi }$$, and $${H}_{SE}$$ denote the system, the environment, and the interaction Hamiltonian, respectively. Equation (1) can be re-cast in the more convenient form

$$H={H}_{0}+{H}_{A}+{H}_{SE},$$
(2)

where we have defined

$${H}_{0}=\sum _{n}\hslash {{\rm{\Omega }}}_{n}{a}_{n}^{\dagger }{a}_{n}+\sum _{m}\sum _{\xi }\hslash {\omega }_{m,\xi }{b}_{m,\xi }^{\dagger }{b}_{m,\xi },$$
(3)

where $${a}_{n}$$ $$({a}_{n}^{\dagger })$$ and $${b}_{m,\xi }$$ $$({b}_{m,\xi }^{\dagger })$$ denote annihilation (creation) operators of an excitation of the system and reservoir, respectively. The time-dependent Hamiltonian $${H}_{A}(t)$$ represents the coupling between the neighboring sites, i.e. the detuning from the central frequencies $${{\rm{\Omega }}}_{n}$$

$${H}_{A}(t)=\sum _{n,n^{\prime} }\,{V}_{n,n^{\prime} }(t){a}_{n}^{\dagger }{a}_{n^{\prime} }.$$
(4)

The system-environment (sites-bath) interact via the Hamiltonian4

$${H}_{SE}=\sum _{n}\sum _{m,\xi }({\kappa }_{n,m,\xi }{\sigma }^{+}{b}_{m,\xi }+{\kappa }_{n,m,\xi }^{\ast }{\sigma }^{-}{b}_{m,\xi }^{\dagger }),$$
(5)

where each site is supposed to to be coupled to an independent bath of harmonic oscillators. $${\sigma }^{+}$$ and $${\sigma }^{-}$$ are the pseudo-spin operators of a two-level system and are related to the electronic operators as $${\sigma }^{+,-}={a}_{1,2}^{\dagger }{a}_{2,1}$$. The constants $${\kappa }_{n,m,\xi }$$ denote the coupling strength between electronic excitation n and m bosonic bath modes of momenta $$\xi$$. The coupling is assumed to be linear in the coordinates of the harmonic oscillator. Additionally, the total excitation is conserved.

The initial state of the total system (sites-bath) is given in terms of the decoupled density matrix29

$$\rho (0)={\rho }_{S}\otimes {\rho }_{E}={p}_{0}|0\rangle \langle 0|+(1-{p}_{0})|\psi (0)\rangle \langle \psi (0)|.$$
(6)

At time t and due to excitation number conservation, the sate $$\psi (t)$$ can be expanded as29

$$\psi (t)={c}_{0}|0\rangle +\sum _{n}{c}_{n}(t){a}_{n}^{\dagger }|0\rangle +\sum _{m,\xi }{d}_{m,\xi }(t){b}_{m,\xi }^{\dagger }|0\rangle .$$
(7)

Substituting Eq. (7) in the Schrödinger equation, one can get the differential equation for the amplitudes of the system29

$$\frac{d}{dt}{c}_{j}(t)=-i\sum _{l}{{\rm{\Delta }}}_{j,l}(t){c}_{l}(t)-\sum _{l}{\int }_{0}^{t}dt^{\prime} {F}_{j,l}(t,t^{\prime} ){c}_{l}(t^{\prime} ),$$
(8)

with $${{\rm{\Delta }}}_{j,l}(t)=\langle 0|{a}_{j}{H}_{A}(t){a}_{l}^{\dagger }|0\rangle$$ and

$${F}_{j,l}(t,t^{\prime} )={e}^{i({{\rm{\Omega }}}_{j}t-{{\rm{\Omega }}}_{l}t^{\prime} )}\sum _{m}{\int }_{-{\rm{\infty }}}^{{\rm{\infty }}}d\omega {J}_{m,j,l}(\omega ){e}^{-i\omega (t-t^{\prime} )},$$
(9)

where we have defined the spectral densities, in their most general form $${J}_{m,j,l}(\omega )={\sum }_{\xi }{\kappa }_{j,m,\xi }{\kappa }_{l,m,\xi }^{\ast }\delta (\omega -{\omega }_{m,\xi })$$.

