Organization of the genome sequence of the polyploid crop species Brassica juncea

Access optionsAccess options

Rent or Buy article

Get time limited or full article access on ReadCube.

from$8.99

All prices are NET prices.

Fig. 1: Quality control assessment of genome sequence organization of B. juncea using genome-ordered graphical genotypes, chromosomes A1 and J1 as an example.

Data availability

The B. juncea mRNA-seq data used for production of the graphical genotypes have been deposited in the SRA data library under project ID PRJNA471033.

References

  1. 1.

    Yang, J. et al. Nat. Genet. 48, 1225–1232 (2016).

  2. 2.

    Trick, M., Long, Y., Meng, J. & Bancroft, I. Plant Biotechnol. J. 7, 334–346 (2009).

  3. 3.

    Bancroft, I. et al. Nat. Biotechnol. 29, 762–766 (2011).

  4. 4.

    Harper, A. L. et al. Nat. Biotechnol. 30, 798–802 (2012).

  5. 5.

    He, Z. et al. Data Brief 4, 357–362 (2015).

  6. 6.

    Paritosh, K. et al. BMC Genomics 15, 396 (2014).

  7. 7.

    He, Z. et al. Plant Biotechnol. J. 15, 594–604 (2017).

  8. 8.

    King, G. https://doi.org/10.4226/47/5afb8519d194c (2010).

Download references

Acknowledgements

This work was supported by the UK Biotechnology and Biological Sciences Research Council (BB/L002124/1, BB/L011751/1), including work carried out within the ERA-CAPS Research Program (BB/L027844/1). We would like to thank I. Parkin and A. Harper for their valuable comments on a draft of this manuscript.

Author information

Z.H. and I.B. designed the study and analyzed the data. I.B. wrote the manuscript and Z.H. read and approved the manuscript for publication.

Correspondence to Ian Bancroft.

Ethics declarations

Competing interests

The authors declare no competing interests.

Supplementary information

Supplementary Text and Figures

Supplementary Note, Supplementary Figure 1 and Supplementary Table 1.

Reporting Summary

Rights and permissions

Reprints and Permissions

About this article

Verify currency and authenticity via CrossMark

Further reading