Abstract
Herein, we screened a novel inhibitor of the Hsp70-Bim protein-protein interaction (PPI), S1g-2, from a Bcl-2 inhibitor library; this compound specifically disrupted the Hsp70-Bim PPI by direct binding to an unknown site adjacent to that of an allosteric Hsp70 inhibitor MKT-077, showing binding affinity in sub-μM concentration range. S1g-2 exhibited overall 5–10-fold higher apoptosis-inducing activity in CML cells, primary CML blasts, and BCR-ABL-transformed BaF3 cells than other cancer cells, normal lymphocytes, and BaF3 cells, illustrating Hsp70-Bim PPI driven by BCR-ABL protects CML through oncoclient proteins that enriched in three pathways: eIF2 signaling, the regulation of eIF4E and p70S6K signaling, and the mTOR signaling pathways. Moreover, S1g-2 progressively enhanced lethality along with the increase in BCR-ABL-independent TKI resistance in the K562 cell lines and is more effective in primary samples from BCR-ABL-independent TKI-resistant patients than those from TKI-sensitive patients. By comparing the underlying mechanisms of S1g-2, MKT-077, and an ATP-competitive Hsp70 inhibitor VER-155008, the Hsp70-Bim PPI was identified to be a CML-specific target to protect from TKIs through the above three oncogenic signaling pathways. The in vivo activity against CML and low toxicity endows S1g-2 a first-in-class promising drug candidate for both TKI-sensitive and resistant CML.
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Acknowledgements
Our NMR work was performed at the National Center for Protein Science Shanghai. We thank Bin Wu and Hongjuan Xue for the help at the facility. This research was supported by the National Natural Science Foundation of China (81903462 and 82073703), the China Postdoctoral Science Foundation (2018M641694), and the Fundamental Research Funds for the Central University (DUT20LK28 and DUT20YG133).
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TS and ZW performed FPA and ITC experiments, and analyzed data from drug sensitivity analysis, FPA, ITC, and iTRAQ-based quantitative proteomic data. Z.X collected blood sample from CML patients and healthy donors, and performed isolation and culture of blasts, lymphocytes and CD34 + CB cells analysis. TS and YG established K562 xenograft model and performed drug treatment experiments. TS, YG, ZG, and HZ performed co-immunoprecipitation (co-IP), immunoblotting, RT-PCR, and apoptosis assay. ZG contributed to establish of TKI-resistant cell lines. DL contributed to TROSY-HSQC NMR spectrum analysis. HP performed protein expression and purification. ZW, XZ, and HW contributed the synthesis of compounds and molecular docking. FY contributed to the preparation of heat-map data. ZZ conceived and designed the study, directed and supervised the research. ZZ and TS wrote the manuscript. All authors contributed to writing the paper and approved the final manuscript.
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Song, T., Guo, Y., Xue, Z. et al. Small-molecule inhibitor targeting the Hsp70-Bim protein–protein interaction in CML cells overcomes BCR-ABL-independent TKI resistance. Leukemia 35, 2862–2874 (2021). https://doi.org/10.1038/s41375-021-01283-5
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DOI: https://doi.org/10.1038/s41375-021-01283-5
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