### System and discrete delay

In particular, we consider in this study a simplified system, i.e. a system consisting of two sites. Each of these sites can be approximated by a two-level system (as depicted in Fig. 1(a))39. And since the intensity of incident light excitation is generally weak, one can further approximate these two sub-systems by an effective other two-level system (see Fig. 1(a))41 coupled to a bosonic environment at two spatial different locations (as schematically depicted in Fig. 1(b)), forming a coherent feedback loop with time delay $$\tau$$ and time domain interval M 38. The Hamiltonian of the environment is expressed as $${H}_{E}={\sum }_{\xi =-\infty }^{\infty }\hslash {\omega }_{\xi }\mathrm{(1/2}+{b}_{\xi }^{\dagger }{b}_{\xi })$$, leading to the total free Hamiltonian for the system and environment

$${H}_{0}=\frac{1}{2}\hslash {{\rm{\Omega }}}_{0}{a}_{n}^{\dagger }{a}_{n}+\sum _{\xi =-{\rm{\infty }}}^{{\rm{\infty }}}\hslash {\omega }_{\xi }{b}_{\xi }^{\dagger }{b}_{\xi },$$
(10)

where the bosonic environment operators satisfy the usual commutation relations $$[{b}_{\xi },{b}_{{\xi }^{\text{'}}}^{\dagger }]={\delta }_{\xi {\xi }^{\text{'}}}$$ and where we neglect the zero-point energy term in the free system Hamiltonian. The coupling between the system and the environment is assumed to be at two spatial locations, and the interaction Hamiltonian is given in the framework of the rotating wave approximation by

$${H}_{SE}=\sum _{\xi }{\kappa }_{\xi }({b}_{\xi }{\sigma }^{+}+{b}_{\xi }^{\dagger }{\sigma }^{-}),$$
(11)

with $${\sigma }^{+}$$ and $${\sigma }^{-}$$ the pseudo-spin operators of a two-level system38. The coupling coefficients in this scenario (depicted in Fig. 1(b)) $${\kappa }_{\xi }=\sqrt{2{\gamma }_{0}/M}\,\cos (\bar{\xi }({\omega }_{\xi }\tau /2+{\varphi }_{0}))$$, with $$\overline{\xi }$$ denoting the sign of $$\xi$$ and M a time parameter describing the time interval that we will take the limit to infinity at the end, and $${\gamma }_{0}$$ the coupling parameter. The spectral density $$J(\omega )={\sum }_{\xi }|{\kappa }_{\xi }{|}^{2}\delta (\omega -{\omega }_{\xi })$$, and in the continuum limit, one get

$$J(\omega )=\frac{{\gamma }_{0}}{\pi }(1+\,\cos (\omega \tau +\varphi )),$$
(12)

for $$\omega > 0$$, and with $$\varphi =2{\varphi }_{0}$$. Substituting Eq. (12) in Eq. (9), one further get the dissipation kernel of the system, using a reverse Fourier transform, i.e.

$$f(t-t^{\prime} )={\gamma }_{0}({e}^{i\varphi }\delta (t-\tau -t^{\prime} )+2\delta (t-t^{\prime} )+{e}^{-i\varphi }\delta (t+\tau -t^{\prime} )).$$
(13)

Using this form for the dissipation kernel, it is straightforward to show that using Eq. (8), the time evolution of the system amplitude obeys the delay differential equation

$$\frac{d}{dt}c(t)=-i{\delta }_{0}c(t)\,-\,{\gamma }_{0}c(t)\,-\,\theta (t-\tau ){\gamma }_{0}{e}^{-i\varphi }c(t\,-\,\tau ),$$
(14)

with the right-side parameters normalized with respect to the Planck’s constant ħ, and $$\theta (t)$$ the Heaviside function. Also the detuning term $${\delta }_{0}$$ is assumed to be zero, i.e. the coupling between sites occurs only through their mutual coupling to the environment.

