Background: Mitochondrial damage and delayed cellular energy failure may be a cause of hypoxic cell death. Mt-DNA deletions are seen with ageing and in some neuro-degenerative diseases and may contribute to cell death.

Materials and methods: Human NT2-N neurons were exposed to hypoxia for 6 hours. Common deletion PCR (primers 8273-8305 and 13720-13692) and long PCR (primers 3470-3492 and 16379-16360) were performed after 48 hours when marked cell death was apparent. Nested PCR and Southern blots were done to verify the origin of the products.

Results: A positive control sample with a low level of mt-DNA deletions gave a strong band with common deletion PCR and multiple bands with long PCR. Nonhypoxic NT2-N cells gave no or only a faint band with common deletion PCR (40 cycles) and no increase was seen after hypoxia. Similar findings were obtained with long PCR.

Conclusion: Mt-DNA deletions are not involved in hypoxic cell death in the human NT2-N neuronal cell line.