## Results

### Population beating and decoherence in the dimer system

We are now in a position to discuss the role played by time delay in the interaction between the two-level system (TLS) and the environment on the evolution of the populations dynamics and coherence, after initial excitation of the first site. Equation (14) can be solved analytically, by Fourier transforming it (in the frequency-domain) and extracting the eigenvalues. This class of differential equations is also known to possess an infinite number of complex eigenvalues, leading to some stability issues related to stiffness44,45. Here we solve it numerically using the delay differential equation solver of Matlab46, in order to obtain the relation between different parameters of the TLS and amplitudes.

Figure 2(a) plots the population of the donor site versus time lag $$\tau$$ and evolution time t, in the femtosecond range. One can see from this figure that population of site 1 undergoes several quantum oscillations (beating) in the time domain of study (1–2000 fs). The domain of these oscillations clearly increase as well as their period, with increasing values of $$\tau$$. The dashed white lines in Fig. 2(a) denote three specific values of the delay $$\tau$$, that are 50, 100, and 150 fs, and are plotted in Fig. 2(b,c) for the populations and decoherences, respectively. Here the decoherence is defined in the usual way as the off-diagonal term of the density matrix, or equivalently $$|{c}_{1}{(t)}^{\ast }{c}_{2}(t)|$$, with $${c}_{1}(t)$$ and $${c}_{2}(t)$$ the components of the total amplitude c, appearing in Eq. (14). For the smallest values of $$\tau$$ depicted at the bottom of Fig. 2(a) with the yellow color, the population has almost constant values close to 1, meaning that there is nearly no coupling between the sites. For appreciably higher values of $$\tau$$, one can see in Fig. 2(b) that the dynamics is considerably different, with the beatings becoming more pronounced as $$\tau$$ is increased from 50 to 150 fs. Similar effect can be observed in Fig. 2(c) for the decoherence rates where the quantum mechanical beatings live clearly longer due to higher delays that increase the interaction between the two sites via coherent feedback with the phononic bath environment. These oscillations can be interpreted in the following way: energy is transferred from the system into the environment during the positive regions of the decoherence and later re-emitted back towards the system at the negative regime of the decoherence rates47.

It should be mentioned that if the TLS reaches a steady state in which $$c(t\,-\,\tau )=c(t)$$ the decoupling will persist, and excitations can become trapped in the system-loop subsystem. This effect can be seen in Fig. 3 where populations and coherences are depicted for different values of the phase $$\varphi$$. In particular, for $$\varphi =\pi$$, destructive interference occurs and it corresponds to negative feedback effect, leading to stabilization of the donor site in a state of partial excitation (solid black curve in Fig. 3). In fact it is possible to show that the amplitude $$c(t)$$ solution of Eq. (14) tends to $$\mathrm{1/(1}+{\gamma }_{0}\tau )$$ if $$1+{e}^{i\varphi }=0$$ and to zero otherwise, when t goes to $$\infty$$. The other extreme scenario occurs thus when $$\varphi =0$$, i.e. for constructive interference, corresponding to positive feedback that increases the decay rate of the donor site and ultimately leads to its de-excitation as can be seen in Fig. 3 for the dashed green curve. The two other plots correspond to intermediate values of the phase, i.e. $$\varphi =\pi \mathrm{/4}$$ and $$\pi \mathrm{/2}$$, and one can see that in the interval 1–2000 fs, the decay of the population of site 1 is much lower than in the case of constructive interference.

These results show the importance of taking into account the role played by delay in the interaction of a TLS with phononic environment, in contrast to previous studies that only considered the effect of non-Markovianity40, the environment timescale48, and the temperature49.

To better illustrate the effect of environment feedback, the population of the donor site is given versus time and coupling constant $${\gamma }_{0}$$ in the domains 1–1000 fs and 0–2500 cm−1, respectively. These plots shown in Fig. 4(a–c) correspond to different values of the time delay, i.e. 0.01 fs (almost no delay), 10 fs (moderate delay), and 100 fs (high delay), respectively. From the first two graphs (note the different scale of the color map of both these plots), it is obvious that no noticeable oscillations occur in the given domains. This confirms that when the delay is very small, no quantum oscillation can occur naturally, except when the value of the coupling is chosen to be very high. In contrast, Fig. 4(c) shows the same results for higher value of the delay (100 fs) and the oscillations can be observed for almost all values of $${\gamma }_{0}$$. Figure 4(d) gives the population for coupled values of the delay time $$\tau$$ and coupling to the environment $${\gamma }_{0}$$. These results further confirm that in order to observe quantum oscillations and long-lived coherence (few hundreds of femstoseconds) for moderate values of $${\gamma }_{0}$$ (few hundreds of cm−1) one needs to tune the value of the delay accordingly. It should be also mentioned that in the case of small delay and high coupling (green dot-dashed curve of Fig. 4(d)) the oscillations die quicker than in the scenario of high delay and small coupling (black and red curves), even if the product $$\tau {\gamma }_{0}$$ is kept constant for both cases. This can be explained by the fact that the solution of the delay differential equation, i.e. Eq. (14) has its oscillations related to the delay $$\tau$$, so for higher values of $$\tau$$ the period is higher and the beats leave longer44,45.

## Discussion

In conclusion, we wish to emphasize the usefulness of taking into account the coherent feedback effect for modeling open quantum systems (e.g. a two-level system) interacting with a bosonic environment (e.g. a bath of phonons). In the simple example that we have considered in this work, i.e. a two-level system interacting with a phononic bath a two spatial locations, the role of delay was shown to be detrimental in the quantum beating and long-lived coherence. Although this model is very simple (described by Eq. (14)) one can gain from it considerable insight into the behavior of more complex system, e.g. the FMO molecules by extending it. In fact, we believe that such delay could have significant effect on the population quantum beatings of FMO systems, permitting thus to avoid unrealistically high values for the coupling to vibrational modes.

Publisher's note: Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.

## References

1. 1.

Blankenship, R. E. Molecular mechanisms of photosynthesis (John Wiley & Sons, 2013).

2. 2.

Engel, G. S. et al. Evidence for wavelike energy transfer through quantum coherence in photosynthetic systems. Nature 446, 782–786 (2007).

3. 3.

Collini, E. & Scholes, G. D. Coherent intrachain energy migration in a conjugated polymer at room temperature. science 323, 369–373 (2009).

4. 4.

Ishizaki, A. & Fleming, G. R. Theoretical examination of quantum coherence in a photosynthetic system at physiological temperature. Proceedings of the National Academy of Sciences 106, 17255–17260 (2009).

5. 5.

Mohseni, M., Rebentrost, P., Lloyd, S. & Aspuru-Guzik, A. Environment-assisted quantum walks in photosynthetic energy transfer. The Journal of chemical physics 129, 11B603 (2008).

6. 6.

Caruso, F., Chin, A. W., Datta, A., Huelga, S. F. & Plenio, M. B. Highly efficient energy excitation transfer in light-harvesting complexes: The fundamental role of noise-assisted transport. The Journal of Chemical Physics 131, 09B612 (2009).

7. 7.

Plenio, M. B. & Huelga, S. F. Dephasing-assisted transport: quantum networks and biomolecules. New Journal of Physics 10, 113019 (2008).

8. 8.

Ishizaki, A. & Fleming, G. R. On the adequacy of the redfield equation and related approaches to the study of quantum dynamics in electronic energy transfer. The Journal of chemical physics 130, 234110 (2009).

9. 9.

Wu, J., Liu, F., Shen, Y., Cao, J. & Silbey, R. J. Efficient energy transfer in light-harvesting systems, i: optimal temperature, reorganization energy and spatial–temporal correlations. New Journal of Physics 12, 105012 (2010).

10. 10.

Alharbi, F. H. & Kais, S. Theoretical limits of photovoltaics efficiency and possible improvements by intuitive approaches learned from photosynthesis and quantum coherence. Renewable and Sustainable Energy Reviews 43, 1073–1089 (2015).

11. 11.

Mohseni, M., Omar, Y., Engel, G. S. & Plenio, M. B. Quantum effects in biology (Cambridge University Press, 2014).

12. 12.

Jonas, D. M. Two-dimensional femtosecond spectroscopy. Annual review of physical chemistry 54, 425–463 (2003).

13. 13.

Brixner, T. et al. Two-dimensional spectroscopy of electronic couplings in photosynthesis. Nature 434, 625–628 (2005).

14. 14.

Fenna, R. & Matthews, B. Chlorophyll arrangement in a bacteriochlorophyll protein from chlorobium limicola. Nature 258, 573–577 (1975).

15. 15.

Yeh, S.-H. & Kais, S. Simulated two-dimensional electronic spectroscopy of the eight-bacteriochlorophyll fmo complex. The Journal of chemical physics 141, 12B645_1 (2014).

16. 16.

Tronrud, D. E., Wen, J., Gay, L. & Blankenship, R. E. The structural basis for the difference in absorbance spectra for the fmo antenna protein from various green sulfur bacteria. Photosynthesis research 100, 79–87 (2009).

17. 17.

Schulze, J. & Kuhn, O. Explicit correlated exciton-vibrational dynamics of the fmo complex. The Journal of Physical Chemistry B 119, 6211–6216 (2015).

18. 18.

van Grondelle, R., Dekker, J. P., Gillbro, T. & Sundstrom, V. Energy transfer and trapping in photosynthesis. Biochimica et Biophysica Acta (BBA)-Bioenergetics 1187, 1–65 (1994).

19. 19.

Tiwari, V., Peters, W. K. & Jonas, D. M. Electronic resonance with anticorrelated pigment vibrations drives photosynthetic energy transfer outside the adiabatic framework. Proceedings of the National Academy of Sciences 110, 1203–1208 (2013).

20. 20.

Strumpfer, J. & Schulten, K. Open quantum dynamics calculations with the hierarchy equations of motion on parallel computers. Journal of chemical theory and computation 8, 2808–2816 (2012).

21. 21.

Ishizaki, A., Calhoun, T. R., Schlau-Cohen, G. S. & Fleming, G. R. Quantum coherence and its interplay with protein environments in photosynthetic electronic energy transfer. Physical Chemistry Chemical Physics 12, 7319–7337 (2010).

22. 22.

Zhu, J., Kais, S., Rebentrost, P. & Aspuru-Guzik, A. Modified scaled hierarchical equation of motion approach for the study of quantum coherence in photosynthetic complexes. The Journal of Physical Chemistry B 115, 1531–1537 (2011).

23. 23.

Redfield, A. G. On the theory of relaxation processes. IBM Journal of Research and Development 1, 19–31 (1957).

24. 24.

Ishizaki, A. & Fleming, G. R. Unified treatment of quantum coherent and incoherent hopping dynamics in electronic energy transfer: Reduced hierarchy equation approach. The Journal of chemical physics 130, 234111 (2009).

25. 25.

Schröder, M., Kleinekathöfer, U. & Schreiber, M. Calculation of absorption spectra for light-harvesting systems using non-markovian approaches as well as modified redfield theory. The Journal of chemical physics 124, 084903 (2006).

26. 26.

Thorwart, M., Eckel, J., Reina, J. H., Nalbach, P. & Weiss, S. Enhanced quantum entanglement in the non-markovian dynamics of biomolecular excitons. Chemical Physics Letters 478, 234–237 (2009).

27. 27.

Rivas, A., Huelga, S. F. & Plenio, M. B. Quantum non-markovianity: characterization, quantification and detection. Reports on Progress in Physics 77, 094001 (2014).

28. 28.

Carmichael, H. An open systems approach to quantum optics: lectures presented at the Université Libre de Bruxelles, October 28 to November 4, 1991, vol. 18 (Springer Science & Business Media, 2009).

29. 29.

Breuer, H.-P. & Petruccione, F. The theory of open quantum systems (Oxford University Press on Demand, 2002).

30. 30.

Chen, Y., You, J. & Yu, T. Exact non-markovian master equations for multiple qubit systems: Quantum-trajectory approach. Physical Review A 90, 052104 (2014).

31. 31.

Chen, H.-B. et al. Using non-markovian measures to evaluate quantum master equations for photosynthesis. Scientific Reports 15 (2015).

32. 32.

Carmichael, H. Quantum trajectory theory for cascaded open systems. Physical review letters 70, 2273 (1993).

33. 33.

Gardiner, C. Driving a quantum system with the output field from another driven quantum system. Physical review letters 70, 2269 (1993).

34. 34.

Kolobov, M. & Sokolov, I. Quantum theory of light interaction with an optical amplifier. Optics and Spectroscopy 62, 69–73 (1987).

35. 35.

Lloyd, S. Coherent quantum feedback. Physical Review A 62, 022108 (2000).

36. 36.

Grimsmo, A. L., Parkins, A. & Skagerstam, B. Rapid steady-state convergence for quantum systems using time-delayed feedback control. New Journal of Physics 16, 065004 (2014).

37. 37.

Grimsmo, A. L. Time-delayed quantum feedback control. Physical review letters 115, 060402 (2015).

38. 38.

Whalen, S. Open quantum systems with time-delayed interactions. Ph.D. thesis, ResearchSpace@ Auckland (2015).

39. 39.

Eckel, J., Reina, J. H. & Thorwart, M. Coherent control of an effective two-level system in a non-markovian biomolecular environment. New Journal of Physics 11, 085001 (2009).

40. 40.

Rebentrost, P., Chakraborty, R. & Aspuru-Guzik, A. Non-markovian quantum jumps in excitonic energy transfer. The Journal of chemical physics 131, 11B605 (2009).

41. 41.

Pachón, L. A. & Brumer, P. Physical basis for long-lived electronic coherence in photosynthetic light-harvesting systems. The Journal of Physical Chemistry Letters 2, 2728–2732 (2011).

42. 42.

Zhang, Y., Wirthwein, A., Alharbi, F. H., Engel, G. S. & Kais, S. Dark states enhance the photocell power via phononic dissipation. Physical Chemistry Chemical Physics 18, 31845–31849 (2016).

43. 43.

Zhu, J. et al. Multipartite quantum entanglement evolution in photosynthetic complexes. The Journal of chemical physics 137, 074112 (2012).

44. 44.

Gopalsamy, K. Stability and oscillations in delay differential equations of population dynamics, vol. 74 (Springer Science & Business Media, 2013).

45. 45.

Bellen, A. & Zennaro, M. Numerical methods for delay differential equations (Oxford university press, 2013).

46. 46.
47. 47.

Rebentrost, P., Chakraborty, R. & Aspuru-Guzik, A. Non-markovian quantum jumps in excitonic energy transfer. The Journal of chemical physics 131, 11B605 (2009).

48. 48.

Dijkstra, A. G. & Tanimura, Y. The role of the environment time scale in light-harvesting efficiency and coherent oscillations. New Journal of Physics 14, 073027 (2012).

49. 49.

Qin-Sheng, Z., Chang-Chun, D., Shao-Yi, W. & Wei, L. Feedback of non-markovian quantum dynamics in dimer system: the effect of correlated environments and temperature. Communications in Theoretical Physics 64, 676 (2015).

## Acknowledgements

This work was funded by the Qatar National Research Fund (QNRF) through a National Priorities Research Program (NPRP) Exceptional grant, NPRP X-107-1-027. The authors wish also to thank anonymous reviewers for their constructive comments that helped improve the overall quality of this paper.

## Author information

### Affiliations

1. #### Qatar Environment and Energy Research Institute (QEERI), Hamad Bin Khalifa University, Qatar Foundation, Doha, Qatar

• M. Farhat
• , S. Kais
•  & F. H. Alharbi

• S. Kais
3. #### College of Science and Engineering, Hamad Bin Khalifa University, Doha, Qatar

• F. H. Alharbi

### Contributions

F.H.A. conceived the idea. M.F. conducted numerical simulations. F.H.A., S.K., and M.F. analyzed the results. All authors contributed in writing and reviewing the manuscript.

### Competing Interests

The authors declare that they have no competing interests.

### Corresponding author

Correspondence to M. Farhat.